RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 Catsper2A2ARP9 588 aa20.68■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Terf2O35144 541 aa20.68■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Map3k13Q1HKZ5 959 aa20.68■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Afg3l2Q8JZQ2 802 aaKnown RBP20.68■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Col4a1P02463 1669 aa20.67■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Ddx58Q6Q899 926 aa20.67■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Nip7Q9CXK8 180 aaKnown RBP20.67■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 MypnQ5DTJ9 1315 aa20.67■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Hspa2P17156 633 aa20.66■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Atp8b2P98199 1209 aa20.66■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Lrit1Q8K099 624 aa20.66■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Nom1Q3UFM5 854 aaKnown RBP20.66■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Gnl3lQ6PGG6 577 aaKnown RBP20.66■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Lmbr1lQ9D1E5 489 aa20.66■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 MetP16056 1379 aa20.65■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Mum1Q6DID5 682 aa20.65■□□□□ 0.9
Hoxc4-202ENSMUST00000165375 Grm8P47743 908 aa20.64■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Kndc1Q0KK55 1742 aa20.64■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Sos2Q02384 1333 aa20.63■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Ppp6r1Q7TSI3 856 aa20.63■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Srgap3Q812A2 1099 aa20.63■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Miga2Q8BK03 593 aa20.63■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Ppp1r42Q8R1Z4 357 aa20.63■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Kiaa0319lQ8K135 1048 aa20.63■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Cwc27Q3TKY6 469 aa20.62■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Eif4g2Q62448 906 aaKnown RBP20.62■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Fkbp5Q64378 456 aa20.62■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Zbtb1Q91VL9 713 aa20.62■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 CarsQ9ER72 831 aaKnown RBP20.62■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Ric1Q69ZJ7 1422 aa20.62■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 ScaperF8VQ70 1398 aaKnown RBP20.62■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Bicdl1A0JNT9 577 aa20.62■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 LifrP42703 1092 aa20.62■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Ripor2Q80U16 1078 aa20.62■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Arhgap33Q80YF9 1305 aa20.61■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Tceal9Q9DD24 104 aa20.61■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Abca3Q8R420 1704 aa20.61■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Plcb2A3KGF7 1181 aa20.6■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Prr29B1ARI9 187 aa20.6■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Ddx60E9PZQ1 1711 aa20.6■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Map7O88735 730 aa20.6■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Tlr7P58681 1050 aa20.59■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 AbraQ8BUZ1 375 aa20.59■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Cetn4Q8K4K1 168 aa20.59■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Nphp1Q9QY53 687 aa20.59■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 AK157302I3ITR1 129 aa20.59■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Ier5O89113 308 aa20.59■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Aldh8a1Q8BH00 487 aa20.59■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Isca1Q9D924 129 aa20.59■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Rapgef4Q9EQZ6 1011 aa20.59■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 GalcP54818 684 aa20.58■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Cgnl1Q6AW69 1298 aa20.58■□□□□ 0.89
Hoxc4-202ENSMUST00000165375 Rsph3aQ3UFY4 516 aa20.57■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Soga3Q6NZL0 945 aa20.57■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Pdcl2Q78Y63 240 aa20.57■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Nlrp3Q8R4B8 1033 aa20.57■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Stard3nlQ9DCI3 235 aa20.57■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Mfap1aC0HKD8 439 aaKnown RBP20.57■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Mfap1bC0HKD9 439 aaKnown RBP20.57■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Brd1E9PZ26 1189 aaKnown RBP20.57■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Mmp8O70138 465 aa20.57■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Kif2cQ922S8 721 aa20.57■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 NmiO35309 314 aa20.56■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Fbln2P37889 1221 aa20.56■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Smarcc1P97496 1104 aa20.56■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Ankib1Q6ZPS6 1085 aa20.56■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 FanclQ9CR14 375 aa20.56■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Cwc25Q9DBF7 416 aa20.56■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Myd88P22366 296 aa20.56■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Ehd4Q9EQP2 541 aa20.56■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Ltb4r2Q9JJL9 360 aa20.56■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Ubap1lG3UW59 384 aa20.55■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Ddit3P35639 168 aa20.55■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Tgfb1i1Q62219 461 aa20.55■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Sugp2Q8CH09 1067 aa20.55■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Prr5lA2AVJ5 370 aa20.54■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Gcc1Q9D4H2 778 aa20.54■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 SlkO54988 1233 aa20.54■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Slc4a10Q5DTL9 1118 aa20.54■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Mcmdc2E9Q956 681 aa20.53■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Gnat3Q3V3I2 354 aa20.53■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Kiaa0319Q5SZV5 1081 aa20.53■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Q8BT18 775 aa20.53■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 VgfQ0VGU4 617 aa20.52■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Esco1Q69Z69 843 aa20.52■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Ly75Q60767 1723 aa20.52■□□□□ 0.88
Hoxc4-202ENSMUST00000165375 Sipa1l3G3X9J0 1776 aa20.51■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Dhx16G3X8X0 1044 aaKnown RBP20.51■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Kif18aQ91WD7 886 aa20.51■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Gm13023A2A8N2 498 aa20.51■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Gm10093D3YYI8 482 aa20.51■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Hdac1O09106 482 aaKnown RBP20.51■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Mcm2P97310 904 aa20.51■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Gse1Q3U3C9 1213 aa20.51■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Lrrc43Q3V0L5 667 aa20.51■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Nlrp9bQ66X22 1003 aa20.51■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Smarca5Q91ZW3 1051 aaKnown RBP20.51■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Fam213aQ9CYH2 218 aa20.51■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Fkbp1aP26883 108 aaKnown RBP20.5■□□□□ 0.87
Hoxc4-202ENSMUST00000165375 Ank1Q02357 1862 aa20.5■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms