Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Gm25239-201ENSMUST00000174915 86 ntBASIC36.58■■■■□ 3.45
SfpqQ8VIJ6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
SfpqQ8VIJ6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
SfpqQ8VIJ6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.11■■■■□ 3.21
SfpqQ8VIJ6 Psd-208ENSMUST00000224556 2034 ntBASIC33.97■■■■□ 3.03
SfpqQ8VIJ6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
SfpqQ8VIJ6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
SfpqQ8VIJ6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SfpqQ8VIJ6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
SfpqQ8VIJ6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SfpqQ8VIJ6 Gm15042-201ENSMUST00000120212 883 ntBASIC32.91■■■□□ 2.86
SfpqQ8VIJ6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SfpqQ8VIJ6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
SfpqQ8VIJ6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SfpqQ8VIJ6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SfpqQ8VIJ6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.51■■■□□ 2.79
SfpqQ8VIJ6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
SfpqQ8VIJ6 Gm15045-201ENSMUST00000117359 883 ntBASIC32.29■■■□□ 2.76
SfpqQ8VIJ6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
SfpqQ8VIJ6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SfpqQ8VIJ6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
SfpqQ8VIJ6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
SfpqQ8VIJ6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SfpqQ8VIJ6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SfpqQ8VIJ6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SfpqQ8VIJ6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SfpqQ8VIJ6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
SfpqQ8VIJ6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.53■■■□□ 2.64
SfpqQ8VIJ6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
SfpqQ8VIJ6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SfpqQ8VIJ6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.38■■■□□ 2.61
SfpqQ8VIJ6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SfpqQ8VIJ6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SfpqQ8VIJ6 Gm24109-201ENSMUST00000175489 103 ntBASIC31.23■■■□□ 2.59
SfpqQ8VIJ6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
SfpqQ8VIJ6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SfpqQ8VIJ6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.1■■■□□ 2.57
SfpqQ8VIJ6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SfpqQ8VIJ6 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.93■■■□□ 2.54
SfpqQ8VIJ6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.87■■■□□ 2.53
SfpqQ8VIJ6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SfpqQ8VIJ6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SfpqQ8VIJ6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
SfpqQ8VIJ6 Gm23366-201ENSMUST00000175022 89 ntBASIC30.72■■■□□ 2.51
SfpqQ8VIJ6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SfpqQ8VIJ6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SfpqQ8VIJ6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SfpqQ8VIJ6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SfpqQ8VIJ6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.42■■■□□ 2.46
SfpqQ8VIJ6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SfpqQ8VIJ6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SfpqQ8VIJ6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.24■■■□□ 2.43
SfpqQ8VIJ6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SfpqQ8VIJ6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
SfpqQ8VIJ6 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.19■■■□□ 2.42
SfpqQ8VIJ6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SfpqQ8VIJ6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SfpqQ8VIJ6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
SfpqQ8VIJ6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.05■■■□□ 2.4
SfpqQ8VIJ6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
SfpqQ8VIJ6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SfpqQ8VIJ6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
SfpqQ8VIJ6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SfpqQ8VIJ6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SfpqQ8VIJ6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SfpqQ8VIJ6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
SfpqQ8VIJ6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SfpqQ8VIJ6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
SfpqQ8VIJ6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
SfpqQ8VIJ6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SfpqQ8VIJ6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
SfpqQ8VIJ6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
SfpqQ8VIJ6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SfpqQ8VIJ6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.55■■■□□ 2.32
SfpqQ8VIJ6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SfpqQ8VIJ6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SfpqQ8VIJ6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
SfpqQ8VIJ6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SfpqQ8VIJ6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SfpqQ8VIJ6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SfpqQ8VIJ6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
SfpqQ8VIJ6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.26■■■□□ 2.28
SfpqQ8VIJ6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SfpqQ8VIJ6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.23■■■□□ 2.27
SfpqQ8VIJ6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
SfpqQ8VIJ6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SfpqQ8VIJ6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
SfpqQ8VIJ6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SfpqQ8VIJ6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SfpqQ8VIJ6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
SfpqQ8VIJ6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SfpqQ8VIJ6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
SfpqQ8VIJ6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SfpqQ8VIJ6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
SfpqQ8VIJ6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SfpqQ8VIJ6 Gm27325-201ENSMUST00000175467 74 ntBASIC29■■■□□ 2.23
SfpqQ8VIJ6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SfpqQ8VIJ6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
SfpqQ8VIJ6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
SfpqQ8VIJ6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms