RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 PtprgQ05909 1442 aa20.62■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Lrrc9Q8CDN9 1456 aa20.62■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Cep120Q7TSG1 988 aa20.62■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Atp8b3Q6UQ17 1335 aa20.61■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Sdc2P43407 202 aa20.61■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Adgrl2Q8JZZ7 1487 aa20.61■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Ankle2Q6P1H6 964 aa20.61■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Tshz3Q8CGV9 1081 aa20.61■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Ccne1Q61457 408 aa20.6■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Il1rapl2Q9ERS6 686 aa20.6■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Mcmdc2E9Q956 681 aa20.6■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Bloc1s4Q8VED2 215 aa20.6■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Tbc1d8Q9Z1A9 1134 aa20.6■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Chd1lQ9CXF7 900 aa20.59■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Map3k2Q61083 619 aa20.59■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Tmem266Q8BZB3 538 aa20.59■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Ctage5Q8R311 779 aa20.59■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Sytl4Q9R0Q1 673 aa20.59■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Lmtk2Q3TYD6 1471 aa20.59■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Cfap74Q3UY96 1578 aa20.59■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Snx13Q6PHS6 957 aa20.59■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Akap2O54931 893 aa20.58■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Cct2P80314 535 aaKnown RBP20.58■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Ppp1r10Q80W00 888 aaKnown RBP20.58■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Gng11P61953 73 aa20.58■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Soga3Q6NZL0 945 aa20.58■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Ces1hD3Z298 562 aa20.58■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Tubb5P99024 444 aaKnown RBP20.58■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Hdgfl1Q2VPR5 283 aa20.58■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Cetn2Q9R1K9 172 aa20.58■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Dapk3O54784 448 aa20.58■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Bbof1Q3V079 533 aa20.58■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Vps18Q8R307 973 aa20.58■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Kdm3bQ6ZPY7 1562 aa20.57■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Sil1Q9EPK6 465 aa20.57■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Gm21985Q6P6P5 1106 aa20.57■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Nol11Q8BJW5 723 aaKnown RBP20.57■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Grpel1Q99LP6 217 aa20.57■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Rbm8a2A0A0N4SUH6 174 aa20.57■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Vamp4O70480 141 aa20.57■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Rbm8aQ9CWZ3 174 aa20.57■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Slx4ipQ9D7Y9 413 aa20.57■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 CebpzP53569 1052 aaKnown RBP20.56■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Tyro3P55144 880 aa20.56■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Znf653Q6YND2 615 aa20.56■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Syt10Q9R0N4 523 aa20.56■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Ccdc12Q8R344 166 aaKnown RBP20.56■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Calml4Q91WQ9 153 aa20.56■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Ankrd50F7BE84 1390 aa20.56■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Fam76aQ922G2 307 aa20.56■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Uchl5Q9WUP7 329 aa20.56■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Ncapd2Q8K2Z4 1392 aa20.55■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Metap2O08663 478 aaKnown RBP20.55■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Tnni2P13412 182 aa20.55■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Ctr9Q62018 1173 aaKnown RBP20.55■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Galntl5Q9D4M9 431 aa20.55■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Znf131Q8K3J5 619 aa20.55■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Krt25Q8VCW2 446 aa20.55■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Nol7Q9D7Z3 254 aaKnown RBP20.55■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Sycp2lA0A0M3U1B0 842 aa20.54■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 NgdnQ9DB96 315 aaKnown RBP20.54■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Bin1O08539 588 aaKnown RBP20.54■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Smarcc1P97496 1104 aa20.54■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 IkQ9Z1M8 557 aaKnown RBP20.54■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Fbf1A2A870 1173 aa20.54■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Serpinb6bO08804 377 aa20.54■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Tbc1d2bQ3U0J8 965 aa20.54■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Ppp4r3aQ6P2K6 820 aa20.54■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Cnga2Q62398 664 aa20.53■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Pde3aQ9Z0X4 1141 aa20.53■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Esyt1Q3U7R1 1092 aaKnown RBP20.53■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Golim4Q8BXA1 655 aa20.53■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Slc5a1Q8C3K6 665 aa20.53■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Clcn1Q64347 994 aa20.53■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Serpina10Q8R121 448 aa20.53■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 ApobrQ8VBT6 942 aa20.53■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Ssh2Q5SW75 1423 aa20.52■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Gm10563F6WIE4 79 aa20.52■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Rnf34Q99KR6 376 aa20.52■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Zscan29E9Q5B4 869 aa20.52■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 AU019823E9PUQ3 292 aa20.52■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Myd88P22366 296 aa20.52■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Pde4dQ01063 747 aa20.52■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Zkscan4Q5SZT6 480 aa20.52■□□□□ 0.88
Col4a3bp-202ENSMUST00000109444 Pde4bB1AWC9 736 aa20.52■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Map2k1P31938 393 aa20.52■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Cdan1Q8CC12 1239 aa20.52■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Ssr1Q9CY50 286 aaKnown RBP20.52■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Cwc25Q9DBF7 416 aa20.52■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Tbc1d8bA3KGB4 1114 aa20.51■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Hook3Q8BUK6 718 aa20.51■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Prim1P20664 417 aa20.51■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Syt1P46096 421 aa20.51■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Paf1Q8K2T8 535 aa20.51■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Irx4Q9QY61 515 aa20.51■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Skint5A7XUY5 1461 aa20.51■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Mcm10Q0VBD2 885 aa20.51■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 Ift88Q61371 824 aa20.51■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 TrdnE9Q9K5 693 aa20.5■□□□□ 0.87
Col4a3bp-202ENSMUST00000109444 U2af1l4Q8BGJ9 220 aa20.5■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 39.3 ms