RNA–Protein interactions for RNA: YEL013W

VAC8, Transcript of Phosphorylated and palmitoylated vacuolar membrane protein, yeast

Gene VAC8, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC8	YEL013W	NAP1	P25293	417 aa	Known RBP	4.24	□□□□□ -1.73
VAC8	YEL013W	NFS1	P25374	497 aa		4.24	□□□□□ -1.73
VAC8	YEL013W	HSE1	P38753	452 aa		4.24	□□□□□ -1.73
VAC8	YEL013W	PRP43	P53131	767 aa	Known RBP	4.24	□□□□□ -1.73
VAC8	YEL013W	EST2	Q06163	884 aa		4.24	□□□□□ -1.73
VAC8	YEL013W	ESF1	Q06344	628 aa	Known RBP	4.24	□□□□□ -1.73
VAC8	YEL013W	DED1	P06634	604 aa	Known RBP	4.24	□□□□□ -1.73
VAC8	YEL013W	HEM13	P11353	328 aa	Known RBP	4.24	□□□□□ -1.73
VAC8	YEL013W	MSB1	P21339	1137 aa	Known RBP	4.24	□□□□□ -1.73
VAC8	YEL013W	SMY2	P32909	740 aa	Known RBP	4.24	□□□□□ -1.73
VAC8	YEL013W	RDH54	P38086	958 aa		4.24	□□□□□ -1.73
VAC8	YEL013W	MED7	Q08278	222 aa		4.24	□□□□□ -1.73
VAC8	YEL013W	CYC7	P00045	113 aa		4.23	□□□□□ -1.73
VAC8	YEL013W	TRP3	P00937	484 aa		4.23	□□□□□ -1.73
VAC8	YEL013W	SEC23	P15303	768 aa	Known RBP	4.23	□□□□□ -1.73
VAC8	YEL013W	RET1	P22276	1149 aa	Known RBP	4.23	□□□□□ -1.73
VAC8	YEL013W	WHI3	P34761	661 aa	Known RBP	4.23	□□□□□ -1.73
VAC8	YEL013W	CIT3	P43635	486 aa		4.23	□□□□□ -1.73
VAC8	YEL013W	MRL1	Q06815	381 aa		4.23	□□□□□ -1.73
VAC8	YEL013W	YOR059C	Q08448	450 aa	Known RBP	4.23	□□□□□ -1.73
VAC8	YEL013W	BUG1	Q12191	341 aa		4.23	□□□□□ -1.73
VAC8	YEL013W	NSI1	Q12457	570 aa		4.23	□□□□□ -1.73
VAC8	YEL013W	YLL066C	Q99208	1374 aa		4.22	□□□□□ -1.73
VAC8	YEL013W	GCR1	P07261	785 aa		4.22	□□□□□ -1.73
VAC8	YEL013W	OMA1	P36163	345 aa		4.22	□□□□□ -1.73
VAC8	YEL013W	ENP1	P38333	483 aa	Known RBP	4.22	□□□□□ -1.73
VAC8	YEL013W	ALT1	P52893	592 aa		4.22	□□□□□ -1.73
VAC8	YEL013W	RMD1	Q03441	430 aa		4.22	□□□□□ -1.73
VAC8	YEL013W	HDA2	Q06629	674 aa		4.22	□□□□□ -1.73
VAC8	YEL013W	TAF13	P11747	167 aa		4.21	□□□□□ -1.73
VAC8	YEL013W	RAD4	P14736	754 aa		4.21	□□□□□ -1.73
VAC8	YEL013W	SNU71	P53207	620 aa	Known RBP	4.21	□□□□□ -1.73
VAC8	YEL013W	NYV1	Q12255	253 aa		4.21	□□□□□ -1.73
VAC8	YEL013W	YPR117W	Q06116	2489 aa		4.21	□□□□□ -1.74
VAC8	YEL013W	YLR278C	Q05854	1341 aa		4.21	□□□□□ -1.74
VAC8	YEL013W	RAD27	P26793	382 aa		4.21	□□□□□ -1.74
VAC8	YEL013W	PET112	P33893	541 aa		4.21	□□□□□ -1.74
VAC8	YEL013W	NMD3	P38861	518 aa	Known RBP	4.21	□□□□□ -1.74
VAC8	YEL013W	CHZ1	P40019	153 aa	Predicted RBP	4.21	□□□□□ -1.74
VAC8	YEL013W	EAR1	Q03212	550 aa		4.21	□□□□□ -1.74
VAC8	YEL013W	RKM2	Q03942	479 aa		4.21	□□□□□ -1.74
VAC8	YEL013W	YLR257W	Q06146	321 aa	Known RBP	4.21	□□□□□ -1.74
VAC8	YEL013W	APC1	P53886	1748 aa		4.2	□□□□□ -1.74
VAC8	YEL013W	RPS9B	P05755	195 aa	Known RBP	4.2	□□□□□ -1.74
VAC8	YEL013W	PAF1	P38351	445 aa		4.2	□□□□□ -1.74
VAC8	YEL013W	VPS53	P47061	822 aa		4.2	□□□□□ -1.74
VAC8	YEL013W	TAF8	Q03750	510 aa		4.2	□□□□□ -1.74
VAC8	YEL013W	TPP1	Q03796	238 aa		4.2	□□□□□ -1.74
VAC8	YEL013W	YLR419W	Q06698	1435 aa	Known RBP	4.19	□□□□□ -1.74
VAC8	YEL013W	YKR073C	P36153	106 aa		4.19	□□□□□ -1.74
VAC8	YEL013W	QNS1	P38795	714 aa	Known RBP	4.19	□□□□□ -1.74
VAC8	YEL013W	RSA3	Q05942	220 aa	Known RBP	4.19	□□□□□ -1.74
VAC8	YEL013W	PUS7	Q08647	676 aa	Known RBP	4.19	□□□□□ -1.74
VAC8	YEL013W	YVC1	Q12324	675 aa		4.19	□□□□□ -1.74
VAC8	YEL013W	PTC5	Q12511	572 aa		4.19	□□□□□ -1.74
VAC8	YEL013W	LIP5	P32875	414 aa		4.18	□□□□□ -1.74
VAC8	YEL013W	SIW14	P53965	281 aa		4.18	□□□□□ -1.74
VAC8	YEL013W	ROD1	Q02805	837 aa		4.18	□□□□□ -1.74
VAC8	YEL013W	RTT10	Q08924	1013 aa		4.18	□□□□□ -1.74
VAC8	YEL013W	RRT14	P40470	206 aa		4.18	□□□□□ -1.74
VAC8	YEL013W	INP52	P50942	1183 aa		4.18	□□□□□ -1.74
VAC8	YEL013W	JIP5	Q06214	492 aa	Predicted RBP	4.18	□□□□□ -1.74
VAC8	YEL013W	TRE1	Q08919	783 aa		4.18	□□□□□ -1.74
VAC8	YEL013W	TMA46	Q12000	345 aa	Known RBP	4.18	□□□□□ -1.74
VAC8	YEL013W	IKI3	Q06706	1349 aa	Known RBP	4.17	□□□□□ -1.74
VAC8	YEL013W	GCD1	P09032	578 aa	Predicted RBP	4.17	□□□□□ -1.74
VAC8	YEL013W	MKK2	P32491	506 aa		4.17	□□□□□ -1.74
VAC8	YEL013W	MNR2	P35724	969 aa		4.17	□□□□□ -1.74
VAC8	YEL013W	ALG3	P38179	458 aa		4.17	□□□□□ -1.74
VAC8	YEL013W	RAT1	Q02792	1006 aa	Known RBP	4.17	□□□□□ -1.74
VAC8	YEL013W	HRK1	Q08732	759 aa	Known RBP	4.17	□□□□□ -1.74
VAC8	YEL013W	THS1	P04801	734 aa	Known RBP	4.16	□□□□□ -1.74
VAC8	YEL013W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	RIP-Chip
VAC8	YEL013W	AFG2	P32794	780 aa		4.16	□□□□□ -1.74
VAC8	YEL013W	MAD1	P40957	749 aa		4.16	□□□□□ -1.74
VAC8	YEL013W	OYE3	P41816	400 aa	Predicted RBP	4.16	□□□□□ -1.74
VAC8	YEL013W	ENT3	P47160	408 aa		4.16	□□□□□ -1.74
VAC8	YEL013W	ADE16	P54113	591 aa	Known RBP	4.16	□□□□□ -1.74
VAC8	YEL013W	SDH1	Q00711	640 aa		4.16	□□□□□ -1.74
VAC8	YEL013W	SVF1	Q05515	481 aa		4.16	□□□□□ -1.74
VAC8	YEL013W	BRE4	Q07660	1125 aa		4.16	□□□□□ -1.74
VAC8	YEL013W	RPO41	P13433	1351 aa	Known RBP	4.16	□□□□□ -1.74
VAC8	YEL013W	SYP1	P25623	870 aa	Known RBP	4.15	□□□□□ -1.74
VAC8	YEL013W	KIP1	P28742	1111 aa		4.15	□□□□□ -1.74
VAC8	YEL013W	YJL045W	P47052	634 aa		4.15	□□□□□ -1.74
VAC8	YEL013W	RIX7	Q07844	837 aa	Known RBP	4.15	□□□□□ -1.74
VAC8	YEL013W	SSM4	P40318	1319 aa		4.15	□□□□□ -1.74
VAC8	YEL013W	YIL177C	P40434	1758 aa		4.15	□□□□□ -1.74
VAC8	YEL013W	YJL225C	P40889	1758 aa		4.15	□□□□□ -1.74
VAC8	YEL013W	SIR4	P11978	1358 aa		4.15	□□□□□ -1.75
VAC8	YEL013W	CDC34	P14682	295 aa		4.15	□□□□□ -1.75
VAC8	YEL013W	ADP1	P25371	1049 aa		4.15	□□□□□ -1.75
VAC8	YEL013W	PRO1	P32264	428 aa		4.15	□□□□□ -1.75
VAC8	YEL013W	RER2	P35196	286 aa		4.15	□□□□□ -1.75
VAC8	YEL013W	HXT13	P39924	564 aa		4.15	□□□□□ -1.75
VAC8	YEL013W	YIL089W	P40500	205 aa		4.15	□□□□□ -1.75
VAC8	YEL013W	GNP1	P48813	663 aa		4.15	□□□□□ -1.75
VAC8	YEL013W	HXT17	P53631	564 aa		4.15	□□□□□ -1.75
VAC8	YEL013W	CWC24	P53769	259 aa		4.15	□□□□□ -1.75
VAC8	YEL013W	HXT15	P54854	567 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms