RNA–Protein interactions for RNA: YMR110C

HFD1, Transcript of Hexadecenal dehydrogenase, yeast

Gene HFD1, Length 1,599 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFD1	YMR110C	ALE1	Q08548	619 aa		4.6	□□□□□ -1.67
HFD1	YMR110C	YLR278C	Q05854	1341 aa		4.6	□□□□□ -1.67
HFD1	YMR110C	LPD1	P09624	499 aa	Known RBP	4.59	□□□□□ -1.67
HFD1	YMR110C	CAF20	P12962	161 aa	Known RBP	4.59	□□□□□ -1.67
HFD1	YMR110C	ICL1	P28240	557 aa	Predicted RBP	4.59	□□□□□ -1.67
HFD1	YMR110C	YGR045C	P53229	120 aa		4.59	□□□□□ -1.67
HFD1	YMR110C	ERO1	Q03103	563 aa		4.59	□□□□□ -1.67
HFD1	YMR110C	TAD3	Q9URQ3	322 aa		4.59	□□□□□ -1.67
HFD1	YMR110C	SER1	P33330	395 aa	Known RBP	4.58	□□□□□ -1.68
HFD1	YMR110C	PDS5	Q04264	1277 aa		4.58	□□□□□ -1.68
HFD1	YMR110C	AVO1	Q08236	1176 aa		4.58	□□□□□ -1.68
HFD1	YMR110C	YPL277C	Q08989	487 aa		4.58	□□□□□ -1.68
HFD1	YMR110C	RET1	P22276	1149 aa	Known RBP	4.57	□□□□□ -1.68
HFD1	YMR110C	KCC4	P25389	1037 aa		4.57	□□□□□ -1.68
HFD1	YMR110C	YGL082W	P53155	381 aa		4.57	□□□□□ -1.68
HFD1	YMR110C	PAP2	P53632	584 aa	Known RBP	4.57	□□□□□ -1.68
HFD1	YMR110C	BDF2	Q07442	638 aa		4.57	□□□□□ -1.68
HFD1	YMR110C	RPS13	P05756	151 aa	Known RBP	4.57	□□□□□ -1.68
HFD1	YMR110C	SHC1	P39000	512 aa		4.57	□□□□□ -1.68
HFD1	YMR110C	YFR016C	P43597	1233 aa	Known RBP	4.57	□□□□□ -1.68
HFD1	YMR110C	FOL2	P51601	243 aa	Known RBP	4.57	□□□□□ -1.68
HFD1	YMR110C	RAT1	Q02792	1006 aa	Known RBP	4.57	□□□□□ -1.68
HFD1	YMR110C	IRC3	Q06683	689 aa		4.57	□□□□□ -1.68
HFD1	YMR110C	TUB2	P02557	457 aa	Known RBP	4.56	□□□□□ -1.68
HFD1	YMR110C	DUR3	P33413	735 aa		4.56	□□□□□ -1.68
HFD1	YMR110C	DUS1	P53759	423 aa	Known RBP	4.56	□□□□□ -1.68
HFD1	YMR110C	SNO2	P53823	222 aa		4.56	□□□□□ -1.68
HFD1	YMR110C	MDG1	P53885	366 aa		4.56	□□□□□ -1.68
HFD1	YMR110C	CLU1	Q03690	1277 aa	Known RBP	4.56	□□□□□ -1.68
HFD1	YMR110C	YLR358C	O13565	187 aa		4.55	□□□□□ -1.68
HFD1	YMR110C	YKU70	P32807	602 aa		4.55	□□□□□ -1.68
HFD1	YMR110C	SHM2	P37291	469 aa	Known RBP	4.55	□□□□□ -1.68
HFD1	YMR110C	ARL1	P38116	183 aa	Known RBP	4.55	□□□□□ -1.68
HFD1	YMR110C	RSC4	Q02206	625 aa		4.55	□□□□□ -1.68
HFD1	YMR110C	UBP16	Q02863	499 aa		4.55	□□□□□ -1.68
HFD1	YMR110C	PUS7	Q08647	676 aa	Known RBP	4.55	□□□□□ -1.68
HFD1	YMR110C	PNS1	Q12412	539 aa		4.55	□□□□□ -1.68
HFD1	YMR110C	POM152	P39685	1337 aa		4.54	□□□□□ -1.68
HFD1	YMR110C	RRP46	P53256	223 aa	Predicted RBP	4.54	□□□□□ -1.68
HFD1	YMR110C	TPP1	Q03796	238 aa		4.54	□□□□□ -1.68
HFD1	YMR110C	NOB1	Q08444	459 aa	Known RBP	4.54	□□□□□ -1.68
HFD1	YMR110C	SSP2	Q08646	371 aa		4.54	□□□□□ -1.68
HFD1	YMR110C	RPS9B	P05755	195 aa	Known RBP	4.53	□□□□□ -1.68
HFD1	YMR110C	BOL3	P39724	118 aa		4.53	□□□□□ -1.68
HFD1	YMR110C	GRX6	Q12438	231 aa		4.53	□□□□□ -1.68
HFD1	YMR110C	CTS1	P29029	562 aa		4.53	□□□□□ -1.69
HFD1	YMR110C	APL2	P36000	726 aa	Predicted RBP	4.53	□□□□□ -1.69
HFD1	YMR110C	DIB1	Q06819	143 aa	Predicted RBP	4.53	□□□□□ -1.69
HFD1	YMR110C	FRD1	P32614	470 aa	Known RBP	4.52	□□□□□ -1.69
HFD1	YMR110C	YIL089W	P40500	205 aa		4.52	□□□□□ -1.69
HFD1	YMR110C	UFD2	P54860	961 aa		4.52	□□□□□ -1.69
HFD1	YMR110C	VPS13	Q07878	3144 aa		4.52	□□□□□ -1.69
HFD1	YMR110C	SSK22	P25390	1331 aa	Predicted RBP	4.51	□□□□□ -1.69
HFD1	YMR110C	YHL012W	P38709	493 aa		4.51	□□□□□ -1.69
HFD1	YMR110C	SYF1	Q04048	859 aa	Predicted RBP	4.51	□□□□□ -1.69
HFD1	YMR110C	LYS2	P07702	1392 aa		4.5	□□□□□ -1.69
HFD1	YMR110C	GSC2	P40989	1895 aa		4.5	□□□□□ -1.69
HFD1	YMR110C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
HFD1	YMR110C	ZDS2	P54786	942 aa		4.5	□□□□□ -1.69
HFD1	YMR110C	TIM50	Q02776	476 aa		4.5	□□□□□ -1.69
HFD1	YMR110C	PMT7	Q06644	662 aa		4.5	□□□□□ -1.69
HFD1	YMR110C	HAT1	Q12341	374 aa		4.5	□□□□□ -1.69
HFD1	YMR110C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.49	□□□□□ -1.69
HFD1	YMR110C	TY1A-DR6	P0CX70	440 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	TY1A-ER1	P0CX71	440 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	TY1A-LR2	P0CX72	440 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	TY1A-PL	P0CX73	440 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	TY1A-JR1	P0CX74	440 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	TY1A-LR3	P0CX75	440 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	TY1A-ML2	P0CX76	440 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	MSM1	P22438	575 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	MDL2	P33311	773 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	STV1	P37296	890 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	VPS4	P52917	437 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	YNL050C	P53952	270 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	VPS64	Q03944	604 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	TY1A-GR1	Q12085	440 aa		4.49	□□□□□ -1.69
HFD1	YMR110C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.49	□□□□□ -1.69
HFD1	YMR110C	TY1A-OL	Q92392	440 aa	Known RBP	4.49	□□□□□ -1.69
HFD1	YMR110C	TAO3	P40468	2376 aa		4.48	□□□□□ -1.69
HFD1	YMR110C	SAM35	P14693	329 aa		4.48	□□□□□ -1.69
HFD1	YMR110C	YPT53	P36019	220 aa		4.48	□□□□□ -1.69
HFD1	YMR110C	PEA2	P40091	420 aa		4.48	□□□□□ -1.69
HFD1	YMR110C	YAF9	P53930	226 aa		4.48	□□□□□ -1.69
HFD1	YMR110C	TRM44	Q02648	567 aa	Known RBP	4.48	□□□□□ -1.69
HFD1	YMR110C	NSE3	Q05541	303 aa		4.48	□□□□□ -1.69
HFD1	YMR110C	DUR1,2	P32528	1835 aa	Known RBP	4.48	□□□□□ -1.69
HFD1	YMR110C	YPR117W	Q06116	2489 aa		4.48	□□□□□ -1.69
HFD1	YMR110C	COQ4	O13525	335 aa		4.48	□□□□□ -1.69
HFD1	YMR110C	YKL077W	P36081	392 aa		4.48	□□□□□ -1.69
HFD1	YMR110C	FLP1	P03870	423 aa		4.47	□□□□□ -1.69
HFD1	YMR110C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	not detected
HFD1	YMR110C	NUT1	P53114	1132 aa		4.47	□□□□□ -1.69
HFD1	YMR110C	YGR117C	P53270	476 aa		4.47	□□□□□ -1.69
HFD1	YMR110C	FCP1	Q03254	732 aa		4.47	□□□□□ -1.69
HFD1	YMR110C	YOR352W	Q08816	343 aa		4.47	□□□□□ -1.69
HFD1	YMR110C	FLO11	P08640	1367 aa		4.47	□□□□□ -1.69
HFD1	YMR110C	HPR1	P17629	752 aa	Known RBP	4.46	□□□□□ -1.7
HFD1	YMR110C	MCM5	P29496	775 aa	Known RBP	4.46	□□□□□ -1.7
HFD1	YMR110C	AFG2	P32794	780 aa		4.46	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms