RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeastyeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLP1YOR250C EAR1Q03212 550 aa6.63□□□□□ -1.35
CLP1YOR250C DAL4Q04895 635 aa6.63□□□□□ -1.35
CLP1YOR250C FPR4Q06205 392 aaPredicted RBP6.63□□□□□ -1.35
CLP1YOR250C TRE1Q08919 783 aa6.63□□□□□ -1.35
CLP1YOR250C NOP58Q12499 511 aaKnown RBP6.63□□□□□ -1.35
CLP1YOR250C YRF1-4O13559 1382 aa6.63□□□□□ -1.35
CLP1YOR250C YML133CQ03099 1374 aa6.63□□□□□ -1.35
CLP1YOR250C YLL067CQ07888 1374 aa6.63□□□□□ -1.35
CLP1YOR250C YLL066CQ99208 1374 aa6.63□□□□□ -1.35
CLP1YOR250C BNI1P41832 1953 aa6.62□□□□□ -1.35
CLP1YOR250C MET5P47169 1442 aa6.62□□□□□ -1.35
CLP1YOR250C ADP1P25371 1049 aa6.62□□□□□ -1.35
CLP1YOR250C UTP5Q04177 643 aaKnown RBP6.62□□□□□ -1.35
CLP1YOR250C DFG16Q99234 619 aa6.62□□□□□ -1.35
CLP1YOR250C SIR4P11978 1358 aa6.61□□□□□ -1.35
CLP1YOR250C POL12P38121 705 aaPredicted RBP6.61□□□□□ -1.35
CLP1YOR250C PEX7P39108 375 aa6.61□□□□□ -1.35
CLP1YOR250C RSM26P47141 266 aa6.61□□□□□ -1.35
CLP1YOR250C THI22Q06490 572 aa6.61□□□□□ -1.35
CLP1YOR250C RLP24Q07915 199 aaKnown RBP6.61□□□□□ -1.35
CLP1YOR250C WHI5Q12416 295 aa6.61□□□□□ -1.35
CLP1YOR250C BCK1Q01389 1478 aa6.6□□□□□ -1.35
CLP1YOR250C PRD1P25375 712 aa6.6□□□□□ -1.35
CLP1YOR250C SQT1P35184 431 aa6.6□□□□□ -1.35
CLP1YOR250C LRG1P35688 1017 aa6.6□□□□□ -1.35
CLP1YOR250C HSE1P38753 452 aa6.6□□□□□ -1.35
CLP1YOR250C NMD2P38798 1089 aaKnown RBP6.6□□□□□ -1.35
CLP1YOR250C HEF3P53978 1044 aaKnown RBP6.6□□□□□ -1.35
CLP1YOR250C PUS7Q08647 676 aaKnown RBP6.6□□□□□ -1.35
CLP1YOR250C HSP78P33416 811 aa6.59□□□□□ -1.35
CLP1YOR250C NIT1P40447 199 aa6.59□□□□□ -1.35
CLP1YOR250C PEX13P80667 386 aa6.59□□□□□ -1.35
CLP1YOR250C YPL109CQ02981 657 aa6.59□□□□□ -1.35
CLP1YOR250C RKM2Q03942 479 aa6.59□□□□□ -1.35
CLP1YOR250C LAP2Q10740 671 aa6.59□□□□□ -1.35
CLP1YOR250C DNF3Q12674 1656 aa6.58□□□□□ -1.36
CLP1YOR250C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
CLP1YOR250C UGA4P32837 571 aa6.58□□□□□ -1.36
CLP1YOR250C RDH54P38086 958 aa6.58□□□□□ -1.36
CLP1YOR250C PEX28P38848 579 aa6.58□□□□□ -1.36
CLP1YOR250C THI12P42883 340 aa6.58□□□□□ -1.36
CLP1YOR250C THI5P43534 340 aa6.58□□□□□ -1.36
CLP1YOR250C THI11P47183 340 aa6.58□□□□□ -1.36
CLP1YOR250C PIL1P53252 339 aaKnown RBP6.58□□□□□ -1.36
CLP1YOR250C ADI1Q03677 179 aa6.58□□□□□ -1.36
CLP1YOR250C SSY1Q03770 852 aa6.58□□□□□ -1.36
CLP1YOR250C ECM16Q04217 1267 aaKnown RBP6.58□□□□□ -1.36
CLP1YOR250C COG8Q04632 607 aa6.58□□□□□ -1.36
CLP1YOR250C THI13Q07748 340 aa6.58□□□□□ -1.36
CLP1YOR250C RAD9P14737 1309 aa6.57□□□□□ -1.36
CLP1YOR250C RET1P22276 1149 aaKnown RBP6.57□□□□□ -1.36
CLP1YOR250C SEG2P34250 1132 aa6.57□□□□□ -1.36
CLP1YOR250C ATG14P38270 344 aa6.57□□□□□ -1.36
CLP1YOR250C XKS1P42826 600 aa6.57□□□□□ -1.36
CLP1YOR250C TPP1Q03796 238 aa6.57□□□□□ -1.36
CLP1YOR250C HXK1P04806 485 aaKnown RBP6.56□□□□□ -1.36
CLP1YOR250C MDG1P53885 366 aa6.56□□□□□ -1.36
CLP1YOR250C SEN54Q02825 467 aaPredicted RBP6.56□□□□□ -1.36
CLP1YOR250C LCD1Q04377 747 aa6.56□□□□□ -1.36
CLP1YOR250C RSA3Q05942 220 aaKnown RBP6.56□□□□□ -1.36
CLP1YOR250C YLR257WQ06146 321 aaKnown RBP6.56□□□□□ -1.36
CLP1YOR250C TOS4Q06266 489 aa6.56□□□□□ -1.36
CLP1YOR250C HRK1Q08732 759 aaKnown RBP6.56□□□□□ -1.36
CLP1YOR250C TOA1P32773 286 aa6.55□□□□□ -1.36
CLP1YOR250C YGL140CP53120 1219 aa6.55□□□□□ -1.36
CLP1YOR250C TAP42Q04372 366 aa6.55□□□□□ -1.36
CLP1YOR250C RTT109Q07794 436 aa6.55□□□□□ -1.36
CLP1YOR250C HIF1Q12373 385 aa6.55□□□□□ -1.36
CLP1YOR250C LPX1Q12405 387 aaKnown RBP6.55□□□□□ -1.36
CLP1YOR250C TAF13P11747 167 aa6.54□□□□□ -1.36
CLP1YOR250C SEC23P15303 768 aaKnown RBP6.54□□□□□ -1.36
CLP1YOR250C PRO1P32264 428 aa6.54□□□□□ -1.36
CLP1YOR250C SPC110P32380 944 aa6.54□□□□□ -1.36
CLP1YOR250C SLD2P34252 453 aa6.54□□□□□ -1.36
CLP1YOR250C ADD66P36040 267 aa6.54□□□□□ -1.36
CLP1YOR250C RPT1P33299 467 aaKnown RBP6.53□□□□□ -1.36
CLP1YOR250C IPL1P38991 367 aa6.53□□□□□ -1.36
CLP1YOR250C FAA3P39002 694 aa6.53□□□□□ -1.36
CLP1YOR250C UBP5P39944 805 aa6.53□□□□□ -1.36
CLP1YOR250C RRT14P40470 206 aa6.53□□□□□ -1.36
CLP1YOR250C VPS53P47061 822 aa6.53□□□□□ -1.36
CLP1YOR250C PRP43P53131 767 aaKnown RBP6.53□□□□□ -1.36
CLP1YOR250C RSC1P53236 928 aa6.53□□□□□ -1.36
CLP1YOR250C NUP145P49687 1317 aa6.53□□□□□ -1.36
CLP1YOR250C SAM35P14693 329 aa6.52□□□□□ -1.37
CLP1YOR250C RNQ1P25367 405 aa6.52□□□□□ -1.37
CLP1YOR250C MDL2P33311 773 aa6.52□□□□□ -1.37
CLP1YOR250C TYS1P36421 394 aaKnown RBP6.52□□□□□ -1.37
CLP1YOR250C PTC7P38797 343 aa6.52□□□□□ -1.37
CLP1YOR250C BDH2P39713 417 aa6.52□□□□□ -1.37
CLP1YOR250C SUB1P54000 292 aaKnown RBP6.52□□□□□ -1.37
CLP1YOR250C SRO9P25567 434 aaKnown RBP6.51□□□□□ -1.37
CLP1YOR250C TSA1P34760 196 aaKnown RBP6.51□□□□□ -1.37
CLP1YOR250C YHL012WP38709 493 aa6.51□□□□□ -1.37
CLP1YOR250C QNS1P38795 714 aaKnown RBP6.51□□□□□ -1.37
CLP1YOR250C PAP2P53632 584 aaKnown RBP6.51□□□□□ -1.37
CLP1YOR250C MCD1Q12158 566 aa6.51□□□□□ -1.37
CLP1YOR250C GIN4Q12263 1142 aa6.51□□□□□ -1.37
CLP1YOR250C RAD50P12753 1312 aa6.51□□□□□ -1.37
CLP1YOR250C HEM13P11353 328 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms