RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeastyeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP4YDR354W NOP7P53261 605 aaKnown RBP6.78□□□□□ -1.32
TRP4YDR354W ACE2P21192 770 aa6.77□□□□□ -1.33
TRP4YDR354W SNF7P39929 240 aaKnown RBP6.77□□□□□ -1.33
TRP4YDR354W KRI1P42846 591 aaKnown RBP6.77□□□□□ -1.33
TRP4YDR354W ROT1Q03691 256 aa6.77□□□□□ -1.33
TRP4YDR354W YOR352WQ08816 343 aa6.77□□□□□ -1.33
TRP4YDR354W GAL10P04397 699 aa6.76□□□□□ -1.33
TRP4YDR354W KIN2P13186 1147 aaKnown RBP6.76□□□□□ -1.33
TRP4YDR354W SRM1P21827 482 aa6.76□□□□□ -1.33
TRP4YDR354W YKL151CP36059 337 aa6.76□□□□□ -1.33
TRP4YDR354W HFM1P51979 1187 aa6.76□□□□□ -1.33
TRP4YDR354W PLB2Q03674 706 aa6.76□□□□□ -1.33
TRP4YDR354W HRQ1Q05549 1077 aa6.76□□□□□ -1.33
TRP4YDR354W SGD1Q06132 899 aa6.76□□□□□ -1.33
TRP4YDR354W YPL277CQ08989 487 aa6.76□□□□□ -1.33
TRP4YDR354W THS1P04801 734 aaKnown RBP6.75□□□□□ -1.33
TRP4YDR354W THI80P35202 319 aa6.75□□□□□ -1.33
TRP4YDR354W LAM1P38851 1228 aa6.75□□□□□ -1.33
TRP4YDR354W MTC3P53077 123 aa6.75□□□□□ -1.33
TRP4YDR354W SHE9Q04172 456 aa6.75□□□□□ -1.33
TRP4YDR354W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
TRP4YDR354W RPS13P05756 151 aaKnown RBP6.74□□□□□ -1.33
TRP4YDR354W PRP6P19735 899 aaPredicted RBP6.74□□□□□ -1.33
TRP4YDR354W SPF1P39986 1215 aaKnown RBP6.74□□□□□ -1.33
TRP4YDR354W RRT14P40470 206 aa6.74□□□□□ -1.33
TRP4YDR354W RIM8P53179 542 aa6.74□□□□□ -1.33
TRP4YDR354W TDA5Q06417 326 aaKnown RBP6.74□□□□□ -1.33
TRP4YDR354W SAH1P39954 449 aaKnown RBP6.73□□□□□ -1.33
TRP4YDR354W XYL2Q07993 356 aa6.73□□□□□ -1.33
TRP4YDR354W SOD2P00447 233 aa6.72□□□□□ -1.33
TRP4YDR354W STE5P32917 917 aa6.72□□□□□ -1.33
TRP4YDR354W TOD6P34219 525 aa6.72□□□□□ -1.33
TRP4YDR354W MEF2P39677 819 aa6.72□□□□□ -1.33
TRP4YDR354W YDR132CQ03900 495 aa6.72□□□□□ -1.33
TRP4YDR354W WRS1Q12109 432 aaKnown RBP6.72□□□□□ -1.33
TRP4YDR354W SSF2Q12153 453 aaPredicted RBP6.72□□□□□ -1.33
TRP4YDR354W GCN5Q03330 439 aa6.71□□□□□ -1.34
TRP4YDR354W SIZ1Q04195 904 aa6.71□□□□□ -1.34
TRP4YDR354W MDM38Q08179 573 aa6.71□□□□□ -1.34
TRP4YDR354W GRX1P25373 110 aaKnown RBP6.7□□□□□ -1.34
TRP4YDR354W MRP8P35719 219 aa6.7□□□□□ -1.34
TRP4YDR354W SPT20P50875 604 aa6.7□□□□□ -1.34
TRP4YDR354W MSC2Q03455 724 aa6.7□□□□□ -1.34
TRP4YDR354W DUS3Q06053 668 aaKnown RBP6.7□□□□□ -1.34
TRP4YDR354W YBR184WP38299 523 aa6.69□□□□□ -1.34
TRP4YDR354W GTF1P53260 183 aaPredicted RBP6.69□□□□□ -1.34
TRP4YDR354W YDR306CQ06640 478 aa6.69□□□□□ -1.34
TRP4YDR354W OSW2Q12202 724 aa6.69□□□□□ -1.34
TRP4YDR354W CDC12P32468 407 aaKnown RBP6.68□□□□□ -1.34
TRP4YDR354W PBY1P38254 753 aa6.68□□□□□ -1.34
TRP4YDR354W GIC1P38785 314 aa6.68□□□□□ -1.34
TRP4YDR354W SRP1Q02821 542 aaKnown RBP6.68□□□□□ -1.34
TRP4YDR354W DUS4Q06063 367 aa6.68□□□□□ -1.34
TRP4YDR354W YLL058WQ12198 575 aa6.68□□□□□ -1.34
TRP4YDR354W YAP1801P38856 637 aa6.67□□□□□ -1.34
TRP4YDR354W NPP2P39997 493 aa6.67□□□□□ -1.34
TRP4YDR354W IRR1P40541 1150 aa6.67□□□□□ -1.34
TRP4YDR354W GUS1P46655 708 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
TRP4YDR354W SRT1Q03175 343 aa6.67□□□□□ -1.34
TRP4YDR354W GCV2P49095 1034 aa6.66□□□□□ -1.34
TRP4YDR354W PPH3P32345 308 aa6.65□□□□□ -1.34
TRP4YDR354W FLR1P38124 548 aa6.65□□□□□ -1.34
TRP4YDR354W TAF1P46677 1066 aa6.65□□□□□ -1.34
TRP4YDR354W ESC8Q08119 714 aa6.65□□□□□ -1.34
TRP4YDR354W GPB1Q08886 897 aa6.65□□□□□ -1.34
TRP4YDR354W ENA1P13587 1091 aa6.64□□□□□ -1.35
TRP4YDR354W TAT2P38967 592 aa6.64□□□□□ -1.35
TRP4YDR354W ZRG8P40021 1076 aa6.64□□□□□ -1.35
TRP4YDR354W PBP1P53297 722 aaKnown RBP6.64□□□□□ -1.35
TRP4YDR354W SFB2P53953 876 aa6.64□□□□□ -1.35
TRP4YDR354W ENA2Q01896 1091 aa6.64□□□□□ -1.35
TRP4YDR354W ENA5Q12691 1091 aa6.64□□□□□ -1.35
TRP4YDR354W CDC6P09119 513 aa6.63□□□□□ -1.35
TRP4YDR354W FUN30P31380 1131 aa6.63□□□□□ -1.35
TRP4YDR354W AAR2P32357 355 aaPredicted RBP6.63□□□□□ -1.35
TRP4YDR354W MND2P40577 368 aa6.63□□□□□ -1.35
TRP4YDR354W PFD1P46988 109 aa6.63□□□□□ -1.35
TRP4YDR354W NAN1Q02931 896 aaKnown RBP6.63□□□□□ -1.35
TRP4YDR354W RXT3Q07458 294 aa6.63□□□□□ -1.35
TRP4YDR354W FMP25Q08023 583 aa6.63□□□□□ -1.35
TRP4YDR354W PRE10P21242 288 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
TRP4YDR354W CDC20P26309 610 aa6.62□□□□□ -1.35
TRP4YDR354W SRP101P32916 621 aa6.62□□□□□ -1.35
TRP4YDR354W ECM21P38167 1117 aaKnown RBP6.62□□□□□ -1.35
TRP4YDR354W ACK1Q07622 623 aaPredicted RBP6.62□□□□□ -1.35
TRP4YDR354W RAD4P14736 754 aa6.61□□□□□ -1.35
TRP4YDR354W EMC1P25574 760 aa6.61□□□□□ -1.35
TRP4YDR354W YAP6Q03935 383 aa6.61□□□□□ -1.35
TRP4YDR354W TPO1Q07824 586 aa6.61□□□□□ -1.35
TRP4YDR354W YLR358CO13565 187 aa6.6□□□□□ -1.35
TRP4YDR354W NPP1P25353 742 aa6.6□□□□□ -1.35
TRP4YDR354W YRO2P38079 344 aa6.6□□□□□ -1.35
TRP4YDR354W ALR2P43553 858 aa6.6□□□□□ -1.35
TRP4YDR354W CDA1Q06702 301 aa6.6□□□□□ -1.35
TRP4YDR354W HMI1Q12039 706 aa6.6□□□□□ -1.35
TRP4YDR354W PRP9P19736 530 aaKnown RBP6.59□□□□□ -1.35
TRP4YDR354W RPL8BP29453 256 aaKnown RBP6.59□□□□□ -1.35
TRP4YDR354W HBS1P32769 611 aaKnown RBP6.59□□□□□ -1.35
TRP4YDR354W AFR1P33304 620 aa6.59□□□□□ -1.35
TRP4YDR354W YKL222CP35995 705 aa6.59□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms