RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 SERPINI1Q99574 410 aa10.36□□□□□ -0.75
DDB1-222ENST00000543627 WDR77Q9BQA1 342 aaPredicted RBP10.36□□□□□ -0.75
DDB1-222ENST00000543627 ALOXE3Q9BYJ1 711 aa10.36□□□□□ -0.75
DDB1-222ENST00000543627 ROPN1BQ9BZX4 212 aaPredicted RBP10.36□□□□□ -0.75
DDB1-222ENST00000543627 CDCP1Q9H5V8 836 aa10.36□□□□□ -0.75
DDB1-222ENST00000543627 ROPN1Q9HAT0 212 aaPredicted RBP10.36□□□□□ -0.75
DDB1-222ENST00000543627 MID1IP1Q9NPA3 183 aa10.36□□□□□ -0.75
DDB1-222ENST00000543627 AHSPQ9NZD4 102 aa10.36□□□□□ -0.75
DDB1-222ENST00000543627 TEKT2Q9UIF3 430 aa10.36□□□□□ -0.75
DDB1-222ENST00000543627 EMCNQ9ULC0 261 aa10.36□□□□□ -0.75
DDB1-222ENST00000543627 B3GNT3Q9Y2A9 372 aa10.36□□□□□ -0.75
DDB1-222ENST00000543627 FIS1Q9Y3D6 152 aa10.36□□□□□ -0.75
DDB1-222ENST00000543627 MMACHCQ9Y4U1 282 aa10.36□□□□□ -0.75
DDB1-222ENST00000543627 TIMM22Q9Y584 194 aa10.36□□□□□ -0.75
DDB1-222ENST00000543627 TRBV11-1A0A0K0K1C0 115 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 WASHC1A8K0Z3 465 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 G3V2L1 256 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 FOXE1O00358 373 aaPredicted RBP10.35□□□□□ -0.75
DDB1-222ENST00000543627 CYR61O00622 381 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 PLIN3O60664 434 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 CTNSO60931 367 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 VPS4BO75351 444 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 MLYCDO95822 493 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 WDPCPO95876 746 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 KRT6AP02538 564 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 KRT6BP04259 564 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 CYC1P08574 325 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 NUDT17P0C025 328 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 FAM58BPP0C7Q3 252 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 KRT6CP48668 564 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 HSD17B7P56937 341 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 OC90Q02509 493 aaPredicted RBP10.35□□□□□ -0.75
DDB1-222ENST00000543627 KCNC4Q03721 635 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 PCDH1Q08174 1060 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 E2F2Q14209 437 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 RASA2Q15283 850 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 INPP5JQ15735 1006 aaPredicted RBP10.35□□□□□ -0.75
DDB1-222ENST00000543627 CCNYL2Q5T2Q4 361 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 PLAG1Q6DJT9 500 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 ZYG11AQ6WRX3 759 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 HPS6Q86YV9 775 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 CNPY4Q8N129 248 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 SUN3Q8TAQ9 357 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 M1APQ8TC57 530 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 PSMF1Q92530 271 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 PNPLA2Q96AD5 504 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 PPWD1Q96BP3 646 aaKnown RBP10.35□□□□□ -0.75
DDB1-222ENST00000543627 CCDC126Q96EE4 140 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 C19orf60Q96EN9 201 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 ZNF354BQ96LW1 612 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 FAM111AQ96PZ2 611 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 KCNA7Q96RP8 456 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 LMF1Q96S06 567 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 MRPL1Q9BYD6 325 aaKnown RBP10.35□□□□□ -0.75
DDB1-222ENST00000543627 DEFB126Q9BYW3 111 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 RPF2Q9H7B2 306 aaKnown RBP10.35□□□□□ -0.75
DDB1-222ENST00000543627 LIN28AQ9H9Z2 209 aaKnown RBP10.35□□□□□ -0.75
DDB1-222ENST00000543627 LYRM4Q9HD34 91 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 KCMF1Q9P0J7 381 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 ABI3Q9P2A4 366 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 PHF11Q9UIL8 331 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 VPS4AQ9UN37 437 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 ATG4BQ9Y4P1 393 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 CLCA3PQ9Y6N3 262 aa10.35□□□□□ -0.75
DDB1-222ENST00000543627 DOCK10Q96BY6 2186 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 TCRBV16S1A1N1A0A5B0 115 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 SAGE2PA6NJ88 616 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 TGFBR3LH3BV60 316 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 MANBAO00462 879 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 RGS16O15492 202 aaPredicted RBP10.34□□□□□ -0.75
DDB1-222ENST00000543627 TMPRSS11DO60235 418 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 ULK1O75385 1050 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 ESRRBO95718 433 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 SERPINB3P29508 390 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 BUD31P41223 144 aaPredicted RBP10.34□□□□□ -0.75
DDB1-222ENST00000543627 HNRNPH2P55795 449 aaKnown RBP10.34□□□□□ -0.75
DDB1-222ENST00000543627 SRSF11Q05519 484 aaKnown RBP10.34□□□□□ -0.75
DDB1-222ENST00000543627 SLC18A2Q05940 514 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 CUL3Q13618 768 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 MEP1AQ16819 746 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 SPDYAQ5MJ70 313 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 ACER2Q5QJU3 275 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 CEP85LQ5SZL2 805 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 SH2D5Q6ZV89 423 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 CUZD1Q86UP6 607 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 TRABD2AQ86V40 505 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 NUDT13Q86X67 352 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 CRLF3Q8IUI8 442 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 C10orf107Q8IVU9 208 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 IQCKQ8N0W5 287 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 BEST3Q8N1M1 668 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 RIBC1Q8N443 379 aaPredicted RBP10.34□□□□□ -0.75
DDB1-222ENST00000543627 SLC5A8Q8N695 610 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 UCN3Q969E3 161 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 L3HYPDHQ96EM0 354 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 APOPT1Q96IL0 206 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 DGAT2Q96PD7 388 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 OR8D2Q9GZM6 311 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 WDR41Q9HAD4 459 aa10.34□□□□□ -0.75
DDB1-222ENST00000543627 MMP25Q9NPA2 562 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms