RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR3	YLR442C	ARC19	P33204	171 aa	Known RBP	2.75	□□□□□ -1.97
SIR3	YLR442C	COY1	P34237	679 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	IRS4	P36115	615 aa	Known RBP	2.75	□□□□□ -1.97
SIR3	YLR442C	PAF1	P38351	445 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	OTU2	P38747	307 aa	Known RBP	2.75	□□□□□ -1.97
SIR3	YLR442C	HSE1	P38753	452 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	CWC15	Q03772	175 aa	Known RBP	2.75	□□□□□ -1.97
SIR3	YLR442C	ATG16	Q03818	150 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	DOT1	Q04089	582 aa	Known RBP	2.75	□□□□□ -1.97
SIR3	YLR442C	NFI1	Q12216	726 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	SGS1	P35187	1447 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	FOB1	O13329	566 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	KSS1	P14681	368 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	KAR3	P17119	729 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	ADP1	P25371	1049 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	VPH1	P32563	840 aa	Known RBP	2.75	□□□□□ -1.97
SIR3	YLR442C	MTC2	P34246	357 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	ABZ1	P37254	787 aa	Predicted RBP	2.75	□□□□□ -1.97
SIR3	YLR442C	FUI1	P38196	639 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	RAD55	P38953	406 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	PES4	P39684	611 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	PSY2	P40164	858 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	PXA1	P41909	870 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	DAK2	P43550	591 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	YJR142W	P47173	342 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	JJJ1	P53863	590 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	TSR2	Q06672	205 aa	Known RBP	2.75	□□□□□ -1.97
SIR3	YLR442C	YIG1	Q08956	461 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	STF1	P01098	86 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	CLC1	P17891	233 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	PUP1	P25043	261 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.75	□□□□□ -1.97	not detected
SIR3	YLR442C	CAJ1	P39101	391 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	SRB7	P47822	140 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	ALT1	P52893	592 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	YNL058C	P53947	316 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	CTR9	P89105	1077 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	YMR074C	Q04773	145 aa		2.75	□□□□□ -1.97
SIR3	YLR442C	LPX1	Q12405	387 aa	Known RBP	2.75	□□□□□ -1.97
SIR3	YLR442C	RXT2	P38255	430 aa		2.74	□□□□□ -1.97
SIR3	YLR442C	REI1	P38344	393 aa	Predicted RBP	2.74	□□□□□ -1.97
SIR3	YLR442C	DAS1	P47005	663 aa		2.74	□□□□□ -1.97
SIR3	YLR442C	SEN54	Q02825	467 aa	Predicted RBP	2.74	□□□□□ -1.97
SIR3	YLR442C	SPO20	Q04359	397 aa		2.74	□□□□□ -1.97
SIR3	YLR442C	ATG38	Q05789	226 aa	Known RBP	2.74	□□□□□ -1.97
SIR3	YLR442C	ARR1	Q06596	294 aa		2.74	□□□□□ -1.97
SIR3	YLR442C	HOM3	P10869	527 aa		2.74	□□□□□ -1.97
SIR3	YLR442C	HOM2	P13663	365 aa	Known RBP	2.74	□□□□□ -1.97
SIR3	YLR442C	POP2	P39008	433 aa		2.74	□□□□□ -1.97
SIR3	YLR442C	UTP18	P40362	594 aa	Predicted RBP	2.74	□□□□□ -1.97
SIR3	YLR442C	VTC2	P43585	828 aa		2.74	□□□□□ -1.97
SIR3	YLR442C	SMC3	P47037	1230 aa		2.74	□□□□□ -1.97
SIR3	YLR442C	ENT3	P47160	408 aa		2.74	□□□□□ -1.97
SIR3	YLR442C	NUP84	P52891	726 aa		2.74	□□□□□ -1.97
SIR3	YLR442C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
SIR3	YLR442C	RPS4A	P0CX35	261 aa	Known RBP	2.73	□□□□□ -1.97
SIR3	YLR442C	RPS4B	P0CX36	261 aa	Known RBP	2.73	□□□□□ -1.97
SIR3	YLR442C	PGS1	P25578	521 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	KRR1	P25586	316 aa	Predicted RBP	2.73	□□□□□ -1.97
SIR3	YLR442C	PEX7	P39108	375 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	SUT1	P53032	299 aa	Known RBP	2.73	□□□□□ -1.97
SIR3	YLR442C	UTP22	P53254	1237 aa	Predicted RBP	2.73	□□□□□ -1.97
SIR3	YLR442C	SSY1	Q03770	852 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	NDL1	Q06568	189 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	HNM1	P19807	563 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
SIR3	YLR442C	BUD14	P27637	709 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	SMC1	P32908	1225 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	YKL050C	P35736	922 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	UIP5	P36137	443 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	ESL2	P36168	1195 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	ARL1	P38116	183 aa	Known RBP	2.73	□□□□□ -1.97
SIR3	YLR442C	RKM3	P38222	552 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	SIC1	P38634	284 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	YHR020W	P38708	688 aa	Known RBP	2.73	□□□□□ -1.97
SIR3	YLR442C	APE4	P38821	490 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	SPT8	P38915	602 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	MNN1	P39106	762 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	MEF2	P39677	819 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	IRR1	P40541	1150 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	SFB2	P53953	876 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	SNZ1	Q03148	297 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	SWA2	Q06677	668 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	YOR352W	Q08816	343 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	TRE1	Q08919	783 aa		2.73	□□□□□ -1.97
SIR3	YLR442C	BRR1	Q99177	341 aa	Predicted RBP	2.73	□□□□□ -1.97
SIR3	YLR442C	GRX4	P32642	244 aa		2.72	□□□□□ -1.97
SIR3	YLR442C	APL2	P36000	726 aa	Predicted RBP	2.72	□□□□□ -1.97
SIR3	YLR442C	YEN1	P40028	759 aa		2.72	□□□□□ -1.97
SIR3	YLR442C	IOC3	P43596	787 aa		2.72	□□□□□ -1.97
SIR3	YLR442C	ENP2	P48234	707 aa	Known RBP	2.72	□□□□□ -1.97
SIR3	YLR442C	SHE10	P53075	577 aa		2.72	□□□□□ -1.97
SIR3	YLR442C	YNL050C	P53952	270 aa		2.72	□□□□□ -1.97
SIR3	YLR442C	VPS30	Q02948	557 aa		2.72	□□□□□ -1.97
SIR3	YLR442C	RRN11	Q04712	507 aa		2.72	□□□□□ -1.97
SIR3	YLR442C	RRP9	Q06506	573 aa	Known RBP	2.72	□□□□□ -1.97
SIR3	YLR442C	RTC5	Q12108	567 aa	Known RBP	2.72	□□□□□ -1.97
SIR3	YLR442C	RKM4	Q12504	494 aa		2.72	□□□□□ -1.97
SIR3	YLR442C	SUP35	P05453	685 aa	Known RBP	2.72	□□□□□ -1.97
SIR3	YLR442C	MET6	P05694	767 aa	Known RBP	2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms