RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W DUS3Q06053 668 aaKnown RBP6.97□□□□□ -1.29
SPC42YKL042W GIC2Q06648 383 aa6.97□□□□□ -1.29
SPC42YKL042W RPL11AP0C0W9 174 aaKnown RBP6.96□□□□□ -1.3
SPC42YKL042W TOP3P13099 656 aa6.96□□□□□ -1.3
SPC42YKL042W SFP1P32432 683 aa6.96□□□□□ -1.3
SPC42YKL042W GDH3P39708 457 aa6.96□□□□□ -1.3
SPC42YKL042W GPB2P39717 880 aa6.96□□□□□ -1.3
SPC42YKL042W GEM1P39722 662 aa6.96□□□□□ -1.3
SPC42YKL042W HRK1Q08732 759 aaKnown RBP6.96□□□□□ -1.3
SPC42YKL042W RPL11BQ3E757 174 aaPredicted RBP6.96□□□□□ -1.3
SPC42YKL042W ADR1P07248 1323 aa6.96□□□□□ -1.3
SPC42YKL042W SMY2P32909 740 aaKnown RBP6.95□□□□□ -1.3
SPC42YKL042W TOM20P35180 183 aa6.95□□□□□ -1.3
SPC42YKL042W IRC24P40580 263 aa6.95□□□□□ -1.3
SPC42YKL042W TRP3P00937 484 aa6.94□□□□□ -1.3
SPC42YKL042W DBP2P24783 546 aaKnown RBP6.94□□□□□ -1.3
SPC42YKL042W COQ2P32378 372 aa6.94□□□□□ -1.3
SPC42YKL042W DOM34P33309 386 aa6.94□□□□□ -1.3
SPC42YKL042W PEX6P33760 1030 aa6.94□□□□□ -1.3
SPC42YKL042W GPT2P36148 743 aa6.94□□□□□ -1.3
SPC42YKL042W UBP12P39538 1254 aa6.94□□□□□ -1.3
SPC42YKL042W UBP6P43593 499 aaKnown RBP6.94□□□□□ -1.3
SPC42YKL042W MAL11P53048 616 aa6.94□□□□□ -1.3
SPC42YKL042W NCE103P53615 221 aa6.94□□□□□ -1.3
SPC42YKL042W YPR071WQ12346 211 aa6.94□□□□□ -1.3
SPC42YKL042W MSD1P15179 658 aaKnown RBP6.93□□□□□ -1.3
SPC42YKL042W RPL8AP17076 256 aaKnown RBP6.93□□□□□ -1.3
SPC42YKL042W KAE1P36132 386 aa6.93□□□□□ -1.3
SPC42YKL042W PET10P36139 283 aa6.93□□□□□ -1.3
SPC42YKL042W NMD3P38861 518 aaKnown RBP6.93□□□□□ -1.3
SPC42YKL042W SIT1P39980 628 aa6.93□□□□□ -1.3
SPC42YKL042W RPN3P40016 523 aaKnown RBP6.93□□□□□ -1.3
SPC42YKL042W MXR1P40029 184 aa6.93□□□□□ -1.3
SPC42YKL042W YJL045WP47052 634 aa6.93□□□□□ -1.3
SPC42YKL042W SRP1Q02821 542 aaKnown RBP6.93□□□□□ -1.3
SPC42YKL042W TFB2Q02939 513 aa6.93□□□□□ -1.3
SPC42YKL042W TY1A-NL1Q12391 440 aaKnown RBP6.93□□□□□ -1.3
SPC42YKL042W ADE8P04161 214 aa6.92□□□□□ -1.3
SPC42YKL042W RSC6P25632 483 aa6.92□□□□□ -1.3
SPC42YKL042W YKR073CP36153 106 aa6.92□□□□□ -1.3
SPC42YKL042W YEN1P40028 759 aa6.92□□□□□ -1.3
SPC42YKL042W MED7Q08278 222 aa6.92□□□□□ -1.3
SPC42YKL042W YLR122CQ12312 125 aa6.92□□□□□ -1.3
SPC42YKL042W ZDS1P50111 915 aaKnown RBP6.91□□□□□ -1.3
SPC42YKL042W ACM1Q08981 209 aa6.91□□□□□ -1.3
SPC42YKL042W YRO2P38079 344 aa6.9□□□□□ -1.3
SPC42YKL042W DSS1P39112 969 aa6.9□□□□□ -1.3
SPC42YKL042W YNR029CP53729 429 aaKnown RBP6.9□□□□□ -1.3
SPC42YKL042W TPP1Q03796 238 aa6.9□□□□□ -1.3
SPC42YKL042W LCD1Q04377 747 aa6.9□□□□□ -1.3
SPC42YKL042W GSY1P23337 708 aa6.89□□□□□ -1.31
SPC42YKL042W PRO1P32264 428 aa6.89□□□□□ -1.31
SPC42YKL042W CDC12P32468 407 aaKnown RBP6.89□□□□□ -1.31
SPC42YKL042W SAH1P39954 449 aaKnown RBP6.89□□□□□ -1.31
SPC42YKL042W ALG2P43636 503 aa6.89□□□□□ -1.31
SPC42YKL042W AVT1P47082 602 aa6.89□□□□□ -1.31
SPC42YKL042W HLJ1P48353 224 aa6.89□□□□□ -1.31
SPC42YKL042W ALT1P52893 592 aa6.89□□□□□ -1.31
SPC42YKL042W HOS3Q02959 697 aaKnown RBP6.89□□□□□ -1.31
SPC42YKL042W PUS7Q08647 676 aaKnown RBP6.89□□□□□ -1.31
SPC42YKL042W MDM12Q92328 271 aa6.89□□□□□ -1.31
SPC42YKL042W RPS4AP0CX35 261 aaKnown RBP6.88□□□□□ -1.31
SPC42YKL042W RPS4BP0CX36 261 aaKnown RBP6.88□□□□□ -1.31
SPC42YKL042W RAD53P22216 821 aa6.88□□□□□ -1.31
SPC42YKL042W MEF1P25039 761 aa6.88□□□□□ -1.31
SPC42YKL042W YSC84P32793 468 aa6.88□□□□□ -1.31
SPC42YKL042W SLA2P33338 968 aa6.88□□□□□ -1.31
SPC42YKL042W UGA2P38067 497 aa6.88□□□□□ -1.31
SPC42YKL042W YJR008WP47085 338 aa6.88□□□□□ -1.31
SPC42YKL042W TNA1P53322 534 aa6.88□□□□□ -1.31
SPC42YKL042W ATG13Q06628 738 aa6.88□□□□□ -1.31
SPC42YKL042W PHR1P05066 565 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
SPC42YKL042W HRQ1Q05549 1077 aa6.87□□□□□ -1.31
SPC42YKL042W COQ4O13525 335 aa6.86□□□□□ -1.31
SPC42YKL042W THS1P04801 734 aaKnown RBP6.86□□□□□ -1.31
SPC42YKL042W SAF1P38352 637 aa6.86□□□□□ -1.31
SPC42YKL042W TOK1P40310 691 aa6.86□□□□□ -1.31
SPC42YKL042W YFL054CP43549 646 aa6.86□□□□□ -1.31
SPC42YKL042W BUL2Q03758 920 aaKnown RBP6.86□□□□□ -1.31
SPC42YKL042W CHS2P14180 963 aa6.85□□□□□ -1.31
SPC42YKL042W VBA3P25594 458 aa6.85□□□□□ -1.31
SPC42YKL042W NAM7P30771 971 aaKnown RBP6.85□□□□□ -1.31
SPC42YKL042W LIP5P32875 414 aa6.85□□□□□ -1.31
SPC42YKL042W AFR1P33304 620 aa6.85□□□□□ -1.31
SPC42YKL042W ERT1P38140 529 aa6.85□□□□□ -1.31
SPC42YKL042W CTH1P47976 325 aa6.85□□□□□ -1.31
SPC42YKL042W YNL193WP53870 558 aa6.85□□□□□ -1.31
SPC42YKL042W NUP145P49687 1317 aa6.84□□□□□ -1.31
SPC42YKL042W PUB1P32588 453 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
SPC42YKL042W REC104P33323 182 aa6.84□□□□□ -1.31
SPC42YKL042W YKL151CP36059 337 aa6.84□□□□□ -1.31
SPC42YKL042W TOS1P38288 455 aa6.84□□□□□ -1.31
SPC42YKL042W CCM1P48237 864 aaPredicted RBP6.84□□□□□ -1.31
SPC42YKL042W YGR130CP53278 816 aa6.84□□□□□ -1.31
SPC42YKL042W EAR1Q03212 550 aa6.84□□□□□ -1.31
SPC42YKL042W SNF5P18480 905 aa6.83□□□□□ -1.32
SPC42YKL042W NPP1P25353 742 aa6.83□□□□□ -1.32
SPC42YKL042W CCZ1P38273 704 aa6.83□□□□□ -1.32
SPC42YKL042W PMT3P47190 753 aa6.83□□□□□ -1.32
SPC42YKL042W YGR237CP50089 785 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms