RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	ALO1	P54783	526 aa	Known RBP	5.54	□□□□□ -1.52
YTM1	YOR272W	RCL1	Q08096	367 aa	Predicted RBP	5.54	□□□□□ -1.52
YTM1	YOR272W	TAF2	P23255	1407 aa		5.53	□□□□□ -1.52
YTM1	YOR272W	PRP9	P19736	530 aa	Known RBP	5.53	□□□□□ -1.52
YTM1	YOR272W	DBP2	P24783	546 aa	Known RBP	5.53	□□□□□ -1.52
YTM1	YOR272W	SRP40	P32583	406 aa	Predicted RBP	5.53	□□□□□ -1.52
YTM1	YOR272W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.53	□□□□□ -1.52	not detected
YTM1	YOR272W	GTS1	P40956	396 aa		5.53	□□□□□ -1.52
YTM1	YOR272W	NSE3	Q05541	303 aa		5.53	□□□□□ -1.52
YTM1	YOR272W	OSH2	Q12451	1283 aa		5.53	□□□□□ -1.52
YTM1	YOR272W	YPK9	Q12697	1472 aa		5.52	□□□□□ -1.53
YTM1	YOR272W	OMA1	P36163	345 aa		5.52	□□□□□ -1.53
YTM1	YOR272W	UGA2	P38067	497 aa		5.52	□□□□□ -1.53
YTM1	YOR272W	YTA7	P40340	1379 aa		5.51	□□□□□ -1.53
YTM1	YOR272W	AIM26	P32858	118 aa		5.51	□□□□□ -1.53
YTM1	YOR272W	SLA2	P33338	968 aa		5.51	□□□□□ -1.53
YTM1	YOR272W	TIM54	P47045	478 aa		5.51	□□□□□ -1.53
YTM1	YOR272W	FOL2	P51601	243 aa	Known RBP	5.51	□□□□□ -1.53
YTM1	YOR272W	TPO2	P53283	614 aa		5.51	□□□□□ -1.53
YTM1	YOR272W	ORC3	P54790	616 aa		5.51	□□□□□ -1.53
YTM1	YOR272W	SDH1	Q00711	640 aa		5.51	□□□□□ -1.53
YTM1	YOR272W	BRE4	Q07660	1125 aa		5.51	□□□□□ -1.53
YTM1	YOR272W	FMP25	Q08023	583 aa		5.51	□□□□□ -1.53
YTM1	YOR272W	CDC53	Q12018	815 aa	Known RBP	5.51	□□□□□ -1.53
YTM1	YOR272W	YOR131C	Q12486	218 aa		5.51	□□□□□ -1.53
YTM1	YOR272W	SPS1	P08458	490 aa		5.5	□□□□□ -1.53
YTM1	YOR272W	RPL8B	P29453	256 aa	Known RBP	5.5	□□□□□ -1.53
YTM1	YOR272W	LIP5	P32875	414 aa		5.5	□□□□□ -1.53
YTM1	YOR272W	YFL054C	P43549	646 aa		5.5	□□□□□ -1.53
YTM1	YOR272W	IOC3	P43596	787 aa		5.5	□□□□□ -1.53
YTM1	YOR272W	INP52	P50942	1183 aa		5.5	□□□□□ -1.53
YTM1	YOR272W	HUL5	P53119	910 aa		5.5	□□□□□ -1.53
YTM1	YOR272W	ERP6	P53198	216 aa		5.5	□□□□□ -1.53
YTM1	YOR272W	ENV11	P53246	860 aa		5.5	□□□□□ -1.53
YTM1	YOR272W	UTP8	P53276	713 aa	Known RBP	5.5	□□□□□ -1.53
YTM1	YOR272W	SRP1	Q02821	542 aa	Known RBP	5.5	□□□□□ -1.53
YTM1	YOR272W	EAF1	Q06337	982 aa		5.5	□□□□□ -1.53
YTM1	YOR272W	ATG13	Q06628	738 aa		5.5	□□□□□ -1.53
YTM1	YOR272W	BDF2	Q07442	638 aa		5.5	□□□□□ -1.53
YTM1	YOR272W	SCC2	Q04002	1493 aa		5.5	□□□□□ -1.53
YTM1	YOR272W	UFD4	P33202	1483 aa		5.49	□□□□□ -1.53
YTM1	YOR272W	SEC26	P41810	973 aa	Known RBP	5.49	□□□□□ -1.53
YTM1	YOR272W	PFD1	P46988	109 aa		5.49	□□□□□ -1.53
YTM1	YOR272W	HSP60	P19882	572 aa	Known RBP	5.48	□□□□□ -1.53
YTM1	YOR272W	MAC1	P35192	417 aa		5.48	□□□□□ -1.53
YTM1	YOR272W	RRT14	P40470	206 aa		5.48	□□□□□ -1.53
YTM1	YOR272W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.48	□□□□□ -1.53	not detected
YTM1	YOR272W	CTH1	P47976	325 aa		5.48	□□□□□ -1.53
YTM1	YOR272W	YGR125W	P53273	1036 aa		5.48	□□□□□ -1.53
YTM1	YOR272W	DUS3	Q06053	668 aa	Known RBP	5.48	□□□□□ -1.53
YTM1	YOR272W	FPR4	Q06205	392 aa	Predicted RBP	5.48	□□□□□ -1.53
YTM1	YOR272W	YDR306C	Q06640	478 aa		5.48	□□□□□ -1.53
YTM1	YOR272W	FLC1	Q08967	793 aa		5.48	□□□□□ -1.53
YTM1	YOR272W	YLL058W	Q12198	575 aa		5.48	□□□□□ -1.53
YTM1	YOR272W	LPX1	Q12405	387 aa	Known RBP	5.48	□□□□□ -1.53
YTM1	YOR272W	BI4	P03879	638 aa		5.47	□□□□□ -1.53
YTM1	YOR272W	CDC11	P32458	415 aa		5.47	□□□□□ -1.53
YTM1	YOR272W	YKL091C	P33324	310 aa	Known RBP	5.47	□□□□□ -1.53
YTM1	YOR272W	ALR2	P43553	858 aa		5.47	□□□□□ -1.53
YTM1	YOR272W	SVS1	Q12254	260 aa		5.47	□□□□□ -1.53
YTM1	YOR272W	ESC1	Q03661	1658 aa	Known RBP	5.47	□□□□□ -1.53
YTM1	YOR272W	RPO31	P04051	1460 aa		5.47	□□□□□ -1.53
YTM1	YOR272W	TY2B-LR1	P0C2J3	1770 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	TY2B-F	P0CX63	1770 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	TY2B-GR2	P0CX64	1770 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	TY2B-C	P25384	1770 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	TY2B-DR2	Q03494	1770 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	TY1B-DR1	Q03855	1755 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	TY2B-DR3	Q07791	1770 aa	Known RBP	5.46	□□□□□ -1.54
YTM1	YOR272W	TY2B-OR1	Q12113	1770 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	TY2B-DR1	Q12472	1770 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	TY2B-OR2	Q12501	1770 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	ACE2	P21192	770 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	ARE1	P25628	610 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	AAR2	P32357	355 aa	Predicted RBP	5.46	□□□□□ -1.54
YTM1	YOR272W	HSP78	P33416	811 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	RFC5	P38251	354 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	GGA2	P38817	585 aa	Known RBP	5.46	□□□□□ -1.54
YTM1	YOR272W	SAH1	P39954	449 aa	Known RBP	5.46	□□□□□ -1.54
YTM1	YOR272W	RPN4	Q03465	531 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	CDC25	P04821	1589 aa		5.46	□□□□□ -1.54
YTM1	YOR272W	CIT1	P00890	479 aa		5.45	□□□□□ -1.54
YTM1	YOR272W	ADE8	P04161	214 aa		5.45	□□□□□ -1.54
YTM1	YOR272W	PPH3	P32345	308 aa		5.45	□□□□□ -1.54
YTM1	YOR272W	YHR020W	P38708	688 aa	Known RBP	5.45	□□□□□ -1.54
YTM1	YOR272W	HUL4	P40985	892 aa		5.45	□□□□□ -1.54
YTM1	YOR272W	OSW7	P43611	510 aa		5.45	□□□□□ -1.54
YTM1	YOR272W	KIN2	P13186	1147 aa	Known RBP	5.44	□□□□□ -1.54
YTM1	YOR272W	CDC12	P32468	407 aa	Known RBP	5.44	□□□□□ -1.54
YTM1	YOR272W	YKL151C	P36059	337 aa		5.44	□□□□□ -1.54
YTM1	YOR272W	SIT1	P39980	628 aa		5.44	□□□□□ -1.54
YTM1	YOR272W	CHZ1	P40019	153 aa	Predicted RBP	5.44	□□□□□ -1.54
YTM1	YOR272W	MTC3	P53077	123 aa		5.44	□□□□□ -1.54
YTM1	YOR272W	ORC1	P54784	914 aa	Predicted RBP	5.44	□□□□□ -1.54
YTM1	YOR272W	RSM24	Q03976	319 aa		5.44	□□□□□ -1.54
YTM1	YOR272W	HRQ1	Q05549	1077 aa		5.44	□□□□□ -1.54
YTM1	YOR272W	TY1B-BR	Q12193	1756 aa		5.44	□□□□□ -1.54
YTM1	YOR272W	TY1B-GR3	Q12316	1755 aa		5.44	□□□□□ -1.54
YTM1	YOR272W	TY1B-OR	Q92393	1755 aa		5.44	□□□□□ -1.54
YTM1	YOR272W	HBS1	P32769	611 aa	Known RBP	5.43	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms