RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C HEM13P11353 328 aaKnown RBP6.09□□□□□ -1.43
CCS1YMR038C CAF20P12962 161 aaKnown RBP6.09□□□□□ -1.43
CCS1YMR038C MSH3P25336 1018 aa6.09□□□□□ -1.43
CCS1YMR038C MAE1P36013 669 aaKnown RBP6.09□□□□□ -1.43
CCS1YMR038C PAM1P37304 830 aaKnown RBP6.09□□□□□ -1.43
CCS1YMR038C PEX28P38848 579 aa6.09□□□□□ -1.43
CCS1YMR038C SKN7P38889 622 aa6.09□□□□□ -1.43
CCS1YMR038C GCV1P48015 400 aa6.09□□□□□ -1.43
CCS1YMR038C NCS6P53088 359 aa6.09□□□□□ -1.43
CCS1YMR038C DSD1P53095 428 aa6.09□□□□□ -1.43
CCS1YMR038C PEX13P80667 386 aa6.09□□□□□ -1.43
CCS1YMR038C MCD1Q12158 566 aa6.09□□□□□ -1.43
CCS1YMR038C SFA1P32771 386 aa6.08□□□□□ -1.44
CCS1YMR038C SQT1P35184 431 aa6.08□□□□□ -1.44
CCS1YMR038C NEM1P38757 446 aa6.08□□□□□ -1.44
CCS1YMR038C SHU2P38957 223 aa6.08□□□□□ -1.44
CCS1YMR038C PEA2P40091 420 aa6.08□□□□□ -1.44
CCS1YMR038C YFR016CP43597 1233 aaKnown RBP6.08□□□□□ -1.44
CCS1YMR038C YGL140CP53120 1219 aa6.08□□□□□ -1.44
CCS1YMR038C MDG1P53885 366 aa6.08□□□□□ -1.44
CCS1YMR038C RMT2Q03305 412 aa6.08□□□□□ -1.44
CCS1YMR038C ESF1Q06344 628 aaKnown RBP6.08□□□□□ -1.44
CCS1YMR038C UTP10P42945 1769 aaKnown RBP6.08□□□□□ -1.44
CCS1YMR038C PEP7P32609 515 aa6.07□□□□□ -1.44
CCS1YMR038C YKL077WP36081 392 aa6.07□□□□□ -1.44
CCS1YMR038C SLS1P42900 643 aa6.07□□□□□ -1.44
CCS1YMR038C TIM50Q02776 476 aa6.07□□□□□ -1.44
CCS1YMR038C RMD1Q03441 430 aa6.07□□□□□ -1.44
CCS1YMR038C DIB1Q06819 143 aaPredicted RBP6.07□□□□□ -1.44
CCS1YMR038C PMD1P32634 1753 aa6.07□□□□□ -1.44
CCS1YMR038C SEC23P15303 768 aaKnown RBP6.06□□□□□ -1.44
CCS1YMR038C RDH54P38086 958 aa6.06□□□□□ -1.44
CCS1YMR038C YGL082WP53155 381 aa6.06□□□□□ -1.44
CCS1YMR038C NCE103P53615 221 aa6.06□□□□□ -1.44
CCS1YMR038C FAR11P53917 953 aa6.06□□□□□ -1.44
CCS1YMR038C PUS1Q12211 544 aaKnown RBP6.06□□□□□ -1.44
CCS1YMR038C TRM44Q02648 567 aaKnown RBP6.05□□□□□ -1.44
CCS1YMR038C AKL1P38080 1108 aaKnown RBP6.04□□□□□ -1.44
CCS1YMR038C ARL1P38116 183 aaKnown RBP6.04□□□□□ -1.44
CCS1YMR038C REI1P38344 393 aaPredicted RBP6.04□□□□□ -1.44
CCS1YMR038C ARI1P53111 347 aaKnown RBP6.04□□□□□ -1.44
CCS1YMR038C PAP2P53632 584 aaKnown RBP6.04□□□□□ -1.44
CCS1YMR038C CTF4Q01454 927 aa6.04□□□□□ -1.44
CCS1YMR038C UTP5Q04177 643 aaKnown RBP6.04□□□□□ -1.44
CCS1YMR038C PDS5Q04264 1277 aa6.04□□□□□ -1.44
CCS1YMR038C ALE1Q08548 619 aa6.04□□□□□ -1.44
CCS1YMR038C MCA1Q08601 432 aa6.04□□□□□ -1.44
CCS1YMR038C ALG6Q12001 544 aaKnown RBP6.04□□□□□ -1.44
CCS1YMR038C REC8Q12188 680 aa6.04□□□□□ -1.44
CCS1YMR038C VMA4P22203 233 aaKnown RBP6.03□□□□□ -1.44
CCS1YMR038C RSC6P25632 483 aa6.03□□□□□ -1.44
CCS1YMR038C TAT1P38085 619 aa6.03□□□□□ -1.44
CCS1YMR038C GNP1P48813 663 aa6.03□□□□□ -1.44
CCS1YMR038C YOR223WQ12015 292 aa6.03□□□□□ -1.44
CCS1YMR038C GCR1P07261 785 aa6.02□□□□□ -1.45
CCS1YMR038C FRD1P32614 470 aaKnown RBP6.02□□□□□ -1.45
CCS1YMR038C MAL31P38156 614 aa6.02□□□□□ -1.45
CCS1YMR038C YGR117CP53270 476 aa6.02□□□□□ -1.45
CCS1YMR038C SVF1Q05515 481 aa6.02□□□□□ -1.45
CCS1YMR038C AOS1Q06624 347 aa6.02□□□□□ -1.45
CCS1YMR038C HDA2Q06629 674 aa6.02□□□□□ -1.45
CCS1YMR038C YLL054CQ12244 843 aa6.02□□□□□ -1.45
CCS1YMR038C HPR1P17629 752 aaKnown RBP6.01□□□□□ -1.45
CCS1YMR038C SPO74P45819 413 aa6.01□□□□□ -1.45
CCS1YMR038C YGR045CP53229 120 aa6.01□□□□□ -1.45
CCS1YMR038C DOT1Q04089 582 aaKnown RBP6.01□□□□□ -1.45
CCS1YMR038C CSR2Q12734 1121 aa6.01□□□□□ -1.45
CCS1YMR038C SCP160P06105 1222 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
CCS1YMR038C KCC4P25389 1037 aa6□□□□□ -1.45
CCS1YMR038C DUT1P33317 147 aa6□□□□□ -1.45
CCS1YMR038C PGM1P33401 570 aaKnown RBP6□□□□□ -1.45
CCS1YMR038C PET112P33893 541 aa6□□□□□ -1.45
CCS1YMR038C CCT8P47079 568 aaKnown RBP6□□□□□ -1.45
CCS1YMR038C VPS4P52917 437 aa6□□□□□ -1.45
CCS1YMR038C TAF13P11747 167 aa5.99□□□□□ -1.45
CCS1YMR038C GPT2P36148 743 aa5.99□□□□□ -1.45
CCS1YMR038C HXT13P39924 564 aa5.99□□□□□ -1.45
CCS1YMR038C HXT17P53631 564 aa5.99□□□□□ -1.45
CCS1YMR038C HXT15P54854 567 aa5.99□□□□□ -1.45
CCS1YMR038C YPL034WQ03083 165 aa5.99□□□□□ -1.45
CCS1YMR038C CRF1Q04930 467 aa5.99□□□□□ -1.45
CCS1YMR038C JIP5Q06214 492 aaPredicted RBP5.99□□□□□ -1.45
CCS1YMR038C MRL1Q06815 381 aa5.99□□□□□ -1.45
CCS1YMR038C NAM7P30771 971 aaKnown RBP5.98□□□□□ -1.45
CCS1YMR038C MNR2P35724 969 aa5.98□□□□□ -1.45
CCS1YMR038C ADD66P36040 267 aa5.98□□□□□ -1.45
CCS1YMR038C APE3P37302 537 aaKnown RBP5.98□□□□□ -1.45
CCS1YMR038C PNT1P38969 423 aa5.98□□□□□ -1.45
CCS1YMR038C RRT6P53117 311 aaPredicted RBP5.98□□□□□ -1.45
CCS1YMR038C ELA1P53861 379 aaPredicted RBP5.98□□□□□ -1.45
CCS1YMR038C SIW14P53965 281 aa5.98□□□□□ -1.45
CCS1YMR038C SYF1Q04048 859 aaPredicted RBP5.98□□□□□ -1.45
CCS1YMR038C SSP2Q08646 371 aa5.98□□□□□ -1.45
CCS1YMR038C FBP1P09201 348 aa5.97□□□□□ -1.45
CCS1YMR038C CDC34P14682 295 aa5.97□□□□□ -1.45
CCS1YMR038C AFG2P32794 780 aa5.97□□□□□ -1.45
CCS1YMR038C APL2P36000 726 aaPredicted RBP5.97□□□□□ -1.45
CCS1YMR038C AKR1P39010 764 aa5.97□□□□□ -1.45
CCS1YMR038C MSH4P40965 878 aaPredicted RBP5.97□□□□□ -1.45
CCS1YMR038C ROD1Q02805 837 aa5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms