RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR35, Length 204 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR35	snR35	SNF5	P18480	905 aa		4.11	□□□□□ -1.75
snR35	snR35	SRO9	P25567	434 aa	Known RBP	4.11	□□□□□ -1.75
snR35	snR35	PRO1	P32264	428 aa		4.11	□□□□□ -1.75
snR35	snR35	CCZ1	P38273	704 aa		4.11	□□□□□ -1.75
snR35	snR35	PIK1	P39104	1066 aa		4.11	□□□□□ -1.75
snR35	snR35	MXR1	P40029	184 aa		4.11	□□□□□ -1.75
snR35	snR35	MAL11	P53048	616 aa		4.11	□□□□□ -1.75
snR35	snR35	GAS5	Q08193	484 aa		4.11	□□□□□ -1.75
snR35	snR35	YOR059C	Q08448	450 aa	Known RBP	4.11	□□□□□ -1.75
snR35	snR35	TOP3	P13099	656 aa		4.1	□□□□□ -1.75
snR35	snR35	SRM1	P21827	482 aa		4.1	□□□□□ -1.75
snR35	snR35	GSY1	P23337	708 aa		4.1	□□□□□ -1.75
snR35	snR35	TSR4	P25040	408 aa		4.1	□□□□□ -1.75
snR35	snR35	SFP1	P32432	683 aa		4.1	□□□□□ -1.75
snR35	snR35	PEX6	P33760	1030 aa		4.1	□□□□□ -1.75
snR35	snR35	YKR078W	P36158	585 aa	Known RBP	4.1	□□□□□ -1.75
snR35	snR35	YFL066C	P43538	392 aa		4.1	□□□□□ -1.75
snR35	snR35	BUL2	Q03758	920 aa	Known RBP	4.1	□□□□□ -1.75
snR35	snR35	MTC5	Q03897	1148 aa		4.1	□□□□□ -1.75
snR35	snR35	MDM12	Q92328	271 aa		4.1	□□□□□ -1.75
snR35	snR35	GRX4	P32642	244 aa		4.09	□□□□□ -1.75
snR35	snR35	MDL2	P33311	773 aa		4.09	□□□□□ -1.75
snR35	snR35	UGA2	P38067	497 aa		4.09	□□□□□ -1.75
snR35	snR35	YRO2	P38079	344 aa		4.09	□□□□□ -1.75
snR35	snR35	YBR284W	P38150	797 aa		4.09	□□□□□ -1.75
snR35	snR35	YHL012W	P38709	493 aa		4.09	□□□□□ -1.75
snR35	snR35	UBP12	P39538	1254 aa		4.09	□□□□□ -1.75
snR35	snR35	SAH1	P39954	449 aa	Known RBP	4.09	□□□□□ -1.75
snR35	snR35	RRT14	P40470	206 aa		4.09	□□□□□ -1.75
snR35	snR35	MMM1	P41800	426 aa		4.09	□□□□□ -1.75
snR35	snR35	ALG2	P43636	503 aa		4.09	□□□□□ -1.75
snR35	snR35	CCM1	P48237	864 aa	Predicted RBP	4.09	□□□□□ -1.75
snR35	snR35	DNM1	P54861	757 aa		4.09	□□□□□ -1.75
snR35	snR35	HRQ1	Q05549	1077 aa		4.09	□□□□□ -1.75
snR35	snR35	TDA6	Q06466	467 aa		4.09	□□□□□ -1.75
snR35	snR35	ATG13	Q06628	738 aa		4.09	□□□□□ -1.75
snR35	snR35	SSB1	P11484	613 aa	Known RBP	4.08	□□□□□ -1.76
snR35	snR35	SAM35	P14693	329 aa		4.08	□□□□□ -1.76
snR35	snR35	RPL8A	P17076	256 aa	Known RBP	4.08	□□□□□ -1.76
snR35	snR35	AFR1	P33304	620 aa		4.08	□□□□□ -1.76
snR35	snR35	YKL151C	P36059	337 aa		4.08	□□□□□ -1.76
snR35	snR35	YBR238C	P38330	731 aa	Known RBP	4.08	□□□□□ -1.76
snR35	snR35	CRP1	P38845	465 aa	Known RBP	4.08	□□□□□ -1.76
snR35	snR35	NMD3	P38861	518 aa	Known RBP	4.08	□□□□□ -1.76
snR35	snR35	SSB2	P40150	613 aa	Known RBP	4.08	□□□□□ -1.76
snR35	snR35	CIT3	P43635	486 aa		4.08	□□□□□ -1.76
snR35	snR35	GYP7	P48365	746 aa		4.08	□□□□□ -1.76
snR35	snR35	NBA1	Q08229	501 aa	Known RBP	4.08	□□□□□ -1.76
snR35	snR35	THI72	Q08579	599 aa		4.08	□□□□□ -1.76
snR35	snR35	YVC1	Q12324	675 aa		4.08	□□□□□ -1.76
snR35	snR35	YPR071W	Q12346	211 aa		4.08	□□□□□ -1.76
snR35	snR35	ADR1	P07248	1323 aa		4.07	□□□□□ -1.76
snR35	snR35	BI4	P03879	638 aa		4.07	□□□□□ -1.76
snR35	snR35	RAD53	P22216	821 aa		4.07	□□□□□ -1.76
snR35	snR35	RPC82	P32349	654 aa		4.07	□□□□□ -1.76
snR35	snR35	REC104	P33323	182 aa		4.07	□□□□□ -1.76
snR35	snR35	TOK1	P40310	691 aa		4.07	□□□□□ -1.76
snR35	snR35	NSG2	P53898	299 aa		4.07	□□□□□ -1.76
snR35	snR35	TFB2	Q02939	513 aa		4.07	□□□□□ -1.76
snR35	snR35	EAR1	Q03212	550 aa		4.07	□□□□□ -1.76
snR35	snR35	MDM38	Q08179	573 aa		4.07	□□□□□ -1.76
snR35	snR35	YDR215C	Q12240	137 aa		4.07	□□□□□ -1.76
snR35	snR35	FUN30	P31380	1131 aa		4.06	□□□□□ -1.76
snR35	snR35	YEL1	P34225	687 aa		4.06	□□□□□ -1.76
snR35	snR35	SAF1	P38352	637 aa		4.06	□□□□□ -1.76
snR35	snR35	TSL1	P38427	1098 aa	Known RBP	4.06	□□□□□ -1.76
snR35	snR35	AKR1	P39010	764 aa		4.06	□□□□□ -1.76
snR35	snR35	YER158C	P40095	573 aa		4.06	□□□□□ -1.76
snR35	snR35	YFL054C	P43549	646 aa		4.06	□□□□□ -1.76
snR35	snR35	PRY1	P47032	299 aa		4.06	□□□□□ -1.76
snR35	snR35	ZDS1	P50111	915 aa	Known RBP	4.06	□□□□□ -1.76
snR35	snR35	DAM1	P53267	343 aa		4.06	□□□□□ -1.76
snR35	snR35	YNR029C	P53729	429 aa	Known RBP	4.06	□□□□□ -1.76
snR35	snR35	YNL193W	P53870	558 aa		4.06	□□□□□ -1.76
snR35	snR35	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
snR35	snR35	RSC58	Q07979	502 aa		4.06	□□□□□ -1.76
snR35	snR35	PHM7	Q12252	991 aa		4.06	□□□□□ -1.76
snR35	snR35	MSB1	P21339	1137 aa	Known RBP	4.05	□□□□□ -1.76
snR35	snR35	MEF1	P25039	761 aa		4.05	□□□□□ -1.76
snR35	snR35	NPP1	P25353	742 aa		4.05	□□□□□ -1.76
snR35	snR35	CDC48	P25694	835 aa	Known RBP	4.05	□□□□□ -1.76
snR35	snR35	PGM1	P33401	570 aa	Known RBP	4.05	□□□□□ -1.76
snR35	snR35	SPC29	P33419	253 aa		4.05	□□□□□ -1.76
snR35	snR35	WHI3	P34761	661 aa	Known RBP	4.05	□□□□□ -1.76
snR35	snR35	TOM20	P35180	183 aa		4.05	□□□□□ -1.76
snR35	snR35	MDJ1	P35191	511 aa		4.05	□□□□□ -1.76
snR35	snR35	EMC3	P36039	253 aa		4.05	□□□□□ -1.76
snR35	snR35	TAT1	P38085	619 aa		4.05	□□□□□ -1.76
snR35	snR35	GIC1	P38785	314 aa		4.05	□□□□□ -1.76
snR35	snR35	DSS1	P39112	969 aa		4.05	□□□□□ -1.76
snR35	snR35	PMT3	P47190	753 aa		4.05	□□□□□ -1.76
snR35	snR35	YKE2	P52553	114 aa		4.05	□□□□□ -1.76
snR35	snR35	MTC3	P53077	123 aa		4.05	□□□□□ -1.76
snR35	snR35	YGR283C	P53336	341 aa	Predicted RBP	4.05	□□□□□ -1.76
snR35	snR35	RCM1	P53972	490 aa		4.05	□□□□□ -1.76
snR35	snR35	YPL062W	Q02781	134 aa		4.05	□□□□□ -1.76
snR35	snR35	ATP25	Q03153	612 aa		4.05	□□□□□ -1.76
snR35	snR35	SRT1	Q03175	343 aa		4.05	□□□□□ -1.76
snR35	snR35	YMR187C	Q03236	431 aa		4.05	□□□□□ -1.76
snR35	snR35	RCL1	Q08096	367 aa	Predicted RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 158.5 ms