RNA–Protein interactions for RNA: YLL002W

RTT109, Transcript of Histone acetyltransferase, yeast

Gene RTT109, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTT109	YLL002W	RPS4B	P0CX36	261 aa	Known RBP	4.79	□□□□□ -1.64
RTT109	YLL002W	PRI2	P20457	528 aa		4.79	□□□□□ -1.64
RTT109	YLL002W	RET1	P22276	1149 aa	Known RBP	4.79	□□□□□ -1.64
RTT109	YLL002W	RNQ1	P25367	405 aa		4.79	□□□□□ -1.64
RTT109	YLL002W	LRG1	P35688	1017 aa		4.79	□□□□□ -1.64
RTT109	YLL002W	MCM7	P38132	845 aa		4.79	□□□□□ -1.64
RTT109	YLL002W	MMM1	P41800	426 aa		4.79	□□□□□ -1.64
RTT109	YLL002W	TYW3	P53177	273 aa		4.79	□□□□□ -1.64
RTT109	YLL002W	TPP1	Q03796	238 aa		4.79	□□□□□ -1.64
RTT109	YLL002W	RSA3	Q05942	220 aa	Known RBP	4.79	□□□□□ -1.64
RTT109	YLL002W	YTA7	P40340	1379 aa		4.78	□□□□□ -1.64
RTT109	YLL002W	MSB1	P21339	1137 aa	Known RBP	4.78	□□□□□ -1.64
RTT109	YLL002W	LYP1	P32487	611 aa		4.78	□□□□□ -1.64
RTT109	YLL002W	DUT1	P33317	147 aa		4.78	□□□□□ -1.64
RTT109	YLL002W	RER2	P35196	286 aa		4.78	□□□□□ -1.64
RTT109	YLL002W	YAP3	P38749	330 aa		4.78	□□□□□ -1.64
RTT109	YLL002W	QNS1	P38795	714 aa	Known RBP	4.78	□□□□□ -1.64
RTT109	YLL002W	NMD3	P38861	518 aa	Known RBP	4.78	□□□□□ -1.64
RTT109	YLL002W	HXT13	P39924	564 aa		4.78	□□□□□ -1.64
RTT109	YLL002W	CNN1	P43618	361 aa		4.78	□□□□□ -1.64
RTT109	YLL002W	HXT17	P53631	564 aa		4.78	□□□□□ -1.64
RTT109	YLL002W	HXT15	P54854	567 aa		4.78	□□□□□ -1.64
RTT109	YLL002W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
RTT109	YLL002W	NSI1	Q12457	570 aa		4.78	□□□□□ -1.64
RTT109	YLL002W	IKI3	Q06706	1349 aa	Known RBP	4.78	□□□□□ -1.64
RTT109	YLL002W	BAS1	P22035	811 aa		4.77	□□□□□ -1.65
RTT109	YLL002W	WHI3	P34761	661 aa	Known RBP	4.77	□□□□□ -1.65
RTT109	YLL002W	MOT2	P34909	587 aa	Known RBP	4.77	□□□□□ -1.65
RTT109	YLL002W	CIT3	P43635	486 aa		4.77	□□□□□ -1.65
RTT109	YLL002W	EEB1	Q02891	456 aa		4.77	□□□□□ -1.65
RTT109	YLL002W	AOS1	Q06624	347 aa		4.77	□□□□□ -1.65
RTT109	YLL002W	GCN2	P15442	1659 aa		4.77	□□□□□ -1.65
RTT109	YLL002W	VPS13	Q07878	3144 aa		4.77	□□□□□ -1.65
RTT109	YLL002W	POL1	P13382	1468 aa		4.77	□□□□□ -1.65
RTT109	YLL002W	INO1	P11986	533 aa		4.76	□□□□□ -1.65
RTT109	YLL002W	DBP5	P20449	482 aa	Known RBP	4.76	□□□□□ -1.65
RTT109	YLL002W	AFG2	P32794	780 aa		4.76	□□□□□ -1.65
RTT109	YLL002W	ELM1	P32801	640 aa		4.76	□□□□□ -1.65
RTT109	YLL002W	SNF7	P39929	240 aa	Known RBP	4.76	□□□□□ -1.65
RTT109	YLL002W	HNT2	P49775	206 aa		4.76	□□□□□ -1.65
RTT109	YLL002W	ALT1	P52893	592 aa		4.76	□□□□□ -1.65
RTT109	YLL002W	YGR053C	P53234	283 aa		4.76	□□□□□ -1.65
RTT109	YLL002W	TIF35	Q04067	274 aa	Known RBP	4.76	□□□□□ -1.65
RTT109	YLL002W	YOR059C	Q08448	450 aa	Known RBP	4.76	□□□□□ -1.65
RTT109	YLL002W	PUS7	Q08647	676 aa	Known RBP	4.76	□□□□□ -1.65
RTT109	YLL002W	MLS1	P30952	554 aa		4.75	□□□□□ -1.65
RTT109	YLL002W	SEG2	P34250	1132 aa		4.75	□□□□□ -1.65
RTT109	YLL002W	RGD1	P38339	666 aa		4.75	□□□□□ -1.65
RTT109	YLL002W	GPB2	P39717	880 aa		4.75	□□□□□ -1.65
RTT109	YLL002W	YJL045W	P47052	634 aa		4.75	□□□□□ -1.65
RTT109	YLL002W	TDA5	Q06417	326 aa	Known RBP	4.75	□□□□□ -1.65
RTT109	YLL002W	OPI10	Q08202	246 aa		4.75	□□□□□ -1.65
RTT109	YLL002W	SPO21	Q12411	609 aa		4.75	□□□□□ -1.65
RTT109	YLL002W	NUP188	P52593	1655 aa	Known RBP	4.75	□□□□□ -1.65
RTT109	YLL002W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
RTT109	YLL002W	KIP1	P28742	1111 aa		4.74	□□□□□ -1.65
RTT109	YLL002W	YKL107W	P34251	309 aa		4.74	□□□□□ -1.65
RTT109	YLL002W	ENP1	P38333	483 aa	Known RBP	4.74	□□□□□ -1.65
RTT109	YLL002W	NNF1	P47149	201 aa		4.74	□□□□□ -1.65
RTT109	YLL002W	RCM1	P53972	490 aa		4.74	□□□□□ -1.65
RTT109	YLL002W	YPL260W	Q08977	551 aa		4.74	□□□□□ -1.65
RTT109	YLL002W	SSF2	Q12153	453 aa	Predicted RBP	4.74	□□□□□ -1.65
RTT109	YLL002W	ABD1	P32783	436 aa	Predicted RBP	4.73	□□□□□ -1.65
RTT109	YLL002W	YHL012W	P38709	493 aa		4.73	□□□□□ -1.65
RTT109	YLL002W	EAR1	Q03212	550 aa		4.73	□□□□□ -1.65
RTT109	YLL002W	YLR225C	Q05948	407 aa	Known RBP	4.73	□□□□□ -1.65
RTT109	YLL002W	RKM4	Q12504	494 aa		4.73	□□□□□ -1.65
RTT109	YLL002W	COQ4	O13525	335 aa		4.72	□□□□□ -1.65
RTT109	YLL002W	YGL176C	P46945	554 aa		4.72	□□□□□ -1.65
RTT109	YLL002W	ESC2	Q06340	456 aa		4.72	□□□□□ -1.65
RTT109	YLL002W	SNQ2	P32568	1501 aa	Known RBP	4.72	□□□□□ -1.65
RTT109	YLL002W	VMR1	P38735	1592 aa		4.72	□□□□□ -1.65
RTT109	YLL002W	SBA1	P28707	216 aa	Known RBP	4.72	□□□□□ -1.65
RTT109	YLL002W	YKL069W	P36088	180 aa		4.72	□□□□□ -1.65
RTT109	YLL002W	MPH1	P40562	993 aa		4.72	□□□□□ -1.65
RTT109	YLL002W	SPP382	Q06411	708 aa	Predicted RBP	4.72	□□□□□ -1.65
RTT109	YLL002W	GNT1	Q12096	491 aa		4.72	□□□□□ -1.65
RTT109	YLL002W	YVC1	Q12324	675 aa		4.72	□□□□□ -1.65
RTT109	YLL002W	IML1	P47170	1584 aa		4.71	□□□□□ -1.65
RTT109	YLL002W	GRX1	P25373	110 aa	Known RBP	4.71	□□□□□ -1.66
RTT109	YLL002W	AGP1	P25376	633 aa		4.71	□□□□□ -1.66
RTT109	YLL002W	YSC84	P32793	468 aa		4.71	□□□□□ -1.66
RTT109	YLL002W	CCZ1	P38273	704 aa		4.71	□□□□□ -1.66
RTT109	YLL002W	TNA1	P53322	534 aa		4.71	□□□□□ -1.66
RTT109	YLL002W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
RTT109	YLL002W	PRO1	P32264	428 aa		4.7	□□□□□ -1.66
RTT109	YLL002W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
RTT109	YLL002W	POL12	P38121	705 aa	Predicted RBP	4.7	□□□□□ -1.66
RTT109	YLL002W	UBP5	P39944	805 aa		4.7	□□□□□ -1.66
RTT109	YLL002W	SPF1	P39986	1215 aa	Known RBP	4.7	□□□□□ -1.66
RTT109	YLL002W	YJL049W	P47048	450 aa		4.7	□□□□□ -1.66
RTT109	YLL002W	NAN1	Q02931	896 aa	Known RBP	4.7	□□□□□ -1.66
RTT109	YLL002W	HOS3	Q02959	697 aa	Known RBP	4.7	□□□□□ -1.66
RTT109	YLL002W	NBA1	Q08229	501 aa	Known RBP	4.7	□□□□□ -1.66
RTT109	YLL002W	RSB1	Q08417	382 aa		4.7	□□□□□ -1.66
RTT109	YLL002W	TRE1	Q08919	783 aa		4.7	□□□□□ -1.66
RTT109	YLL002W	SSM4	P40318	1319 aa		4.69	□□□□□ -1.66
RTT109	YLL002W	NUP157	P40064	1391 aa	Known RBP	4.69	□□□□□ -1.66
RTT109	YLL002W	YER152C	P10356	443 aa		4.69	□□□□□ -1.66
RTT109	YLL002W	MDL2	P33311	773 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms