RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeastyeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFI1YPL254W GDE1Q02979 1223 aa6.78□□□□□ -1.32
HFI1YPL254W TMA46Q12000 345 aaKnown RBP6.78□□□□□ -1.32
HFI1YPL254W MKK2P32491 506 aa6.77□□□□□ -1.33
HFI1YPL254W OPY1P38271 328 aa6.77□□□□□ -1.33
HFI1YPL254W HSE1P38753 452 aa6.77□□□□□ -1.33
HFI1YPL254W RAT1Q02792 1006 aaKnown RBP6.77□□□□□ -1.33
HFI1YPL254W NFS1P25374 497 aa6.76□□□□□ -1.33
HFI1YPL254W AFG2P32794 780 aa6.76□□□□□ -1.33
HFI1YPL254W SMY2P32909 740 aaKnown RBP6.76□□□□□ -1.33
HFI1YPL254W NNK1P36003 928 aa6.76□□□□□ -1.33
HFI1YPL254W SAF1P38352 637 aa6.76□□□□□ -1.33
HFI1YPL254W RTR1P40084 226 aaPredicted RBP6.76□□□□□ -1.33
HFI1YPL254W FAA4P47912 694 aaKnown RBP6.76□□□□□ -1.33
HFI1YPL254W URN1Q06525 465 aaKnown RBP6.76□□□□□ -1.33
HFI1YPL254W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
HFI1YPL254W BNI1P41832 1953 aa6.76□□□□□ -1.33
HFI1YPL254W KRE5P22023 1365 aa6.76□□□□□ -1.33
HFI1YPL254W RPS4AP0CX35 261 aaKnown RBP6.75□□□□□ -1.33
HFI1YPL254W RPS4BP0CX36 261 aaKnown RBP6.75□□□□□ -1.33
HFI1YPL254W RET1P22276 1149 aaKnown RBP6.75□□□□□ -1.33
HFI1YPL254W PGM1P33401 570 aaKnown RBP6.75□□□□□ -1.33
HFI1YPL254W RER2P35196 286 aa6.75□□□□□ -1.33
HFI1YPL254W LSB3P43603 459 aaKnown RBP6.75□□□□□ -1.33
HFI1YPL254W ENT3P47160 408 aa6.75□□□□□ -1.33
HFI1YPL254W RCM1P53972 490 aa6.75□□□□□ -1.33
HFI1YPL254W MTC5Q03897 1148 aa6.75□□□□□ -1.33
HFI1YPL254W PTC5Q12511 572 aa6.75□□□□□ -1.33
HFI1YPL254W PPH3P32345 308 aa6.74□□□□□ -1.33
HFI1YPL254W NMD3P38861 518 aaKnown RBP6.74□□□□□ -1.33
HFI1YPL254W EEB1Q02891 456 aa6.74□□□□□ -1.33
HFI1YPL254W RSA3Q05942 220 aaKnown RBP6.74□□□□□ -1.33
HFI1YPL254W YLR257WQ06146 321 aaKnown RBP6.74□□□□□ -1.33
HFI1YPL254W SYP1P25623 870 aaKnown RBP6.73□□□□□ -1.33
HFI1YPL254W ALG3P38179 458 aa6.73□□□□□ -1.33
HFI1YPL254W YGR053CP53234 283 aa6.73□□□□□ -1.33
HFI1YPL254W IOC4Q04213 475 aa6.73□□□□□ -1.33
HFI1YPL254W CHS2P14180 963 aa6.73□□□□□ -1.33
HFI1YPL254W DAL5P15365 543 aa6.73□□□□□ -1.33
HFI1YPL254W QNS1P38795 714 aaKnown RBP6.73□□□□□ -1.33
HFI1YPL254W VPS53P47061 822 aa6.73□□□□□ -1.33
HFI1YPL254W ALT1P52893 592 aa6.73□□□□□ -1.33
HFI1YPL254W EAR1Q03212 550 aa6.73□□□□□ -1.33
HFI1YPL254W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
HFI1YPL254W THI22Q06490 572 aa6.73□□□□□ -1.33
HFI1YPL254W HIM1Q06674 414 aa6.73□□□□□ -1.33
HFI1YPL254W TRP2P00899 507 aaKnown RBP6.72□□□□□ -1.33
HFI1YPL254W WHI3P34761 661 aaKnown RBP6.72□□□□□ -1.33
HFI1YPL254W MMM1P41800 426 aa6.72□□□□□ -1.33
HFI1YPL254W YRB30P53107 440 aaPredicted RBP6.72□□□□□ -1.33
HFI1YPL254W TYW3P53177 273 aa6.72□□□□□ -1.33
HFI1YPL254W YLR122CQ12312 125 aa6.72□□□□□ -1.33
HFI1YPL254W KAE1P36132 386 aa6.71□□□□□ -1.34
HFI1YPL254W PAP2P53632 584 aaKnown RBP6.71□□□□□ -1.34
HFI1YPL254W RIA1P53893 1110 aa6.71□□□□□ -1.34
HFI1YPL254W TPP1Q03796 238 aa6.71□□□□□ -1.34
HFI1YPL254W PRI2P20457 528 aa6.7□□□□□ -1.34
HFI1YPL254W LYP1P32487 611 aa6.7□□□□□ -1.34
HFI1YPL254W YIL092WP40497 633 aa6.7□□□□□ -1.34
HFI1YPL254W CNN1P43618 361 aa6.7□□□□□ -1.34
HFI1YPL254W TIF35Q04067 274 aaKnown RBP6.7□□□□□ -1.34
HFI1YPL254W PSK1P31374 1356 aa6.69□□□□□ -1.34
HFI1YPL254W AUS1Q08409 1394 aa6.69□□□□□ -1.34
HFI1YPL254W HAP1P0CE41 1502 aa6.69□□□□□ -1.34
HFI1YPL254W DBP5P20449 482 aaKnown RBP6.69□□□□□ -1.34
HFI1YPL254W PRD1P25375 712 aa6.69□□□□□ -1.34
HFI1YPL254W CIT3P43635 486 aa6.69□□□□□ -1.34
HFI1YPL254W YGR130CP53278 816 aa6.69□□□□□ -1.34
HFI1YPL254W HEF3P53978 1044 aaKnown RBP6.69□□□□□ -1.34
HFI1YPL254W AOS1Q06624 347 aa6.69□□□□□ -1.34
HFI1YPL254W RTT109Q07794 436 aa6.69□□□□□ -1.34
HFI1YPL254W PUS7Q08647 676 aaKnown RBP6.69□□□□□ -1.34
HFI1YPL254W FAL1Q12099 399 aaKnown RBP6.69□□□□□ -1.34
HFI1YPL254W CLC1P17891 233 aa6.68□□□□□ -1.34
HFI1YPL254W BAS1P22035 811 aa6.68□□□□□ -1.34
HFI1YPL254W KIP1P28742 1111 aa6.68□□□□□ -1.34
HFI1YPL254W MLS1P30952 554 aa6.68□□□□□ -1.34
HFI1YPL254W MOT2P34909 587 aaKnown RBP6.68□□□□□ -1.34
HFI1YPL254W MCM7P38132 845 aa6.68□□□□□ -1.34
HFI1YPL254W EAF7P53911 425 aaKnown RBP6.68□□□□□ -1.34
HFI1YPL254W HRK1Q08732 759 aaKnown RBP6.68□□□□□ -1.34
HFI1YPL254W MSB1P21339 1137 aaKnown RBP6.67□□□□□ -1.34
HFI1YPL254W GPB2P39717 880 aa6.67□□□□□ -1.34
HFI1YPL254W YJL045WP47052 634 aa6.67□□□□□ -1.34
HFI1YPL254W SPO20Q04359 397 aa6.67□□□□□ -1.34
HFI1YPL254W YLR225CQ05948 407 aaKnown RBP6.67□□□□□ -1.34
HFI1YPL254W OPI10Q08202 246 aa6.67□□□□□ -1.34
HFI1YPL254W WRS1Q12109 432 aaKnown RBP6.67□□□□□ -1.34
HFI1YPL254W INO1P11986 533 aa6.66□□□□□ -1.34
HFI1YPL254W RGD1P38339 666 aa6.66□□□□□ -1.34
HFI1YPL254W DNF3Q12674 1656 aa6.66□□□□□ -1.34
HFI1YPL254W PUF4P25339 888 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
HFI1YPL254W YIR014WP40570 242 aa6.66□□□□□ -1.34
HFI1YPL254W TAP42Q04372 366 aa6.66□□□□□ -1.34
HFI1YPL254W ESC2Q06340 456 aa6.66□□□□□ -1.34
HFI1YPL254W YOR059CQ08448 450 aaKnown RBP6.66□□□□□ -1.34
HFI1YPL254W YVC1Q12324 675 aa6.66□□□□□ -1.34
HFI1YPL254W SPO21Q12411 609 aa6.66□□□□□ -1.34
HFI1YPL254W MPH1P40562 993 aa6.65□□□□□ -1.35
HFI1YPL254W HNT2P49775 206 aa6.65□□□□□ -1.35
HFI1YPL254W YPL260WQ08977 551 aa6.65□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms