RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	AIM26	P32858	118 aa		4.09	□□□□□ -1.75
ECO1	YFR027W	YKL107W	P34251	309 aa		4.09	□□□□□ -1.75
ECO1	YFR027W	MOT2	P34909	587 aa	Known RBP	4.09	□□□□□ -1.75
ECO1	YFR027W	PAF1	P38351	445 aa		4.09	□□□□□ -1.75
ECO1	YFR027W	PNT1	P38969	423 aa		4.09	□□□□□ -1.75
ECO1	YFR027W	YFL054C	P43549	646 aa		4.09	□□□□□ -1.75
ECO1	YFR027W	PRP43	P53131	767 aa	Known RBP	4.09	□□□□□ -1.75
ECO1	YFR027W	NOP7	P53261	605 aa	Known RBP	4.09	□□□□□ -1.75
ECO1	YFR027W	CWC24	P53769	259 aa		4.09	□□□□□ -1.75
ECO1	YFR027W	TOP2	P06786	1428 aa	Known RBP	4.08	□□□□□ -1.76
ECO1	YFR027W	RPL11A	P0C0W9	174 aa	Known RBP	4.08	□□□□□ -1.76
ECO1	YFR027W	SBA1	P28707	216 aa	Known RBP	4.08	□□□□□ -1.76
ECO1	YFR027W	SIP5	P40210	489 aa	Known RBP	4.08	□□□□□ -1.76
ECO1	YFR027W	FOL2	P51601	243 aa	Known RBP	4.08	□□□□□ -1.76
ECO1	YFR027W	ALD6	P54115	500 aa	Known RBP	4.08	□□□□□ -1.76
ECO1	YFR027W	YLR225C	Q05948	407 aa	Known RBP	4.08	□□□□□ -1.76
ECO1	YFR027W	ATG13	Q06628	738 aa		4.08	□□□□□ -1.76
ECO1	YFR027W	OPI10	Q08202	246 aa		4.08	□□□□□ -1.76
ECO1	YFR027W	ACM1	Q08981	209 aa		4.08	□□□□□ -1.76
ECO1	YFR027W	YDL177C	Q12257	170 aa		4.08	□□□□□ -1.76
ECO1	YFR027W	RPL11B	Q3E757	174 aa	Predicted RBP	4.08	□□□□□ -1.76
ECO1	YFR027W	PEP1	P32319	1579 aa		4.07	□□□□□ -1.76
ECO1	YFR027W	TRM732	Q03496	1420 aa		4.07	□□□□□ -1.76
ECO1	YFR027W	SPS1	P08458	490 aa		4.07	□□□□□ -1.76
ECO1	YFR027W	BAS1	P22035	811 aa		4.07	□□□□□ -1.76
ECO1	YFR027W	DBP2	P24783	546 aa	Known RBP	4.07	□□□□□ -1.76
ECO1	YFR027W	SLA2	P33338	968 aa		4.07	□□□□□ -1.76
ECO1	YFR027W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
ECO1	YFR027W	THI80	P35202	319 aa		4.07	□□□□□ -1.76
ECO1	YFR027W	GEM1	P39722	662 aa		4.07	□□□□□ -1.76
ECO1	YFR027W	VAC8	P39968	578 aa		4.07	□□□□□ -1.76
ECO1	YFR027W	MXR1	P40029	184 aa		4.07	□□□□□ -1.76
ECO1	YFR027W	SEC26	P41810	973 aa	Known RBP	4.07	□□□□□ -1.76
ECO1	YFR027W	YGL176C	P46945	554 aa		4.07	□□□□□ -1.76
ECO1	YFR027W	PIL1	P53252	339 aa	Known RBP	4.07	□□□□□ -1.76
ECO1	YFR027W	ESC2	Q06340	456 aa		4.07	□□□□□ -1.76
ECO1	YFR027W	SPP382	Q06411	708 aa	Predicted RBP	4.07	□□□□□ -1.76
ECO1	YFR027W	RSB1	Q08417	382 aa		4.07	□□□□□ -1.76
ECO1	YFR027W	FAL1	Q12099	399 aa	Known RBP	4.07	□□□□□ -1.76
ECO1	YFR027W	SRB8	P25648	1427 aa		4.06	□□□□□ -1.76
ECO1	YFR027W	ABD1	P32783	436 aa	Predicted RBP	4.06	□□□□□ -1.76
ECO1	YFR027W	ABZ1	P37254	787 aa	Predicted RBP	4.06	□□□□□ -1.76
ECO1	YFR027W	GIP4	P39732	760 aa		4.06	□□□□□ -1.76
ECO1	YFR027W	SHE9	Q04172	456 aa		4.06	□□□□□ -1.76
ECO1	YFR027W	NOP58	Q12499	511 aa	Known RBP	4.06	□□□□□ -1.76
ECO1	YFR027W	BUD4	P47136	1447 aa		4.05	□□□□□ -1.76
ECO1	YFR027W	THS1	P04801	734 aa	Known RBP	4.05	□□□□□ -1.76
ECO1	YFR027W	ROX1	P25042	368 aa		4.05	□□□□□ -1.76
ECO1	YFR027W	YKL069W	P36088	180 aa		4.05	□□□□□ -1.76
ECO1	YFR027W	UGA2	P38067	497 aa		4.05	□□□□□ -1.76
ECO1	YFR027W	RRT14	P40470	206 aa		4.05	□□□□□ -1.76
ECO1	YFR027W	SMC3	P47037	1230 aa		4.05	□□□□□ -1.76
ECO1	YFR027W	VPS4	P52917	437 aa		4.05	□□□□□ -1.76
ECO1	YFR027W	GIS1	Q03833	894 aa		4.05	□□□□□ -1.76
ECO1	YFR027W	YLR419W	Q06698	1435 aa	Known RBP	4.04	□□□□□ -1.76
ECO1	YFR027W	MON2	P48563	1636 aa	Predicted RBP	4.04	□□□□□ -1.76
ECO1	YFR027W	ETP1	P38748	585 aa	Known RBP	4.04	□□□□□ -1.76
ECO1	YFR027W	SPF1	P39986	1215 aa	Known RBP	4.04	□□□□□ -1.76
ECO1	YFR027W	YIR014W	P40570	242 aa		4.04	□□□□□ -1.76
ECO1	YFR027W	SNO2	P53823	222 aa		4.04	□□□□□ -1.76
ECO1	YFR027W	MRPL22	P53881	309 aa		4.04	□□□□□ -1.76
ECO1	YFR027W	SSF2	Q12153	453 aa	Predicted RBP	4.04	□□□□□ -1.76
ECO1	YFR027W	SVS1	Q12254	260 aa		4.04	□□□□□ -1.76
ECO1	YFR027W	BI4	P03879	638 aa		4.03	□□□□□ -1.76
ECO1	YFR027W	PRI2	P20457	528 aa		4.03	□□□□□ -1.76
ECO1	YFR027W	ACE2	P21192	770 aa		4.03	□□□□□ -1.76
ECO1	YFR027W	VBA5	P36172	582 aa		4.03	□□□□□ -1.76
ECO1	YFR027W	RFC5	P38251	354 aa		4.03	□□□□□ -1.76
ECO1	YFR027W	CHZ1	P40019	153 aa	Predicted RBP	4.03	□□□□□ -1.76
ECO1	YFR027W	SIZ1	Q04195	904 aa		4.03	□□□□□ -1.76
ECO1	YFR027W	YLL058W	Q12198	575 aa		4.03	□□□□□ -1.76
ECO1	YFR027W	RIB2	Q12362	591 aa	Known RBP	4.03	□□□□□ -1.76
ECO1	YFR027W	MMS1	Q06211	1407 aa		4.03	□□□□□ -1.76
ECO1	YFR027W	MRP8	P35719	219 aa		4.02	□□□□□ -1.77
ECO1	YFR027W	MTC3	P53077	123 aa		4.02	□□□□□ -1.77
ECO1	YFR027W	RSM24	Q03976	319 aa		4.02	□□□□□ -1.77
ECO1	YFR027W	TDA5	Q06417	326 aa	Known RBP	4.02	□□□□□ -1.77
ECO1	YFR027W	EDE1	P34216	1381 aa		4.02	□□□□□ -1.77
ECO1	YFR027W	CFT1	Q06632	1357 aa	Known RBP	4.02	□□□□□ -1.77
ECO1	YFR027W	NUP170	P38181	1502 aa		4.01	□□□□□ -1.77
ECO1	YFR027W	KIN2	P13186	1147 aa	Known RBP	4.01	□□□□□ -1.77
ECO1	YFR027W	RPS0A	P32905	252 aa	Known RBP	4.01	□□□□□ -1.77
ECO1	YFR027W	YKL151C	P36059	337 aa		4.01	□□□□□ -1.77
ECO1	YFR027W	BYE1	P36106	594 aa		4.01	□□□□□ -1.77
ECO1	YFR027W	FLR1	P38124	548 aa		4.01	□□□□□ -1.77
ECO1	YFR027W	PBY1	P38254	753 aa		4.01	□□□□□ -1.77
ECO1	YFR027W	MBP1	P39678	833 aa		4.01	□□□□□ -1.77
ECO1	YFR027W	IRR1	P40541	1150 aa		4.01	□□□□□ -1.77
ECO1	YFR027W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
ECO1	YFR027W	TAN1	P53072	289 aa	Predicted RBP	4.01	□□□□□ -1.77
ECO1	YFR027W	YDR132C	Q03900	495 aa		4.01	□□□□□ -1.77
ECO1	YFR027W	IOC4	Q04213	475 aa		4.01	□□□□□ -1.77
ECO1	YFR027W	CYC1	P00044	109 aa	Predicted RBP	4	□□□□□ -1.77
ECO1	YFR027W	SOD2	P00447	233 aa		4	□□□□□ -1.77
ECO1	YFR027W	NOT3	P06102	836 aa	Known RBP	4	□□□□□ -1.77
ECO1	YFR027W	PRP6	P19735	899 aa	Predicted RBP	4	□□□□□ -1.77
ECO1	YFR027W	TAT2	P38967	592 aa		4	□□□□□ -1.77
ECO1	YFR027W	HFM1	P51979	1187 aa		4	□□□□□ -1.77
ECO1	YFR027W	RIM8	P53179	542 aa		4	□□□□□ -1.77
ECO1	YFR027W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms