RNA–Protein interactions for RNA: YGR104C

SRB5, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB5, Length 924 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB5YGR104C GCR1P07261 785 aa5.29□□□□□ -1.56
SRB5YGR104C MLS1P30952 554 aa5.29□□□□□ -1.56
SRB5YGR104C NMD2P38798 1089 aaKnown RBP5.29□□□□□ -1.56
SRB5YGR104C AIM21P40563 679 aa5.29□□□□□ -1.56
SRB5YGR104C SIZ1Q04195 904 aa5.29□□□□□ -1.56
SRB5YGR104C RXT3Q07458 294 aa5.29□□□□□ -1.56
SRB5YGR104C SVS1Q12254 260 aa5.29□□□□□ -1.56
SRB5YGR104C YER152CP10356 443 aa5.28□□□□□ -1.56
SRB5YGR104C STE11P23561 717 aa5.28□□□□□ -1.56
SRB5YGR104C MPT5P39016 859 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
SRB5YGR104C RRT14P40470 206 aa5.28□□□□□ -1.56
SRB5YGR104C MPH1P40562 993 aa5.28□□□□□ -1.56
SRB5YGR104C DUS4Q06063 367 aa5.28□□□□□ -1.56
SRB5YGR104C RPP2AP05319 106 aaKnown RBP5.27□□□□□ -1.57
SRB5YGR104C GAL11P19659 1081 aa5.27□□□□□ -1.57
SRB5YGR104C CTS1P29029 562 aa5.27□□□□□ -1.57
SRB5YGR104C TOM20P35180 183 aa5.27□□□□□ -1.57
SRB5YGR104C ABZ1P37254 787 aaPredicted RBP5.27□□□□□ -1.57
SRB5YGR104C SHM2P37291 469 aaKnown RBP5.27□□□□□ -1.57
SRB5YGR104C GEM1P39722 662 aa5.27□□□□□ -1.57
SRB5YGR104C SNF7P39929 240 aaKnown RBP5.27□□□□□ -1.57
SRB5YGR104C TUB2P02557 457 aaKnown RBP5.26□□□□□ -1.57
SRB5YGR104C CMP2P14747 604 aa5.26□□□□□ -1.57
SRB5YGR104C BAS1P22035 811 aa5.26□□□□□ -1.57
SRB5YGR104C RRP15Q06511 250 aaPredicted RBP5.26□□□□□ -1.57
SRB5YGR104C ACK1Q07622 623 aaPredicted RBP5.26□□□□□ -1.57
SRB5YGR104C ACM1Q08981 209 aa5.26□□□□□ -1.57
SRB5YGR104C ATE1P16639 503 aa5.25□□□□□ -1.57
SRB5YGR104C APL1P27351 700 aa5.25□□□□□ -1.57
SRB5YGR104C RER2P35196 286 aa5.25□□□□□ -1.57
SRB5YGR104C TLG1Q03322 224 aa5.25□□□□□ -1.57
SRB5YGR104C ROT1Q03691 256 aa5.25□□□□□ -1.57
SRB5YGR104C GIR2Q03768 265 aaPredicted RBP5.25□□□□□ -1.57
SRB5YGR104C GPB1Q08886 897 aa5.25□□□□□ -1.57
SRB5YGR104C GAL10P04397 699 aa5.24□□□□□ -1.57
SRB5YGR104C DAL5P15365 543 aa5.24□□□□□ -1.57
SRB5YGR104C MCM2P29469 868 aa5.24□□□□□ -1.57
SRB5YGR104C PEP7P32609 515 aa5.24□□□□□ -1.57
SRB5YGR104C FPR3P38911 411 aaKnown RBP5.24□□□□□ -1.57
SRB5YGR104C PMC1P38929 1173 aaPredicted RBP5.24□□□□□ -1.57
SRB5YGR104C TIF35Q04067 274 aaKnown RBP5.24□□□□□ -1.57
SRB5YGR104C SPR28Q04921 423 aa5.24□□□□□ -1.57
SRB5YGR104C ACE2P21192 770 aa5.23□□□□□ -1.57
SRB5YGR104C CDC20P26309 610 aa5.23□□□□□ -1.57
SRB5YGR104C UGA2P38067 497 aa5.23□□□□□ -1.57
SRB5YGR104C MCM7P38132 845 aa5.23□□□□□ -1.57
SRB5YGR104C FYV10P40492 516 aa5.23□□□□□ -1.57
SRB5YGR104C MNN10P50108 393 aaKnown RBP5.23□□□□□ -1.57
SRB5YGR104C MSC2Q03455 724 aa5.23□□□□□ -1.57
SRB5YGR104C PLB2Q03674 706 aa5.23□□□□□ -1.57
SRB5YGR104C RPL11AP0C0W9 174 aaKnown RBP5.22□□□□□ -1.57
SRB5YGR104C RPA135P22138 1203 aaKnown RBP5.22□□□□□ -1.57
SRB5YGR104C LYP1P32487 611 aa5.22□□□□□ -1.57
SRB5YGR104C TRM2P33753 639 aa5.22□□□□□ -1.57
SRB5YGR104C MNR2P35724 969 aa5.22□□□□□ -1.57
SRB5YGR104C MPE1P35728 441 aaKnown RBP5.22□□□□□ -1.57
SRB5YGR104C GIS1Q03833 894 aa5.22□□□□□ -1.57
SRB5YGR104C RPL11BQ3E757 174 aaPredicted RBP5.22□□□□□ -1.57
SRB5YGR104C SRM1P21827 482 aa5.21□□□□□ -1.58
SRB5YGR104C TPM2P40414 161 aa5.21□□□□□ -1.58
SRB5YGR104C NNF1P47149 201 aa5.21□□□□□ -1.58
SRB5YGR104C VPS62P53285 467 aa5.21□□□□□ -1.58
SRB5YGR104C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
SRB5YGR104C SPP382Q06411 708 aaPredicted RBP5.21□□□□□ -1.58
SRB5YGR104C YDL121CQ07541 149 aa5.21□□□□□ -1.58
SRB5YGR104C NOP12Q08208 459 aaKnown RBP5.21□□□□□ -1.58
SRB5YGR104C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
SRB5YGR104C RIB2Q12362 591 aaKnown RBP5.21□□□□□ -1.58
SRB5YGR104C PNS1Q12412 539 aa5.21□□□□□ -1.58
SRB5YGR104C RKM4Q12504 494 aa5.21□□□□□ -1.58
SRB5YGR104C CDC6P09119 513 aa5.2□□□□□ -1.58
SRB5YGR104C PNT1P38969 423 aa5.2□□□□□ -1.58
SRB5YGR104C HOS4P40480 1083 aa5.2□□□□□ -1.58
SRB5YGR104C YFL054CP43549 646 aa5.2□□□□□ -1.58
SRB5YGR104C CDC34P14682 295 aa5.19□□□□□ -1.58
SRB5YGR104C SLA2P33338 968 aa5.19□□□□□ -1.58
SRB5YGR104C PET112P33893 541 aa5.19□□□□□ -1.58
SRB5YGR104C ERP2P39704 215 aa5.19□□□□□ -1.58
SRB5YGR104C IOC3P43596 787 aa5.19□□□□□ -1.58
SRB5YGR104C RNH70P53331 553 aa5.19□□□□□ -1.58
SRB5YGR104C TMA64Q04600 565 aaKnown RBP5.19□□□□□ -1.58
SRB5YGR104C YLL058WQ12198 575 aa5.19□□□□□ -1.58
SRB5YGR104C TRP2P00899 507 aaKnown RBP5.18□□□□□ -1.58
SRB5YGR104C HCM1P25364 564 aa5.18□□□□□ -1.58
SRB5YGR104C MFT1P33441 392 aaKnown RBP5.18□□□□□ -1.58
SRB5YGR104C MXR1P40029 184 aa5.18□□□□□ -1.58
SRB5YGR104C VPS27P40343 622 aaKnown RBP5.18□□□□□ -1.58
SRB5YGR104C TYW3P53177 273 aa5.18□□□□□ -1.58
SRB5YGR104C SPO20Q04359 397 aa5.18□□□□□ -1.58
SRB5YGR104C HMI1Q12039 706 aa5.18□□□□□ -1.58
SRB5YGR104C BI4P03879 638 aa5.17□□□□□ -1.58
SRB5YGR104C TSR4P25040 408 aa5.17□□□□□ -1.58
SRB5YGR104C PMI40P29952 429 aaKnown RBP5.17□□□□□ -1.58
SRB5YGR104C LST4P34239 828 aa5.17□□□□□ -1.58
SRB5YGR104C RRP14P36080 434 aaKnown RBP5.17□□□□□ -1.58
SRB5YGR104C NOC2P39744 710 aaKnown RBP5.17□□□□□ -1.58
SRB5YGR104C NOP2P40991 618 aaKnown RBP5.17□□□□□ -1.58
SRB5YGR104C MCM6P53091 1017 aaKnown RBP5.17□□□□□ -1.58
SRB5YGR104C MEH1Q02205 184 aa5.17□□□□□ -1.58
SRB5YGR104C YLR224WQ05947 369 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms