RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Zap70P43404 618 aa28.24■■■□□ 2.11
Scn1b-201ENSMUST00000098548 SkilQ60665 675 aa28.24■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Ankib1Q6ZPS6 1085 aa28.24■■■□□ 2.11
Scn1b-201ENSMUST00000098548 CpzQ8R4V4 654 aa28.24■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Dbr1Q923B1 550 aa28.24■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Ltb4r2Q9JJL9 360 aa28.24■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Fgd1P52734 960 aa28.22■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Ifit1bl2Q3U687 466 aa28.22■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Cetn4Q8K4K1 168 aa28.21■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Plch1Q4KWH5 1682 aa28.21■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Ppp2r3aB2RXC8 1150 aa28.2■■■□□ 2.11
Scn1b-201ENSMUST00000098548 Map3k13Q1HKZ5 959 aa28.2■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Cgnl1Q6AW69 1298 aa28.2■■■□□ 2.1
Scn1b-201ENSMUST00000098548 AK157302I3ITR1 129 aa28.19■■■□□ 2.1
Scn1b-201ENSMUST00000098548 SowahdQ8BY98 327 aa28.19■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Isca1Q9D924 129 aa28.19■■■□□ 2.1
Scn1b-201ENSMUST00000098548 ScaperF8VQ70 1398 aaKnown RBP28.19■■■□□ 2.1
Scn1b-201ENSMUST00000098548 HellsQ60848 821 aa28.18■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Ddx58Q6Q899 926 aa28.18■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Col23a1Q8K4G2 532 aa28.18■■■□□ 2.1
Scn1b-201ENSMUST00000098548 NgdnQ9DB96 315 aaKnown RBP28.18■■■□□ 2.1
Scn1b-201ENSMUST00000098548 NmiO35309 314 aa28.17■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Cfdp1O88271 295 aaKnown RBP28.17■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Fkbp5Q64378 456 aa28.17■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Cluap1Q8R3P7 413 aa28.17■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Sned1Q70E20 1403 aa28.17■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Ubn2Q80WC1 1314 aa28.17■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Cyp2c23E9Q5K4 494 aa28.16■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Zfyve9A2A8R0 1397 aa28.16■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Myd88P22366 296 aa28.16■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Phf23Q8BSN5 401 aa28.16■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Lmbr1lQ9D1E5 489 aa28.16■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Slurp2P0DP59 97 aa28.15■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Tm6sf1P58749 370 aa28.15■■■□□ 2.1
Scn1b-201ENSMUST00000098548 1810065E05RikQ5NC41 235 aa28.15■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Emilin1Q99K41 1017 aa28.15■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Dctn1O08788 1281 aa28.14■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Hoxa7P02830 229 aa28.14■■■□□ 2.1
Scn1b-201ENSMUST00000098548 AbraQ8BUZ1 375 aa28.14■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Tmc1Q8R4P5 757 aa28.14■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Armcx1Q9CX83 456 aa28.14■■■□□ 2.1
Scn1b-201ENSMUST00000098548 KnstrnQ9D9Z1 312 aaKnown RBP28.14■■■□□ 2.1
Scn1b-201ENSMUST00000098548 Ankrd31A0A140LI88 1765 aa28.14■■■□□ 2.1
Scn1b-201ENSMUST00000098548 AtrnQ9WU60 1428 aa28.13■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Prom2Q3UUY6 835 aa28.13■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Fkbp1aP26883 108 aaKnown RBP28.12■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Soga3Q6NZL0 945 aa28.12■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Ripor2Q80U16 1078 aa28.12■■■□□ 2.09
Scn1b-201ENSMUST00000098548 IncenpQ9WU62 880 aa28.12■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Phlpp2Q8BXA7 1320 aa28.12■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Arap2Q8BZ05 1703 aa28.12■■■□□ 2.09
Scn1b-201ENSMUST00000098548 LifrP42703 1092 aa28.11■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Trim34aQ99PP6 485 aa28.11■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Susd4Q8BH32 490 aa28.11■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Mapk8ip1Q9WVI9 707 aa28.11■■■□□ 2.09
Scn1b-201ENSMUST00000098548 AU019823E9PUQ3 292 aa28.1■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Trim30dE9PWL0 497 aa28.1■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Igflr1Q3U4N7 345 aa28.1■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Cwc25Q9DBF7 416 aa28.1■■■□□ 2.09
Scn1b-201ENSMUST00000098548 PsdQ5DTT2 1024 aa28.09■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Rbm26Q6NZN0 1012 aaKnown RBP28.09■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Ipo9Q91YE6 1041 aa28.09■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Stox1B2RQL2 990 aa28.08■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Zc3h12cQ5DTV4 884 aa28.08■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Eif4g2Q62448 906 aaKnown RBP28.08■■■□□ 2.09
Scn1b-201ENSMUST00000098548 ErfeQ6PGN1 340 aa28.08■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Ipo8Q7TMY7 1010 aa28.08■■■□□ 2.09
Scn1b-201ENSMUST00000098548 Stk36Q69ZM6 1316 aa28.08■■■□□ 2.09
Scn1b-201ENSMUST00000098548 CltaO08585 235 aa28.07■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Mcm2P97310 904 aa28.07■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Mrc1Q61830 1456 aa28.07■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Togaram1Q6A070 1776 aaKnown RBP28.07■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Ehd4Q9EQP2 541 aa28.07■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Gnai2P08752 355 aaKnown RBP28.07■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Prkar2bP31324 416 aa28.07■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Sart3Q9JLI8 962 aaKnown RBP28.07■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Trpc5Q9QX29 975 aa28.07■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Npy5rO70342 466 aa28.06■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Trim27Q62158 513 aa28.06■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Aldh8a1Q8BH00 487 aa28.06■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Egfem1Q8C088 590 aa28.06■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Gcc1Q9D4H2 778 aa28.06■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Stard3nlQ9DCI3 235 aa28.06■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Ccdc183A2AJB1 534 aa28.05■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Cyp19a1P28649 503 aa28.05■■■□□ 2.08
Scn1b-201ENSMUST00000098548 CanxP35564 591 aaKnown RBP28.05■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Grm8P47743 908 aa28.05■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Rtkn2Q14B46 604 aa28.05■■■□□ 2.08
Scn1b-201ENSMUST00000098548 GptQ8QZR5 496 aa28.05■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Lrp5Q91VN0 1614 aa28.04■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Brd1E9PZ26 1189 aaKnown RBP28.04■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Ccdc27Q3V036 639 aa28.04■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Arid3aQ62431 601 aa28.04■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Triml2E9PW10 424 aa28.03■■■□□ 2.08
Scn1b-201ENSMUST00000098548 CarsQ9ER72 831 aaKnown RBP28.03■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Zswim8Q3UHH1 1832 aaKnown RBP28.03■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Tlr7P58681 1050 aa28.03■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Gimap8Q75N62 688 aa28.03■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Clca2Q8BG22 942 aa28.03■■■□□ 2.08
Scn1b-201ENSMUST00000098548 Dbndd1Q9CZ00 160 aa28.03■■■□□ 2.08
Retrieved 100 of 22,080 RNA–protein pairs in 526.1 ms