RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	HIR1	P32479	840 aa		3.52	□□□□□ -1.85
TFB1	YDR311W	BAP2	P38084	609 aa		3.52	□□□□□ -1.85
TFB1	YDR311W	ALG3	P38179	458 aa		3.52	□□□□□ -1.85
TFB1	YDR311W	YBR071W	P38243	211 aa		3.52	□□□□□ -1.85
TFB1	YDR311W	DAS1	P47005	663 aa		3.52	□□□□□ -1.85
TFB1	YDR311W	HAS1	Q03532	505 aa	Known RBP	3.52	□□□□□ -1.85
TFB1	YDR311W	YDL121C	Q07541	149 aa		3.52	□□□□□ -1.85
TFB1	YDR311W	MCA1	Q08601	432 aa		3.52	□□□□□ -1.85
TFB1	YDR311W	SOG2	Q08817	791 aa		3.52	□□□□□ -1.85
TFB1	YDR311W	TMA7	Q3E764	64 aa	Known RBP	3.52	□□□□□ -1.85
TFB1	YDR311W	CDC9	P04819	755 aa		3.51	□□□□□ -1.85
TFB1	YDR311W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
TFB1	YDR311W	RAD53	P22216	821 aa		3.51	□□□□□ -1.85
TFB1	YDR311W	DOM34	P33309	386 aa		3.51	□□□□□ -1.85
TFB1	YDR311W	ERT1	P38140	529 aa		3.51	□□□□□ -1.85
TFB1	YDR311W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
TFB1	YDR311W	SAH1	P39954	449 aa	Known RBP	3.51	□□□□□ -1.85
TFB1	YDR311W	YIG1	Q08956	461 aa		3.51	□□□□□ -1.85
TFB1	YDR311W	THS1	P04801	734 aa	Known RBP	3.5	□□□□□ -1.85
TFB1	YDR311W	PIF1	P07271	859 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	AAR2	P32357	355 aa	Predicted RBP	3.5	□□□□□ -1.85
TFB1	YDR311W	PET10	P36139	283 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	SNF7	P39929	240 aa	Known RBP	3.5	□□□□□ -1.85
TFB1	YDR311W	MGS1	P40151	587 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	NEO1	P40527	1151 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	SPO74	P45819	413 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	YNL034W	P53963	612 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	YNL018C	P53976	612 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	SVL3	Q03088	825 aa	Known RBP	3.5	□□□□□ -1.85
TFB1	YDR311W	MPD2	Q99316	277 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	SRD1	P09007	221 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	DBP2	P24783	546 aa	Known RBP	3.5	□□□□□ -1.85
TFB1	YDR311W	PCL2	P25693	308 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	TAT1	P38085	619 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.5	□□□□□ -1.85	not detected
TFB1	YDR311W	HNT2	P49775	206 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	PEX14	P53112	341 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	MET13	P53128	600 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	MTQ2	Q03920	221 aa	Predicted RBP	3.5	□□□□□ -1.85
TFB1	YDR311W	GAS5	Q08193	484 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	NYV1	Q12255	253 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	PTC5	Q12511	572 aa		3.5	□□□□□ -1.85
TFB1	YDR311W	TY4B-P	A0A0B7P3V8	1104 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	RAD18	P10862	487 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	PLC1	P32383	869 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	AFR1	P33304	620 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	TFC4	P33339	1025 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	RRM3	P38766	723 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	SIT1	P39980	628 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	ALG2	P43636	503 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	TY4A-J	P47023	414 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	YPL034W	Q03083	165 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	BUL2	Q03758	920 aa	Known RBP	3.49	□□□□□ -1.85
TFB1	YDR311W	RKM2	Q03942	479 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	DUS3	Q06053	668 aa	Known RBP	3.49	□□□□□ -1.85
TFB1	YDR311W	GNT1	Q12096	491 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	SLP1	Q12232	587 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	TY4A-H	Q6Q5P6	413 aa		3.49	□□□□□ -1.85
TFB1	YDR311W	AI3	P03877	415 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	ATP4	P05626	244 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	YER152C	P10356	443 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	YEF3	P16521	1044 aa	Known RBP	3.48	□□□□□ -1.85
TFB1	YDR311W	RPA135	P22138	1203 aa	Known RBP	3.48	□□□□□ -1.85
TFB1	YDR311W	SPC29	P33419	253 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	RGD1	P38339	666 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	GIP2	P40036	548 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	PEA2	P40091	420 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	CEF1	Q03654	590 aa	Predicted RBP	3.48	□□□□□ -1.85
TFB1	YDR311W	ATG16	Q03818	150 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	SPO71	Q03868	1245 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	HFD1	Q04458	532 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	ALG6	Q12001	544 aa	Known RBP	3.48	□□□□□ -1.85
TFB1	YDR311W	RPL11A	P0C0W9	174 aa	Known RBP	3.48	□□□□□ -1.85
TFB1	YDR311W	SFL1	P20134	766 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	GSY1	P23337	708 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	PPH3	P32345	308 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	PNT1	P38969	423 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	MXR1	P40029	184 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	IES5	P40060	125 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	GUP1	P53154	560 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	YGR021W	P53212	290 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	SOK2	P53438	785 aa	Predicted RBP	3.48	□□□□□ -1.85
TFB1	YDR311W	MEC3	Q02574	474 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	SPP382	Q06411	708 aa	Predicted RBP	3.48	□□□□□ -1.85
TFB1	YDR311W	GIN4	Q12263	1142 aa		3.48	□□□□□ -1.85
TFB1	YDR311W	RPL11B	Q3E757	174 aa	Predicted RBP	3.48	□□□□□ -1.85
TFB1	YDR311W	SST2	P11972	698 aa	Known RBP	3.47	□□□□□ -1.85
TFB1	YDR311W	YRO2	P38079	344 aa		3.47	□□□□□ -1.85
TFB1	YDR311W	ATG14	P38270	344 aa		3.47	□□□□□ -1.85
TFB1	YDR311W	REI1	P38344	393 aa	Predicted RBP	3.47	□□□□□ -1.85
TFB1	YDR311W	GYP8	P43570	497 aa		3.47	□□□□□ -1.85
TFB1	YDR311W	YJR096W	P47137	282 aa		3.47	□□□□□ -1.85
TFB1	YDR311W	TRE2	Q08693	809 aa		3.47	□□□□□ -1.85
TFB1	YDR311W	SAC7	P17121	654 aa		3.46	□□□□□ -1.85
TFB1	YDR311W	NPP1	P25353	742 aa		3.46	□□□□□ -1.85
TFB1	YDR311W	NFS1	P25374	497 aa		3.46	□□□□□ -1.85
TFB1	YDR311W	PRP19	P32523	503 aa	Known RBP	3.46	□□□□□ -1.85
TFB1	YDR311W	SFA1	P32771	386 aa		3.46	□□□□□ -1.85
TFB1	YDR311W	MTC2	P34246	357 aa		3.46	□□□□□ -1.85
TFB1	YDR311W	ARL1	P38116	183 aa	Known RBP	3.46	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 90.2 ms