RNA–Protein interactions for RNA: YKL190W

CNB1, Transcript of Calcineurin B, yeast

Gene CNB1, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CNB1	YKL190W	VID28	P40547	921 aa		4.88	□□□□□ -1.63
CNB1	YKL190W	PTK2	P47116	818 aa	Known RBP	4.88	□□□□□ -1.63
CNB1	YKL190W	FMS1	P50264	508 aa		4.88	□□□□□ -1.63
CNB1	YKL190W	HDA1	P53973	706 aa		4.88	□□□□□ -1.63
CNB1	YKL190W	MYO5	Q04439	1219 aa	Known RBP	4.88	□□□□□ -1.63
CNB1	YKL190W	YDR341C	Q05506	607 aa	Known RBP	4.88	□□□□□ -1.63
CNB1	YKL190W	UTP13	Q05946	817 aa	Known RBP	4.88	□□□□□ -1.63
CNB1	YKL190W	DUS4	Q06063	367 aa		4.88	□□□□□ -1.63
CNB1	YKL190W	RNR2	P09938	399 aa	Known RBP	4.87	□□□□□ -1.63
CNB1	YKL190W	STE6	P12866	1290 aa		4.87	□□□□□ -1.63
CNB1	YKL190W	RNR3	P21672	869 aa	Known RBP	4.87	□□□□□ -1.63
CNB1	YKL190W	MCR1	P36060	302 aa	Known RBP	4.87	□□□□□ -1.63
CNB1	YKL190W	GPT2	P36148	743 aa		4.87	□□□□□ -1.63
CNB1	YKL190W	OPY1	P38271	328 aa		4.87	□□□□□ -1.63
CNB1	YKL190W	SLX8	P40072	274 aa		4.87	□□□□□ -1.63
CNB1	YKL190W	LIF1	P53150	421 aa		4.87	□□□□□ -1.63
CNB1	YKL190W	CSM3	Q04659	317 aa		4.87	□□□□□ -1.63
CNB1	YKL190W	SPH1	Q06160	661 aa		4.87	□□□□□ -1.63
CNB1	YKL190W	DSE3	Q08729	430 aa		4.87	□□□□□ -1.63
CNB1	YKL190W	YOR111W	Q99210	232 aa		4.87	□□□□□ -1.63
CNB1	YKL190W	ENO1	P00924	437 aa	Known RBP	4.86	□□□□□ -1.63
CNB1	YKL190W	TFC4	P33339	1025 aa		4.86	□□□□□ -1.63
CNB1	YKL190W	SHP1	P34223	423 aa		4.86	□□□□□ -1.63
CNB1	YKL190W	REG2	P38232	338 aa		4.86	□□□□□ -1.63
CNB1	YKL190W	AKR1	P39010	764 aa		4.86	□□□□□ -1.63
CNB1	YKL190W	RPL34B	P40525	121 aa	Known RBP	4.86	□□□□□ -1.63
CNB1	YKL190W	BUD6	P41697	788 aa		4.86	□□□□□ -1.63
CNB1	YKL190W	AAD14	P42884	376 aa		4.86	□□□□□ -1.63
CNB1	YKL190W	BRE5	P53741	515 aa	Known RBP	4.86	□□□□□ -1.63
CNB1	YKL190W	BNI5	P53890	448 aa	Known RBP	4.86	□□□□□ -1.63
CNB1	YKL190W	GDE1	Q02979	1223 aa		4.86	□□□□□ -1.63
CNB1	YKL190W	ISU1	Q03020	165 aa		4.86	□□□□□ -1.63
CNB1	YKL190W	TMA64	Q04600	565 aa	Known RBP	4.86	□□□□□ -1.63
CNB1	YKL190W	DFG5	Q05031	458 aa		4.86	□□□□□ -1.63
CNB1	YKL190W	DUS3	Q06053	668 aa	Known RBP	4.86	□□□□□ -1.63
CNB1	YKL190W	SMD2	Q06217	110 aa	Known RBP	4.86	□□□□□ -1.63
CNB1	YKL190W	SUE1	Q06524	206 aa		4.86	□□□□□ -1.63
CNB1	YKL190W	SUT2	Q12286	268 aa		4.86	□□□□□ -1.63
CNB1	YKL190W	TKL1	P23254	680 aa	Known RBP	4.85	□□□□□ -1.63
CNB1	YKL190W	TIM23	P32897	222 aa		4.85	□□□□□ -1.63
CNB1	YKL190W	TGL1	P34163	548 aa		4.85	□□□□□ -1.63
CNB1	YKL190W	BMH2	P34730	273 aa	Known RBP	4.85	□□□□□ -1.63
CNB1	YKL190W	UIP5	P36137	443 aa		4.85	□□□□□ -1.63
CNB1	YKL190W	CCT3	P39077	534 aa	Known RBP	4.85	□□□□□ -1.63
CNB1	YKL190W	ATG3	P40344	310 aa		4.85	□□□□□ -1.63
CNB1	YKL190W	EPL1	P43572	832 aa		4.85	□□□□□ -1.63
CNB1	YKL190W	GUD1	Q07729	489 aa		4.85	□□□□□ -1.63
CNB1	YKL190W	PSK2	Q08217	1101 aa		4.85	□□□□□ -1.63
CNB1	YKL190W	OXR1	Q08952	273 aa		4.85	□□□□□ -1.63
CNB1	YKL190W	ERP3	Q12403	225 aa		4.85	□□□□□ -1.63
CNB1	YKL190W	NBL1	Q3E7Y6	73 aa		4.85	□□□□□ -1.63
CNB1	YKL190W	MET6	P05694	767 aa	Known RBP	4.84	□□□□□ -1.63
CNB1	YKL190W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
CNB1	YKL190W	SRP54	P20424	541 aa	Known RBP	4.84	□□□□□ -1.63
CNB1	YKL190W	MET22	P32179	357 aa		4.84	□□□□□ -1.63
CNB1	YKL190W	PEP12	P32854	288 aa		4.84	□□□□□ -1.63
CNB1	YKL190W	RXT2	P38255	430 aa		4.84	□□□□□ -1.63
CNB1	YKL190W	YFL040W	P43562	540 aa		4.84	□□□□□ -1.63
CNB1	YKL190W	NUP85	P46673	744 aa		4.84	□□□□□ -1.63
CNB1	YKL190W	ENT3	P47160	408 aa		4.84	□□□□□ -1.63
CNB1	YKL190W	UBP15	P50101	1230 aa		4.84	□□□□□ -1.63
CNB1	YKL190W	ASE1	P50275	885 aa		4.84	□□□□□ -1.63
CNB1	YKL190W	GIS4	Q04233	774 aa		4.84	□□□□□ -1.63
CNB1	YKL190W	ISR1	Q06098	443 aa	Known RBP	4.84	□□□□□ -1.63
CNB1	YKL190W	ISA1	Q07821	250 aa	Predicted RBP	4.84	□□□□□ -1.63
CNB1	YKL190W	YLL058W	Q12198	575 aa		4.84	□□□□□ -1.63
CNB1	YKL190W	CEX1	Q12453	761 aa		4.84	□□□□□ -1.63
CNB1	YKL190W	TRM11	Q12463	433 aa		4.84	□□□□□ -1.63
CNB1	YKL190W	HSP82	P02829	709 aa	Known RBP	4.83	□□□□□ -1.64
CNB1	YKL190W	SPT2	P06843	333 aa	Predicted RBP	4.83	□□□□□ -1.64
CNB1	YKL190W	MATALPHA2	P0CY08	210 aa		4.83	□□□□□ -1.64
CNB1	YKL190W	HMLALPHA2	P0CY09	210 aa		4.83	□□□□□ -1.64
CNB1	YKL190W	SRO9	P25567	434 aa	Known RBP	4.83	□□□□□ -1.64
CNB1	YKL190W	SUL1	P38359	859 aa		4.83	□□□□□ -1.64
CNB1	YKL190W	SOH1	P38633	127 aa		4.83	□□□□□ -1.64
CNB1	YKL190W	KSP1	P38691	1029 aa	Known RBP	4.83	□□□□□ -1.64
CNB1	YKL190W	YHL017W	P38745	532 aa		4.83	□□□□□ -1.64
CNB1	YKL190W	NDT80	P38830	627 aa		4.83	□□□□□ -1.64
CNB1	YKL190W	RPN10	P38886	268 aa	Known RBP	4.83	□□□□□ -1.64
CNB1	YKL190W	NOC2	P39744	710 aa	Known RBP	4.83	□□□□□ -1.64
CNB1	YKL190W	AIM9	P40053	627 aa	Known RBP	4.83	□□□□□ -1.64
CNB1	YKL190W	AIM21	P40563	679 aa		4.83	□□□□□ -1.64
CNB1	YKL190W	SKP2	P42843	763 aa		4.83	□□□□□ -1.64
CNB1	YKL190W	CNM67	P53865	581 aa	Known RBP	4.83	□□□□□ -1.64
CNB1	YKL190W	FMP30	Q02883	468 aa		4.83	□□□□□ -1.64
CNB1	YKL190W	YPL034W	Q03083	165 aa		4.83	□□□□□ -1.64
CNB1	YKL190W	MDM20	Q12387	796 aa	Known RBP	4.83	□□□□□ -1.64
CNB1	YKL190W	RTP1	Q12751	981 aa		4.83	□□□□□ -1.64
CNB1	YKL190W	YDR461C-A	Q2V2P7	80 aa		4.83	□□□□□ -1.64
CNB1	YKL190W	TRL1	P09880	827 aa	Known RBP	4.82	□□□□□ -1.64
CNB1	YKL190W	RPL19A	P0CX82	189 aa	Known RBP	4.82	□□□□□ -1.64
CNB1	YKL190W	RPL19B	P0CX83	189 aa	Predicted RBP	4.82	□□□□□ -1.64
CNB1	YKL190W	POX1	P13711	748 aa		4.82	□□□□□ -1.64
CNB1	YKL190W	SNA3	P14359	133 aa		4.82	□□□□□ -1.64
CNB1	YKL190W	SWI4	P25302	1093 aa	Known RBP	4.82	□□□□□ -1.64
CNB1	YKL190W	KTR2	P33550	425 aa		4.82	□□□□□ -1.64
CNB1	YKL190W	WHI3	P34761	661 aa	Known RBP	4.82	□□□□□ -1.64
CNB1	YKL190W	TTI1	P36097	1038 aa		4.82	□□□□□ -1.64
CNB1	YKL190W	ISW1	P38144	1129 aa		4.82	□□□□□ -1.64
CNB1	YKL190W	PAN5	P38787	379 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms