RNA–Protein interactions for RNA: YPR111W

DBF20, Transcript of Ser/Thr kinase involved in late nuclear division, yeast

Gene DBF20, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF20	YPR111W	BDF2	Q07442	638 aa		4.01	□□□□□ -1.77
DBF20	YPR111W	YLL058W	Q12198	575 aa		4.01	□□□□□ -1.77
DBF20	YPR111W	SRP40	P32583	406 aa	Predicted RBP	4	□□□□□ -1.77
DBF20	YPR111W	YBR184W	P38299	523 aa		4	□□□□□ -1.77
DBF20	YPR111W	MBP1	P39678	833 aa		4	□□□□□ -1.77
DBF20	YPR111W	RSM24	Q03976	319 aa		4	□□□□□ -1.77
DBF20	YPR111W	SVS1	Q12254	260 aa		4	□□□□□ -1.77
DBF20	YPR111W	DFG16	Q99234	619 aa		4	□□□□□ -1.77
DBF20	YPR111W	KIN2	P13186	1147 aa	Known RBP	4	□□□□□ -1.77
DBF20	YPR111W	YKL091C	P33324	310 aa	Known RBP	4	□□□□□ -1.77
DBF20	YPR111W	BUD6	P41697	788 aa		4	□□□□□ -1.77
DBF20	YPR111W	HUL5	P53119	910 aa		4	□□□□□ -1.77
DBF20	YPR111W	FPR4	Q06205	392 aa	Predicted RBP	4	□□□□□ -1.77
DBF20	YPR111W	OSH2	Q12451	1283 aa		4	□□□□□ -1.77
DBF20	YPR111W	BI4	P03879	638 aa		3.99	□□□□□ -1.77
DBF20	YPR111W	RAD4	P14736	754 aa		3.99	□□□□□ -1.77
DBF20	YPR111W	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
DBF20	YPR111W	POL12	P38121	705 aa	Predicted RBP	3.99	□□□□□ -1.77
DBF20	YPR111W	YFL054C	P43549	646 aa		3.99	□□□□□ -1.77
DBF20	YPR111W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
DBF20	YPR111W	ERP6	P53198	216 aa		3.99	□□□□□ -1.77
DBF20	YPR111W	UTP8	P53276	713 aa	Known RBP	3.99	□□□□□ -1.77
DBF20	YPR111W	RPN4	Q03465	531 aa		3.99	□□□□□ -1.77
DBF20	YPR111W	FMP25	Q08023	583 aa		3.99	□□□□□ -1.77
DBF20	YPR111W	CDC53	Q12018	815 aa	Known RBP	3.99	□□□□□ -1.77
DBF20	YPR111W	ADE8	P04161	214 aa		3.98	□□□□□ -1.77
DBF20	YPR111W	ACE2	P21192	770 aa		3.98	□□□□□ -1.77
DBF20	YPR111W	CDC11	P32458	415 aa		3.98	□□□□□ -1.77
DBF20	YPR111W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
DBF20	YPR111W	YHR020W	P38708	688 aa	Known RBP	3.98	□□□□□ -1.77
DBF20	YPR111W	SAH1	P39954	449 aa	Known RBP	3.98	□□□□□ -1.77
DBF20	YPR111W	RNH70	P53331	553 aa		3.98	□□□□□ -1.77
DBF20	YPR111W	PPM2	Q08282	695 aa		3.98	□□□□□ -1.77
DBF20	YPR111W	YOR352W	Q08816	343 aa		3.98	□□□□□ -1.77
DBF20	YPR111W	RPL8B	P29453	256 aa	Known RBP	3.97	□□□□□ -1.77
DBF20	YPR111W	AAR2	P32357	355 aa	Predicted RBP	3.97	□□□□□ -1.77
DBF20	YPR111W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
DBF20	YPR111W	SNO2	P53823	222 aa		3.97	□□□□□ -1.77
DBF20	YPR111W	DUS3	Q06053	668 aa	Known RBP	3.97	□□□□□ -1.77
DBF20	YPR111W	EAF1	Q06337	982 aa		3.97	□□□□□ -1.77
DBF20	YPR111W	YDR306C	Q06640	478 aa		3.97	□□□□□ -1.77
DBF20	YPR111W	HSP60	P19882	572 aa	Known RBP	3.97	□□□□□ -1.77
DBF20	YPR111W	APL1	P27351	700 aa		3.97	□□□□□ -1.77
DBF20	YPR111W	PPH3	P32345	308 aa		3.97	□□□□□ -1.77
DBF20	YPR111W	TIM54	P47045	478 aa		3.97	□□□□□ -1.77
DBF20	YPR111W	MDM38	Q08179	573 aa		3.97	□□□□□ -1.77
DBF20	YPR111W	OSW2	Q12202	724 aa		3.97	□□□□□ -1.77
DBF20	YPR111W	YOR131C	Q12486	218 aa		3.97	□□□□□ -1.77
DBF20	YPR111W	GLT1	Q12680	2145 aa	Known RBP	3.96	□□□□□ -1.78
DBF20	YPR111W	CDC12	P32468	407 aa	Known RBP	3.96	□□□□□ -1.78
DBF20	YPR111W	LRG1	P35688	1017 aa		3.96	□□□□□ -1.78
DBF20	YPR111W	YKL151C	P36059	337 aa		3.96	□□□□□ -1.78
DBF20	YPR111W	YKR078W	P36158	585 aa	Known RBP	3.96	□□□□□ -1.78
DBF20	YPR111W	GGA2	P38817	585 aa	Known RBP	3.96	□□□□□ -1.78
DBF20	YPR111W	SIT1	P39980	628 aa		3.96	□□□□□ -1.78
DBF20	YPR111W	NIT1	P40447	199 aa		3.96	□□□□□ -1.78
DBF20	YPR111W	MTC3	P53077	123 aa		3.96	□□□□□ -1.78
DBF20	YPR111W	DOS2	P54858	310 aa		3.96	□□□□□ -1.78
DBF20	YPR111W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
DBF20	YPR111W	SIZ1	Q04195	904 aa		3.96	□□□□□ -1.78
DBF20	YPR111W	HRQ1	Q05549	1077 aa		3.96	□□□□□ -1.78
DBF20	YPR111W	ARE1	P25628	610 aa		3.95	□□□□□ -1.78
DBF20	YPR111W	FUN30	P31380	1131 aa		3.95	□□□□□ -1.78
DBF20	YPR111W	RPC82	P32349	654 aa		3.95	□□□□□ -1.78
DBF20	YPR111W	SPC42	P36094	363 aa		3.95	□□□□□ -1.78
DBF20	YPR111W	ETP1	P38748	585 aa	Known RBP	3.95	□□□□□ -1.78
DBF20	YPR111W	ALR2	P43553	858 aa		3.95	□□□□□ -1.78
DBF20	YPR111W	PFD1	P46988	109 aa		3.95	□□□□□ -1.78
DBF20	YPR111W	HFM1	P51979	1187 aa		3.95	□□□□□ -1.78
DBF20	YPR111W	YGR125W	P53273	1036 aa		3.95	□□□□□ -1.78
DBF20	YPR111W	MRPL22	P53881	309 aa		3.95	□□□□□ -1.78
DBF20	YPR111W	CIT1	P00890	479 aa		3.94	□□□□□ -1.78
DBF20	YPR111W	ABZ1	P37254	787 aa	Predicted RBP	3.94	□□□□□ -1.78
DBF20	YPR111W	NMD2	P38798	1089 aa	Known RBP	3.94	□□□□□ -1.78
DBF20	YPR111W	HUL4	P40985	892 aa		3.94	□□□□□ -1.78
DBF20	YPR111W	GYP7	P48365	746 aa		3.94	□□□□□ -1.78
DBF20	YPR111W	PRP43	P53131	767 aa	Known RBP	3.94	□□□□□ -1.78
DBF20	YPR111W	PBP1	P53297	722 aa	Known RBP	3.94	□□□□□ -1.78
DBF20	YPR111W	SRT1	Q03175	343 aa		3.94	□□□□□ -1.78
DBF20	YPR111W	SGD1	Q06132	899 aa		3.94	□□□□□ -1.78
DBF20	YPR111W	FLC1	Q08967	793 aa		3.94	□□□□□ -1.78
DBF20	YPR111W	CYC1	P00044	109 aa	Predicted RBP	3.94	□□□□□ -1.78
DBF20	YPR111W	SEG2	P34250	1132 aa		3.94	□□□□□ -1.78
DBF20	YPR111W	RSP5	P39940	809 aa	Known RBP	3.94	□□□□□ -1.78
DBF20	YPR111W	CHZ1	P40019	153 aa	Predicted RBP	3.94	□□□□□ -1.78
DBF20	YPR111W	ALG12	P53730	551 aa		3.94	□□□□□ -1.78
DBF20	YPR111W	MSC2	Q03455	724 aa		3.94	□□□□□ -1.78
DBF20	YPR111W	RPP2A	P05319	106 aa	Known RBP	3.93	□□□□□ -1.78
DBF20	YPR111W	CMP2	P14747	604 aa		3.93	□□□□□ -1.78
DBF20	YPR111W	ELM1	P32801	640 aa		3.93	□□□□□ -1.78
DBF20	YPR111W	TIM23	P32897	222 aa		3.93	□□□□□ -1.78
DBF20	YPR111W	YRO2	P38079	344 aa		3.93	□□□□□ -1.78
DBF20	YPR111W	BRN1	P38170	754 aa		3.93	□□□□□ -1.78
DBF20	YPR111W	LAM1	P38851	1228 aa		3.93	□□□□□ -1.78
DBF20	YPR111W	YAP1801	P38856	637 aa		3.93	□□□□□ -1.78
DBF20	YPR111W	CCC2	P38995	1004 aa		3.93	□□□□□ -1.78
DBF20	YPR111W	OSW7	P43611	510 aa		3.93	□□□□□ -1.78
DBF20	YPR111W	AVT1	P47082	602 aa		3.93	□□□□□ -1.78
DBF20	YPR111W	CCM1	P48237	864 aa	Predicted RBP	3.93	□□□□□ -1.78
DBF20	YPR111W	LCD1	Q04377	747 aa		3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 110.8 ms