RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUB1	YNL016W	SMC1	P32908	1225 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	BLI1	P35727	113 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	NIT1	P40447	199 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	YGR237C	P50089	785 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	SUT1	P53032	299 aa	Known RBP	4.64	□□□□□ -1.67
PUB1	YNL016W	UBX4	P54730	416 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	TGL2	P54857	326 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	TFB2	Q02939	513 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	UGO1	Q03327	502 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	BSC2	Q05611	235 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	SYT1	Q06836	1226 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	SPO75	Q07798	868 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	FMP25	Q08023	583 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	FAL1	Q12099	399 aa	Known RBP	4.64	□□□□□ -1.67
PUB1	YNL016W	OSH2	Q12451	1283 aa		4.64	□□□□□ -1.67
PUB1	YNL016W	PGI1	P12709	554 aa	Known RBP	4.63	□□□□□ -1.67
PUB1	YNL016W	HSC82	P15108	705 aa	Known RBP	4.63	□□□□□ -1.67
PUB1	YNL016W	HSP60	P19882	572 aa	Known RBP	4.63	□□□□□ -1.67
PUB1	YNL016W	VAC17	P25591	423 aa		4.63	□□□□□ -1.67
PUB1	YNL016W	TRZ1	P36159	838 aa	Predicted RBP	4.63	□□□□□ -1.67
PUB1	YNL016W	YBR184W	P38299	523 aa		4.63	□□□□□ -1.67
PUB1	YNL016W	VID27	P40157	782 aa		4.63	□□□□□ -1.67
PUB1	YNL016W	RRT14	P40470	206 aa		4.63	□□□□□ -1.67
PUB1	YNL016W	GPP1	P41277	250 aa	Known RBP	4.63	□□□□□ -1.67
PUB1	YNL016W	PMT3	P47190	753 aa		4.63	□□□□□ -1.67
PUB1	YNL016W	DUS1	P53759	423 aa	Known RBP	4.63	□□□□□ -1.67
PUB1	YNL016W	EEB1	Q02891	456 aa		4.63	□□□□□ -1.67
PUB1	YNL016W	YPL109C	Q02981	657 aa		4.63	□□□□□ -1.67
PUB1	YNL016W	DAL4	Q04895	635 aa		4.63	□□□□□ -1.67
PUB1	YNL016W	RTT10	Q08924	1013 aa		4.63	□□□□□ -1.67
PUB1	YNL016W	NYV1	Q12255	253 aa		4.63	□□□□□ -1.67
PUB1	YNL016W	SWI5	P08153	709 aa		4.62	□□□□□ -1.67
PUB1	YNL016W	MRPL33	P20084	86 aa		4.62	□□□□□ -1.67
PUB1	YNL016W	HXT5	P38695	592 aa		4.62	□□□□□ -1.67
PUB1	YNL016W	PEA2	P40091	420 aa		4.62	□□□□□ -1.67
PUB1	YNL016W	GPG1	P53130	126 aa		4.62	□□□□□ -1.67
PUB1	YNL016W	COG6	P53959	839 aa		4.62	□□□□□ -1.67
PUB1	YNL016W	MDM1	Q01846	1127 aa		4.62	□□□□□ -1.67
PUB1	YNL016W	REC8	Q12188	680 aa		4.62	□□□□□ -1.67
PUB1	YNL016W	SNU66	Q12420	587 aa	Predicted RBP	4.62	□□□□□ -1.67
PUB1	YNL016W	MPH2	P0CD99	609 aa		4.61	□□□□□ -1.67
PUB1	YNL016W	SST2	P11972	698 aa	Known RBP	4.61	□□□□□ -1.67
PUB1	YNL016W	BAS1	P22035	811 aa		4.61	□□□□□ -1.67
PUB1	YNL016W	AGP1	P25376	633 aa		4.61	□□□□□ -1.67
PUB1	YNL016W	YBR071W	P38243	211 aa		4.61	□□□□□ -1.67
PUB1	YNL016W	ETP1	P38748	585 aa	Known RBP	4.61	□□□□□ -1.67
PUB1	YNL016W	EMW1	P42842	904 aa	Known RBP	4.61	□□□□□ -1.67
PUB1	YNL016W	PFD1	P46988	109 aa		4.61	□□□□□ -1.67
PUB1	YNL016W	HLJ1	P48353	224 aa		4.61	□□□□□ -1.67
PUB1	YNL016W	RTA1	P53047	317 aa		4.61	□□□□□ -1.67
PUB1	YNL016W	MAL11	P53048	616 aa		4.61	□□□□□ -1.67
PUB1	YNL016W	SHE9	Q04172	456 aa		4.61	□□□□□ -1.67
PUB1	YNL016W	YCS4	Q06156	1176 aa		4.61	□□□□□ -1.67
PUB1	YNL016W	OSM1	P21375	501 aa	Known RBP	4.6	□□□□□ -1.67
PUB1	YNL016W	NPR1	P22211	790 aa		4.6	□□□□□ -1.67
PUB1	YNL016W	MCM5	P29496	775 aa	Known RBP	4.6	□□□□□ -1.67
PUB1	YNL016W	MAL31	P38156	614 aa		4.6	□□□□□ -1.67
PUB1	YNL016W	PIC2	P40035	300 aa		4.6	□□□□□ -1.67
PUB1	YNL016W	ERP6	P53198	216 aa		4.6	□□□□□ -1.67
PUB1	YNL016W	ALO1	P54783	526 aa	Known RBP	4.6	□□□□□ -1.67
PUB1	YNL016W	UME1	Q03010	460 aa		4.6	□□□□□ -1.67
PUB1	YNL016W	ADI1	Q03677	179 aa		4.6	□□□□□ -1.67
PUB1	YNL016W	RLP24	Q07915	199 aa	Known RBP	4.6	□□□□□ -1.67
PUB1	YNL016W	RTP1	Q12751	981 aa		4.6	□□□□□ -1.67
PUB1	YNL016W	POM152	P39685	1337 aa		4.6	□□□□□ -1.67
PUB1	YNL016W	NUP145	P49687	1317 aa		4.6	□□□□□ -1.67
PUB1	YNL016W	YLR278C	Q05854	1341 aa		4.6	□□□□□ -1.67
PUB1	YNL016W	GCR1	P07261	785 aa		4.59	□□□□□ -1.67
PUB1	YNL016W	KAR2	P16474	682 aa	Known RBP	4.59	□□□□□ -1.67
PUB1	YNL016W	PEX6	P33760	1030 aa		4.59	□□□□□ -1.67
PUB1	YNL016W	MRP8	P35719	219 aa		4.59	□□□□□ -1.67
PUB1	YNL016W	IRR1	P40541	1150 aa		4.59	□□□□□ -1.67
PUB1	YNL016W	HXT8	P40886	569 aa		4.59	□□□□□ -1.67
PUB1	YNL016W	GNP1	P48813	663 aa		4.59	□□□□□ -1.67
PUB1	YNL016W	SPC105	P53148	917 aa		4.59	□□□□□ -1.67
PUB1	YNL016W	UTP8	P53276	713 aa	Known RBP	4.59	□□□□□ -1.67
PUB1	YNL016W	CWC22	P53333	577 aa	Known RBP	4.59	□□□□□ -1.67
PUB1	YNL016W	YNL193W	P53870	558 aa		4.59	□□□□□ -1.67
PUB1	YNL016W	YNL034W	P53963	612 aa		4.59	□□□□□ -1.67
PUB1	YNL016W	YNL018C	P53976	612 aa		4.59	□□□□□ -1.67
PUB1	YNL016W	THI73	Q07904	523 aa		4.59	□□□□□ -1.67
PUB1	YNL016W	INP54	Q08227	384 aa	Known RBP	4.59	□□□□□ -1.67
PUB1	YNL016W	TMA46	Q12000	345 aa	Known RBP	4.59	□□□□□ -1.67
PUB1	YNL016W	FLP1	P03870	423 aa		4.58	□□□□□ -1.68
PUB1	YNL016W	DAL5	P15365	543 aa		4.58	□□□□□ -1.68
PUB1	YNL016W	OPI1	P21957	404 aa		4.58	□□□□□ -1.68
PUB1	YNL016W	SBA1	P28707	216 aa	Known RBP	4.58	□□□□□ -1.68
PUB1	YNL016W	EUG1	P32474	517 aa		4.58	□□□□□ -1.68
PUB1	YNL016W	HSE1	P38753	452 aa		4.58	□□□□□ -1.68
PUB1	YNL016W	NTA1	P40354	457 aa		4.58	□□□□□ -1.68
PUB1	YNL016W	PIP2	P52960	996 aa		4.58	□□□□□ -1.68
PUB1	YNL016W	KRE33	P53914	1056 aa	Known RBP	4.58	□□□□□ -1.68
PUB1	YNL016W	YMR265C	Q03508	461 aa	Known RBP	4.58	□□□□□ -1.68
PUB1	YNL016W	ATG20	Q07528	640 aa		4.58	□□□□□ -1.68
PUB1	YNL016W	YLR001C	Q07895	862 aa		4.58	□□□□□ -1.68
PUB1	YNL016W	CTI6	Q08923	506 aa		4.58	□□□□□ -1.68
PUB1	YNL016W	MPD2	Q99316	277 aa		4.58	□□□□□ -1.68
PUB1	YNL016W	MCM1	P11746	286 aa		4.57	□□□□□ -1.68
PUB1	YNL016W	RET1	P22276	1149 aa	Known RBP	4.57	□□□□□ -1.68
PUB1	YNL016W	SSH4	P32343	579 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms