RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	PDS5	Q04264	1277 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	YOR289W	Q12012	251 aa	Predicted RBP	4.77	□□□□□ -1.65
TRM44	YPL030W	ACF2	Q12168	779 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	SCM3	Q12334	223 aa		4.77	□□□□□ -1.65
TRM44	YPL030W	RRP36	Q12481	300 aa	Predicted RBP	4.77	□□□□□ -1.65
TRM44	YPL030W	DNA2	P38859	1522 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	HIS3	P06633	220 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	OCA4	P25366	362 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	YEL043W	P32618	956 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	PXA2	P34230	853 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	HEL1	P36113	551 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	SET3	P36124	751 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	ECM4	P36156	370 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	TRZ1	P36159	838 aa	Predicted RBP	4.76	□□□□□ -1.65
TRM44	YPL030W	RIC1	P40395	1056 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	RSM25	P40496	264 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	YIL092W	P40497	633 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	MNT3	P40549	630 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	DAS1	P47005	663 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	CAF130	P53280	1122 aa	Predicted RBP	4.76	□□□□□ -1.65
TRM44	YPL030W	MGR3	Q04472	501 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	FAR8	Q05040	523 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	ATG17	Q06410	417 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	AOS1	Q06624	347 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	BDF2	Q07442	638 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	MET7	Q08645	548 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	NUP157	P40064	1391 aa	Known RBP	4.76	□□□□□ -1.65
TRM44	YPL030W	AUS1	Q08409	1394 aa		4.76	□□□□□ -1.65
TRM44	YPL030W	STE6	P12866	1290 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	SSE1	P32589	693 aa	Known RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	VPS51	P36116	164 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	REI1	P38344	393 aa	Predicted RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	MBP1	P39678	833 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	DOT6	P40059	670 aa	Known RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	XKS1	P42826	600 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	VTC2	P43585	828 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	CSN12	P47130	423 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	ARH1	P48360	493 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	YGR266W	P53326	701 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	PTA1	Q01329	785 aa	Predicted RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	UBP2	Q01476	1272 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	CUS1	Q02554	436 aa	Predicted RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	RVB1	Q03940	463 aa	Known RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	NSE3	Q05541	303 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	DPL1	Q05567	589 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	OMS1	Q06668	471 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	RVB2	Q12464	471 aa	Known RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	YPR089W	O13585	888 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	PGK1	P00560	416 aa	Known RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	TUF1	P02992	437 aa	Known RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	ADE8	P04161	214 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	RSR1	P13856	272 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	TYR1	P20049	452 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	HCA4	P20448	770 aa	Known RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	MEI4	P29467	408 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	NTG1	P31378	399 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	TPS2	P31688	896 aa	Known RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	NPL4	P33755	580 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	ATP3	P38077	311 aa	Known RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	RFC5	P38251	354 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	FZO1	P38297	855 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	PRE3	P38624	215 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	STP2	P38704	541 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	SPT8	P38915	602 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	HXT6	P39003	570 aa	Known RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	HXT7	P39004	570 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	STM1	P39015	273 aa	Known RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	YJL070C	P40361	888 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	SAP185	P40856	1058 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	STB1	P42845	420 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	JJJ2	P46997	583 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	NNF1	P47149	201 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	ATP22	P50273	684 aa	Predicted RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	YGL242C	P53066	181 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	MDR1	P53258	950 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	GIM3	P53900	129 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	ESBP6	P53918	673 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	BET4	Q00618	327 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	RRN5	Q02983	363 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	VPS16	Q03308	798 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	SRC1	Q03707	834 aa		4.75	□□□□□ -1.65
TRM44	YPL030W	HTZ1	Q12692	134 aa	Known RBP	4.75	□□□□□ -1.65
TRM44	YPL030W	MYO2	P19524	1574 aa	Known RBP	4.74	□□□□□ -1.65
TRM44	YPL030W	SSK2	P53599	1579 aa		4.74	□□□□□ -1.65
TRM44	YPL030W	YMR085W	P0CF18	432 aa		4.74	□□□□□ -1.65
TRM44	YPL030W	GCD2	P12754	651 aa	Predicted RBP	4.74	□□□□□ -1.65
TRM44	YPL030W	TRM1	P15565	570 aa	Known RBP	4.74	□□□□□ -1.65
TRM44	YPL030W	DIT1	P21623	536 aa		4.74	□□□□□ -1.65
TRM44	YPL030W	CHL1	P22516	861 aa	Predicted RBP	4.74	□□□□□ -1.65
TRM44	YPL030W	PGS1	P25578	521 aa		4.74	□□□□□ -1.65
TRM44	YPL030W	AAD3	P25612	363 aa		4.74	□□□□□ -1.65
TRM44	YPL030W	HSP30	P25619	332 aa		4.74	□□□□□ -1.65
TRM44	YPL030W	RPC19	P28000	142 aa	Known RBP	4.74	□□□□□ -1.65
TRM44	YPL030W	VMA8	P32610	256 aa	Known RBP	4.74	□□□□□ -1.65
TRM44	YPL030W	RRN6	P32786	894 aa		4.74	□□□□□ -1.65
TRM44	YPL030W	RAD5	P32849	1169 aa	Predicted RBP	4.74	□□□□□ -1.65
TRM44	YPL030W	XRS2	P33301	854 aa		4.74	□□□□□ -1.65
TRM44	YPL030W	YKL222C	P35995	705 aa		4.74	□□□□□ -1.65
TRM44	YPL030W	AMN1	P38285	549 aa	Predicted RBP	4.74	□□□□□ -1.65
TRM44	YPL030W	FCY21	P40039	528 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms