RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 Pde3bQ61409 1100 aa20.85■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Ptpdc1Q6NZK8 747 aa20.85■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Bcar3Q9QZK2 820 aa20.85■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Cntnap1O54991 1385 aa20.84■□□□□ 0.93
Rpf1-201ENSMUST00000029838 AK157302I3ITR1 129 aa20.84■□□□□ 0.93
Rpf1-201ENSMUST00000029838 GpkowQ56A08 488 aa20.84■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Nyap1Q6PFX7 833 aa20.84■□□□□ 0.93
Rpf1-201ENSMUST00000029838 NexnQ7TPW1 607 aa20.84■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Nlrp3Q8R4B8 1033 aa20.84■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Noc3lQ8VI84 807 aaKnown RBP20.84■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Isca1Q9D924 129 aa20.84■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Hspa2P17156 633 aa20.83■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Nkx1-2P42580 305 aa20.83■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Nlrp9bQ66X22 1003 aa20.83■□□□□ 0.93
Rpf1-201ENSMUST00000029838 MypopQ8R4U1 393 aa20.83■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Abcc4E9Q236 1325 aa20.83■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Sos2Q02384 1333 aa20.83■□□□□ 0.93
Rpf1-201ENSMUST00000029838 Kndc1Q0KK55 1742 aa20.83■□□□□ 0.92
Rpf1-201ENSMUST00000029838 NmiO35309 314 aa20.83■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Ankib1Q6ZPS6 1085 aa20.83■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Fam213aQ9CYH2 218 aa20.83■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Rapgef4Q9EQZ6 1011 aa20.83■□□□□ 0.92
Rpf1-201ENSMUST00000029838 InsrrQ9WTL4 1300 aa20.82■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Nhsl1Q8CAF4 1587 aa20.82■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Zbtb3Q91X45 518 aa20.81■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Kiaa0232Q80U59 1396 aaKnown RBP20.81■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Clcn1Q64347 994 aa20.8■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Hmox1P14901 289 aa20.8■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Erc2Q6PH08 957 aa20.8■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Ric1Q69ZJ7 1422 aa20.79■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Pdia3P27773 505 aaKnown RBP20.79■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Pa2g4P50580 394 aaKnown RBP20.79■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Eif2s2Q99L45 331 aaKnown RBP20.79■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Rbm27Q5SFM8 1060 aaKnown RBP20.78■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Q8C5K5 320 aa20.78■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Q9D2X8 372 aa20.78■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Ltb4r2Q9JJL9 360 aa20.78■□□□□ 0.92
Rpf1-201ENSMUST00000029838 ChgaP26339 463 aaKnown RBP20.77■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Mrc1Q61830 1456 aa20.77■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Col4a1P02463 1669 aa20.77■□□□□ 0.92
Rpf1-201ENSMUST00000029838 Ank1Q02357 1862 aa20.77■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Nucb1Q02819 459 aaKnown RBP20.77■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Nol10Q5RJG1 687 aaKnown RBP20.77■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Zbtb1Q91VL9 713 aa20.77■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Sipa1l3G3X9J0 1776 aa20.76■□□□□ 0.91
Rpf1-201ENSMUST00000029838 4930523C07RikE9Q2T4 99 aa20.76■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Prl3d2F6R3P9 224 aa20.76■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Fkbp1aP26883 108 aaKnown RBP20.76■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Ppp1r9bQ6R891 817 aaKnown RBP20.76■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Sgsm1Q8BPQ7 1093 aa20.76■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Sf3a1Q8K4Z5 791 aaKnown RBP20.76■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Adora1Q60612 326 aa20.75■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Bsdc1Q80Y55 427 aa20.75■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Taok3Q8BYC6 898 aa20.75■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Zcrb1Q9CZ96 217 aaKnown RBP20.75■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Ppp4r3aQ6P2K6 820 aa20.74■□□□□ 0.91
Rpf1-201ENSMUST00000029838 RestQ8VIG1 1082 aa20.74■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Ppp6r3Q922D4 844 aa20.74■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Prl3d3A0A0M6L0J6 224 aa20.73■□□□□ 0.91
Rpf1-201ENSMUST00000029838 AppP12023 770 aa20.73■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Ppip5k2Q6ZQB6 1129 aa20.73■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Ttc19Q8CC21 365 aa20.73■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Sptbn5F6UCX4 1208 aa20.73■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Fnbp4Q6ZQ03 1031 aa20.73■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Miga2Q8BK03 593 aa20.73■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Afg3l2Q8JZQ2 802 aaKnown RBP20.73■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Ltbp1Q8CG19 1712 aa20.72■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Tpx2A2APB8 745 aaKnown RBP20.72■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Esco1Q69Z69 843 aa20.72■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Prr5lA2AVJ5 370 aa20.71■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Hsp90b1P08113 802 aaKnown RBP20.71■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Bag3Q9JLV1 577 aaKnown RBP20.71■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Tbc1d4Q8BYJ6 1307 aa20.71■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Bicdl1A0JNT9 577 aa20.7■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Gm10093D3YYI8 482 aa20.7■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Hdac1O09106 482 aaKnown RBP20.7■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Plcb3P51432 1234 aaKnown RBP20.7■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Nlrp1aQ2LKU9 1182 aa20.7■□□□□ 0.91
Rpf1-201ENSMUST00000029838 Trim34aQ99PP6 485 aa20.7■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Arap2Q8BZ05 1703 aa20.69■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Hmgb2P30681 210 aaKnown RBP20.69■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Smarcc1P97496 1104 aa20.69■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Slf2Q6P9P0 1278 aa20.69■□□□□ 0.9
Rpf1-201ENSMUST00000029838 GorabQ8BRM2 368 aa20.69■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Rhot2Q8JZN7 620 aa20.69■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Kiaa0319lQ8K135 1048 aa20.69■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Slc26a8Q8R0C3 999 aa20.69■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Abca3Q8R420 1704 aa20.68■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Ppfibp2O35711 882 aa20.68■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Sult6b1P0CC03 303 aa20.68■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Tnpo1Q8BFY9 898 aaKnown RBP20.68■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Clca2Q8BG22 942 aa20.68■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Chmp3Q9CQ10 224 aa20.68■□□□□ 0.9
Rpf1-201ENSMUST00000029838 GakQ99KY4 1305 aa20.68■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Lrrc43Q3V0L5 667 aa20.67■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Taf5lQ91WQ5 589 aa20.67■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Ssc5dQ8BV57 1371 aa20.67■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Cops6O88545 324 aa20.67■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Neurod6P48986 337 aa20.67■□□□□ 0.9
Rpf1-201ENSMUST00000029838 Mctp2Q5RJH2 878 aa20.67■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms