RNA–Protein interactions for RNA: YHL035C

VMR1, Transcript of Vacuolar membrane protein, yeast

Gene VMR1, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMR1	YHL035C	HBN1	Q96VH4	193 aa		2.61	□□□□□ -1.99
VMR1	YHL035C	EMC3	P36039	253 aa		2.61	□□□□□ -1.99
VMR1	YHL035C	SEC26	P41810	973 aa	Known RBP	2.61	□□□□□ -1.99
VMR1	YHL035C	DAM1	P53267	343 aa		2.61	□□□□□ -1.99
VMR1	YHL035C	YGR125W	P53273	1036 aa		2.61	□□□□□ -1.99
VMR1	YHL035C	ELA1	P53861	379 aa	Predicted RBP	2.61	□□□□□ -1.99
VMR1	YHL035C	RSC58	Q07979	502 aa		2.61	□□□□□ -1.99
VMR1	YHL035C	ACE2	P21192	770 aa		2.61	□□□□□ -1.99
VMR1	YHL035C	YHL012W	P38709	493 aa		2.61	□□□□□ -1.99
VMR1	YHL035C	OYE3	P41816	400 aa	Predicted RBP	2.61	□□□□□ -1.99
VMR1	YHL035C	YJL045W	P47052	634 aa		2.61	□□□□□ -1.99
VMR1	YHL035C	YNR014W	P53719	212 aa		2.61	□□□□□ -1.99
VMR1	YHL035C	YLR225C	Q05948	407 aa	Known RBP	2.61	□□□□□ -1.99
VMR1	YHL035C	TDA6	Q06466	467 aa		2.61	□□□□□ -1.99
VMR1	YHL035C	NSI1	Q12457	570 aa		2.61	□□□□□ -1.99
VMR1	YHL035C	AFR1	P33304	620 aa		2.6	□□□□□ -1.99
VMR1	YHL035C	GDH3	P39708	457 aa		2.6	□□□□□ -1.99
VMR1	YHL035C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
VMR1	YHL035C	MDM38	Q08179	573 aa		2.6	□□□□□ -1.99
VMR1	YHL035C	NOP14	Q99207	810 aa	Known RBP	2.6	□□□□□ -1.99
VMR1	YHL035C	YCK2	P23292	546 aa	Known RBP	2.6	□□□□□ -1.99
VMR1	YHL035C	MRC1	P25588	1096 aa		2.6	□□□□□ -1.99
VMR1	YHL035C	GSY1	P23337	708 aa		2.6	□□□□□ -1.99
VMR1	YHL035C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
VMR1	YHL035C	GAR1	P28007	205 aa	Known RBP	2.6	□□□□□ -1.99
VMR1	YHL035C	DOM34	P33309	386 aa		2.6	□□□□□ -1.99
VMR1	YHL035C	YKL151C	P36059	337 aa		2.6	□□□□□ -1.99
VMR1	YHL035C	YMR187C	Q03236	431 aa		2.6	□□□□□ -1.99
VMR1	YHL035C	MET6	P05694	767 aa	Known RBP	2.59	□□□□□ -1.99
VMR1	YHL035C	PRO1	P32264	428 aa		2.59	□□□□□ -1.99
VMR1	YHL035C	MCM7	P38132	845 aa		2.59	□□□□□ -1.99
VMR1	YHL035C	RTA1	P53047	317 aa		2.59	□□□□□ -1.99
VMR1	YHL035C	YPL034W	Q03083	165 aa		2.59	□□□□□ -1.99
VMR1	YHL035C	TPP1	Q03796	238 aa		2.59	□□□□□ -1.99
VMR1	YHL035C	REH1	Q06709	432 aa		2.59	□□□□□ -1.99
VMR1	YHL035C	CDC48	P25694	835 aa	Known RBP	2.59	□□□□□ -1.99
VMR1	YHL035C	BET3	P36149	193 aa		2.59	□□□□□ -1.99
VMR1	YHL035C	TSL1	P38427	1098 aa	Known RBP	2.59	□□□□□ -1.99
VMR1	YHL035C	SBE2	P42223	864 aa	Known RBP	2.59	□□□□□ -1.99
VMR1	YHL035C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
VMR1	YHL035C	FBP1	P09201	348 aa		2.59	□□□□□ -2
VMR1	YHL035C	PRI2	P20457	528 aa		2.59	□□□□□ -2
VMR1	YHL035C	DBP2	P24783	546 aa	Known RBP	2.59	□□□□□ -2
VMR1	YHL035C	ENP1	P38333	483 aa	Known RBP	2.59	□□□□□ -2
VMR1	YHL035C	NMD3	P38861	518 aa	Known RBP	2.59	□□□□□ -2
VMR1	YHL035C	CCC2	P38995	1004 aa		2.59	□□□□□ -2
VMR1	YHL035C	MGS1	P40151	587 aa		2.59	□□□□□ -2
VMR1	YHL035C	ALR2	P43553	858 aa		2.59	□□□□□ -2
VMR1	YHL035C	CAF16	P43569	289 aa		2.59	□□□□□ -2
VMR1	YHL035C	ALG2	P43636	503 aa		2.59	□□□□□ -2
VMR1	YHL035C	YGR283C	P53336	341 aa	Predicted RBP	2.59	□□□□□ -2
VMR1	YHL035C	ALG6	Q12001	544 aa	Known RBP	2.59	□□□□□ -2
VMR1	YHL035C	ARE1	P25628	610 aa		2.58	□□□□□ -2
VMR1	YHL035C	PEX6	P33760	1030 aa		2.58	□□□□□ -2
VMR1	YHL035C	MTC2	P34246	357 aa		2.58	□□□□□ -2
VMR1	YHL035C	KAE1	P36132	386 aa		2.58	□□□□□ -2
VMR1	YHL035C	GIC1	P38785	314 aa		2.58	□□□□□ -2
VMR1	YHL035C	YAP1801	P38856	637 aa		2.58	□□□□□ -2
VMR1	YHL035C	NSG2	P53898	299 aa		2.58	□□□□□ -2
VMR1	YHL035C	RCM1	P53972	490 aa		2.58	□□□□□ -2
VMR1	YHL035C	SRT1	Q03175	343 aa		2.58	□□□□□ -2
VMR1	YHL035C	YLR001C	Q07895	862 aa		2.58	□□□□□ -2
VMR1	YHL035C	PUS1	Q12211	544 aa	Known RBP	2.58	□□□□□ -2
VMR1	YHL035C	YLR122C	Q12312	125 aa		2.58	□□□□□ -2
VMR1	YHL035C	REC104	P33323	182 aa		2.58	□□□□□ -2
VMR1	YHL035C	UBP12	P39538	1254 aa		2.58	□□□□□ -2
VMR1	YHL035C	MSC2	Q03455	724 aa		2.58	□□□□□ -2
VMR1	YHL035C	TRE1	Q08919	783 aa		2.58	□□□□□ -2
VMR1	YHL035C	TIM23	P32897	222 aa		2.58	□□□□□ -2
VMR1	YHL035C	SPC29	P33419	253 aa		2.58	□□□□□ -2
VMR1	YHL035C	MBP1	P39678	833 aa		2.58	□□□□□ -2
VMR1	YHL035C	HRQ1	Q05549	1077 aa		2.58	□□□□□ -2
VMR1	YHL035C	ESC2	Q06340	456 aa		2.58	□□□□□ -2
VMR1	YHL035C	CHS2	P14180	963 aa		2.58	□□□□□ -2
VMR1	YHL035C	DUS3	Q06053	668 aa	Known RBP	2.58	□□□□□ -2
VMR1	YHL035C	KIN2	P13186	1147 aa	Known RBP	2.57	□□□□□ -2
VMR1	YHL035C	PPG1	P32838	368 aa		2.57	□□□□□ -2
VMR1	YHL035C	TAT1	P38085	619 aa		2.57	□□□□□ -2
VMR1	YHL035C	MNN1	P39106	762 aa		2.57	□□□□□ -2
VMR1	YHL035C	YER158C	P40095	573 aa		2.57	□□□□□ -2
VMR1	YHL035C	PMT3	P47190	753 aa		2.57	□□□□□ -2
VMR1	YHL035C	ENV7	Q12003	364 aa		2.57	□□□□□ -2
VMR1	YHL035C	YGR161W-C	Q3E744	92 aa		2.57	□□□□□ -2
VMR1	YHL035C	MPH2	P0CD99	609 aa		2.57	□□□□□ -2
VMR1	YHL035C	AAR2	P32357	355 aa	Predicted RBP	2.57	□□□□□ -2
VMR1	YHL035C	COQ2	P32378	372 aa		2.57	□□□□□ -2
VMR1	YHL035C	NOG2	P53742	486 aa	Known RBP	2.57	□□□□□ -2
VMR1	YHL035C	NTG2	Q08214	380 aa		2.57	□□□□□ -2
VMR1	YHL035C	ECM21	P38167	1117 aa	Known RBP	2.57	□□□□□ -2
VMR1	YHL035C	URM1	P40554	99 aa	Predicted RBP	2.57	□□□□□ -2
VMR1	YHL035C	CCT8	P47079	568 aa	Known RBP	2.57	□□□□□ -2
VMR1	YHL035C	THI72	Q08579	599 aa		2.57	□□□□□ -2
VMR1	YHL035C	DED1	P06634	604 aa	Known RBP	2.57	□□□□□ -2
VMR1	YHL035C	MSD1	P15179	658 aa	Known RBP	2.57	□□□□□ -2
VMR1	YHL035C	GRX4	P32642	244 aa		2.57	□□□□□ -2
VMR1	YHL035C	NIT3	P49954	291 aa		2.57	□□□□□ -2
VMR1	YHL035C	BI4	P03879	638 aa		2.56	□□□□□ -2
VMR1	YHL035C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
VMR1	YHL035C	STO1	P34160	861 aa	Known RBP	2.56	□□□□□ -2
VMR1	YHL035C	TOK1	P40310	691 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms