RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NMD5	YJR132W	UBA2	P52488	636 aa		7.22	□□□□□ -1.25
NMD5	YJR132W	GCR2	Q01722	534 aa		7.22	□□□□□ -1.25
NMD5	YJR132W	ULP1	Q02724	621 aa		7.22	□□□□□ -1.25
NMD5	YJR132W	AAD16	Q02895	342 aa		7.22	□□□□□ -1.25
NMD5	YJR132W	UTP14	Q04500	899 aa	Known RBP	7.22	□□□□□ -1.25
NMD5	YJR132W	NYV1	Q12255	253 aa		7.22	□□□□□ -1.25
NMD5	YJR132W	FUS1	P11710	512 aa		7.22	□□□□□ -1.25
NMD5	YJR132W	BMH1	P29311	267 aa	Known RBP	7.22	□□□□□ -1.25
NMD5	YJR132W	PHB1	P40961	287 aa		7.22	□□□□□ -1.25
NMD5	YJR132W	DIB1	Q06819	143 aa	Predicted RBP	7.22	□□□□□ -1.25
NMD5	YJR132W	RSC58	Q07979	502 aa		7.22	□□□□□ -1.25
NMD5	YJR132W	REX3	Q12090	404 aa		7.22	□□□□□ -1.25
NMD5	YJR132W	SMC6	Q12749	1114 aa		7.22	□□□□□ -1.25
NMD5	YJR132W	TIF1	P10081	395 aa	Known RBP	7.21	□□□□□ -1.25
NMD5	YJR132W	STI1	P15705	589 aa	Known RBP RIP-Chip data	7.21	□□□□□ -1.25	not detected
NMD5	YJR132W	RPC31	P17890	251 aa		7.21	□□□□□ -1.25
NMD5	YJR132W	NAM7	P30771	971 aa	Known RBP	7.21	□□□□□ -1.25
NMD5	YJR132W	TFC4	P33339	1025 aa		7.21	□□□□□ -1.25
NMD5	YJR132W	YKR018C	P36114	725 aa		7.21	□□□□□ -1.25
NMD5	YJR132W	BOI1	P38041	980 aa	Known RBP	7.21	□□□□□ -1.25
NMD5	YJR132W	ROK1	P45818	564 aa	Predicted RBP	7.21	□□□□□ -1.25
NMD5	YJR132W	RRN5	Q02983	363 aa		7.21	□□□□□ -1.25
NMD5	YJR132W	RRP17	Q04031	235 aa	Predicted RBP	7.21	□□□□□ -1.25
NMD5	YJR132W	SGD1	Q06132	899 aa		7.21	□□□□□ -1.25
NMD5	YJR132W	LSO2	Q3E772	92 aa	Known RBP	7.21	□□□□□ -1.25
NMD5	YJR132W	KSS1	P14681	368 aa		7.21	□□□□□ -1.26
NMD5	YJR132W	YKL023W	P36103	277 aa	Known RBP	7.21	□□□□□ -1.26
NMD5	YJR132W	YDL124W	Q07551	312 aa	Known RBP	7.21	□□□□□ -1.26
NMD5	YJR132W	NOT5	Q12514	560 aa	Predicted RBP	7.21	□□□□□ -1.26
NMD5	YJR132W	JIP3	O13555	125 aa		7.21	□□□□□ -1.26
NMD5	YJR132W	VPS3	P23643	1011 aa		7.21	□□□□□ -1.26
NMD5	YJR132W	STE13	P33894	931 aa		7.21	□□□□□ -1.26
NMD5	YJR132W	TRZ1	P36159	838 aa	Predicted RBP	7.21	□□□□□ -1.26
NMD5	YJR132W	LCD1	Q04377	747 aa		7.21	□□□□□ -1.26
NMD5	YJR132W	MMS1	Q06211	1407 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	STF1	P01098	86 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	HSP60	P19882	572 aa	Known RBP	7.2	□□□□□ -1.26
NMD5	YJR132W	UBC6	P33296	250 aa	Predicted RBP	7.2	□□□□□ -1.26
NMD5	YJR132W	SLA2	P33338	968 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	MRP8	P35719	219 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	TMA108	P40462	946 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	PKP1	P40530	394 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	INA22	P40576	216 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	SBE2	P42223	864 aa	Known RBP	7.2	□□□□□ -1.26
NMD5	YJR132W	APS3	P47064	194 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	YJR107W	P47145	328 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	YLR271W	Q06152	274 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	PHO92	Q06390	306 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	PIN2	Q12057	282 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	YBL113C	Q7M4S9	792 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	STE3	P06783	470 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	SRB4	P32569	687 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	DUR3	P33413	735 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	MOT2	P34909	587 aa	Known RBP	7.2	□□□□□ -1.26
NMD5	YJR132W	CUE2	P36075	443 aa	Known RBP	7.2	□□□□□ -1.26
NMD5	YJR132W	ZIM17	P42844	174 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	YFL066C	P43538	392 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	RPM2	Q02773	1202 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	INP2	Q03824	705 aa		7.2	□□□□□ -1.26
NMD5	YJR132W	TMA7	Q3E764	64 aa	Known RBP	7.2	□□□□□ -1.26
NMD5	YJR132W	TRX1	P22217	103 aa	Known RBP	7.19	□□□□□ -1.26
NMD5	YJR132W	VPH2	P32341	215 aa		7.19	□□□□□ -1.26
NMD5	YJR132W	ALG3	P38179	458 aa		7.19	□□□□□ -1.26
NMD5	YJR132W	UBP15	P50101	1230 aa		7.19	□□□□□ -1.26
NMD5	YJR132W	UFO1	Q04511	668 aa		7.19	□□□□□ -1.26
NMD5	YJR132W	MED1	Q12321	566 aa		7.19	□□□□□ -1.26
NMD5	YJR132W	PWP1	P21304	576 aa	Known RBP	7.19	□□□□□ -1.26
NMD5	YJR132W	SPT8	P38915	602 aa		7.19	□□□□□ -1.26
NMD5	YJR132W	VPS8	P39702	1274 aa		7.19	□□□□□ -1.26
NMD5	YJR132W	RLP7	P40693	322 aa	Known RBP	7.19	□□□□□ -1.26
NMD5	YJR132W	EPL1	P43572	832 aa		7.19	□□□□□ -1.26
NMD5	YJR132W	BNA6	P43619	295 aa		7.19	□□□□□ -1.26
NMD5	YJR132W	UBX4	P54730	416 aa		7.19	□□□□□ -1.26
NMD5	YJR132W	ACF2	Q12168	779 aa		7.19	□□□□□ -1.26
NMD5	YJR132W	FRT1	Q99332	602 aa		7.19	□□□□□ -1.26
NMD5	YJR132W	GCD1	P09032	578 aa	Predicted RBP	7.18	□□□□□ -1.26
NMD5	YJR132W	SFL1	P20134	766 aa		7.18	□□□□□ -1.26
NMD5	YJR132W	LRP1	P38801	184 aa	Known RBP	7.18	□□□□□ -1.26
NMD5	YJR132W	YJR120W	P47157	116 aa		7.18	□□□□□ -1.26
NMD5	YJR132W	LYS4	P49367	693 aa	Predicted RBP	7.18	□□□□□ -1.26
NMD5	YJR132W	YGR266W	P53326	701 aa		7.18	□□□□□ -1.26
NMD5	YJR132W	REH1	Q06709	432 aa		7.18	□□□□□ -1.26
NMD5	YJR132W	NOP6	Q07623	225 aa	Known RBP	7.18	□□□□□ -1.26
NMD5	YJR132W	NOT3	P06102	836 aa	Known RBP	7.18	□□□□□ -1.26
NMD5	YJR132W	SRM1	P21827	482 aa		7.18	□□□□□ -1.26
NMD5	YJR132W	REI1	P38344	393 aa	Predicted RBP	7.18	□□□□□ -1.26
NMD5	YJR132W	TIF4631	P39935	952 aa	Known RBP	7.18	□□□□□ -1.26
NMD5	YJR132W	PSY2	P40164	858 aa		7.18	□□□□□ -1.26
NMD5	YJR132W	NEO1	P40527	1151 aa		7.18	□□□□□ -1.26
NMD5	YJR132W	GPP1	P41277	250 aa	Known RBP	7.18	□□□□□ -1.26
NMD5	YJR132W	GPD2	P41911	440 aa	Known RBP	7.18	□□□□□ -1.26
NMD5	YJR132W	BUD7	Q08754	746 aa		7.18	□□□□□ -1.26
NMD5	YJR132W	CIT1	P00890	479 aa		7.18	□□□□□ -1.26
NMD5	YJR132W	CTT1	P06115	562 aa		7.18	□□□□□ -1.26
NMD5	YJR132W	HIS3	P06633	220 aa		7.18	□□□□□ -1.26
NMD5	YJR132W	SEC14	P24280	304 aa	Known RBP	7.18	□□□□□ -1.26
NMD5	YJR132W	PUP1	P25043	261 aa		7.18	□□□□□ -1.26
NMD5	YJR132W	LCB1	P25045	558 aa	Known RBP	7.18	□□□□□ -1.26
NMD5	YJR132W	YER156C	P40093	338 aa	Known RBP	7.18	□□□□□ -1.26
NMD5	YJR132W	EMP47	P43555	445 aa		7.18	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms