RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE4	YNR060W	MET13	P53128	600 aa		4.13	□□□□□ -1.75
FRE4	YNR060W	SPC105	P53148	917 aa		4.13	□□□□□ -1.75
FRE4	YNR060W	YNR065C	P53751	1116 aa		4.13	□□□□□ -1.75
FRE4	YNR060W	ADE12	P80210	433 aa	Known RBP	4.13	□□□□□ -1.75
FRE4	YNR060W	CDC9	P04819	755 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	SRD1	P09007	221 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	MSD1	P15179	658 aa	Known RBP	4.12	□□□□□ -1.75
FRE4	YNR060W	YEF3	P16521	1044 aa	Known RBP	4.12	□□□□□ -1.75
FRE4	YNR060W	FPS1	P23900	669 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	AFG2	P32794	780 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	DSS1	P39112	969 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	NOC2	P39744	710 aa	Known RBP	4.12	□□□□□ -1.75
FRE4	YNR060W	SIT1	P39980	628 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	CNN1	P43618	361 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	RLP24	Q07915	199 aa	Known RBP	4.12	□□□□□ -1.75
FRE4	YNR060W	RPP1A	P05318	106 aa	Predicted RBP	4.12	□□□□□ -1.75
FRE4	YNR060W	TOM70	P07213	617 aa	Known RBP	4.12	□□□□□ -1.75
FRE4	YNR060W	MPH2	P0CD99	609 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	NFU1	P32860	256 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	PET10	P36139	283 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
FRE4	YNR060W	YJR124C	P47159	448 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	YPL062W	Q02781	134 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	UTP5	Q04177	643 aa	Known RBP	4.12	□□□□□ -1.75
FRE4	YNR060W	HFD1	Q04458	532 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	EST2	Q06163	884 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	TRE2	Q08693	809 aa		4.12	□□□□□ -1.75
FRE4	YNR060W	HTS1	P07263	546 aa	Known RBP	4.11	□□□□□ -1.75
FRE4	YNR060W	RPN12	P32496	274 aa		4.11	□□□□□ -1.75
FRE4	YNR060W	AFR1	P33304	620 aa		4.11	□□□□□ -1.75
FRE4	YNR060W	NEM1	P38757	446 aa		4.11	□□□□□ -1.75
FRE4	YNR060W	YJL181W	P46987	611 aa		4.11	□□□□□ -1.75
FRE4	YNR060W	GPM1	P00950	247 aa	Known RBP	4.1	□□□□□ -1.75
FRE4	YNR060W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
FRE4	YNR060W	DED1	P06634	604 aa	Known RBP	4.1	□□□□□ -1.75
FRE4	YNR060W	RAD53	P22216	821 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	EXO84	P38261	753 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	SHU2	P38957	223 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	HOS4	P40480	1083 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	LSB6	P42951	607 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	RSC8	P43609	557 aa	Known RBP	4.1	□□□□□ -1.75
FRE4	YNR060W	RSC2	Q06488	889 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	RRI2	Q12348	645 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	PDC5	P16467	563 aa	Known RBP	4.1	□□□□□ -1.75
FRE4	YNR060W	APA1	P16550	321 aa	Known RBP	4.1	□□□□□ -1.75
FRE4	YNR060W	SPC29	P33419	253 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	YEL1	P34225	687 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	ADD66	P36040	267 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	NIT2	P47016	307 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	YJR096W	P47137	282 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	JJJ3	P47138	172 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	ENT2	Q05785	613 aa		4.1	□□□□□ -1.75
FRE4	YNR060W	RRP6	Q12149	733 aa	Known RBP	4.1	□□□□□ -1.75
FRE4	YNR060W	SFL1	P20134	766 aa		4.09	□□□□□ -1.75
FRE4	YNR060W	NAR1	P23503	491 aa	Known RBP	4.09	□□□□□ -1.75
FRE4	YNR060W	DOM34	P33309	386 aa		4.09	□□□□□ -1.75
FRE4	YNR060W	MFT1	P33441	392 aa	Known RBP	4.09	□□□□□ -1.75
FRE4	YNR060W	CEM1	P39525	442 aa		4.09	□□□□□ -1.75
FRE4	YNR060W	GPP2	P40106	250 aa	Known RBP	4.09	□□□□□ -1.75
FRE4	YNR060W	SLS1	P42900	643 aa		4.09	□□□□□ -1.75
FRE4	YNR060W	DUG1	P43616	481 aa	Known RBP	4.09	□□□□□ -1.75
FRE4	YNR060W	PBP1	P53297	722 aa	Known RBP	4.09	□□□□□ -1.75
FRE4	YNR060W	YPR071W	Q12346	211 aa		4.09	□□□□□ -1.75
FRE4	YNR060W	KNS1	P32350	737 aa	Predicted RBP	4.09	□□□□□ -1.76
FRE4	YNR060W	ALG2	P43636	503 aa		4.09	□□□□□ -1.76
FRE4	YNR060W	ESF2	P53743	316 aa	Known RBP	4.09	□□□□□ -1.76
FRE4	YNR060W	HAS1	Q03532	505 aa	Known RBP	4.09	□□□□□ -1.76
FRE4	YNR060W	SPO71	Q03868	1245 aa		4.09	□□□□□ -1.76
FRE4	YNR060W	GSY1	P23337	708 aa		4.08	□□□□□ -1.76
FRE4	YNR060W	PTP2	P29461	750 aa		4.08	□□□□□ -1.76
FRE4	YNR060W	MCM7	P38132	845 aa		4.08	□□□□□ -1.76
FRE4	YNR060W	PCM1	P38628	557 aa	Known RBP	4.08	□□□□□ -1.76
FRE4	YNR060W	OAF1	P39720	1047 aa	Predicted RBP	4.08	□□□□□ -1.76
FRE4	YNR060W	SAH1	P39954	449 aa	Known RBP	4.08	□□□□□ -1.76
FRE4	YNR060W	RAD18	P10862	487 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	MLS1	P30952	554 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	YKL077W	P36081	392 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	ERT1	P38140	529 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	YHL041W	P38730	149 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	CAF16	P43569	289 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	RKM2	Q03942	479 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	GIS4	Q04233	774 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	YDR306C	Q06640	478 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
FRE4	YNR060W	DBP2	P24783	546 aa	Known RBP	4.07	□□□□□ -1.76
FRE4	YNR060W	DAL3	P32459	195 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	NIC96	P34077	839 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	CKB2	P38930	258 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	GYP8	P43570	497 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	HNT2	P49775	206 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	HPF1	Q05164	967 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	YIG1	Q08956	461 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	GNT1	Q12096	491 aa		4.07	□□□□□ -1.76
FRE4	YNR060W	SGS1	P35187	1447 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	HSC82	P15108	705 aa	Known RBP	4.06	□□□□□ -1.76
FRE4	YNR060W	ALG3	P38179	458 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	RGD1	P38339	666 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	PNT1	P38969	423 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	GUP1	P53154	560 aa		4.06	□□□□□ -1.76
FRE4	YNR060W	SNP1	Q00916	300 aa	Predicted RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms