RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261C-DYDR261C-D RSC30P38781 883 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D PCF11P39081 626 aaPredicted RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D NDE1P40215 560 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D TRF5P48561 642 aaKnown RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D CWH41P53008 833 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D NPL3Q01560 414 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
YDR261C-DYDR261C-D CSN9Q03981 162 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D GTB1Q04924 702 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D PWP1P21304 576 aaKnown RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D ATG36P46983 293 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D SSU72P53538 206 aaPredicted RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D YNR068CP53754 272 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D ASI3P53983 676 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D RCO1Q04779 684 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D GAL4P04386 881 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D RAD6P06104 172 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D DPB2P24482 689 aaPredicted RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D ATP11P32453 318 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D TIF4631P39935 952 aaKnown RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D SBE2P42223 864 aaKnown RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D YGL176CP46945 554 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D SPC105P53148 917 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D PLP1Q04004 230 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D RQC1Q05468 723 aaKnown RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D YLR283WQ05867 314 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D COG4Q06096 861 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D VPS74Q06385 345 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D SPP382Q06411 708 aaPredicted RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D OPT2Q06593 877 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D FEX2Q08991 375 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D YOR131CQ12486 218 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D MPD2Q99316 277 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D PRP5P21372 849 aaPredicted RBP4.79□□□□□ -1.64
YDR261C-DYDR261C-D RAD53P22216 821 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D MAP2P38174 421 aaKnown RBP4.79□□□□□ -1.64
YDR261C-DYDR261C-D ERC1P38767 581 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D TMA108P40462 946 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D COX16P47081 118 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D ZDS1P50111 915 aaKnown RBP4.79□□□□□ -1.64
YDR261C-DYDR261C-D ZIP2P53061 704 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D LIF1P53150 421 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D MDM20Q12387 796 aaKnown RBP4.79□□□□□ -1.64
YDR261C-DYDR261C-D MTC2P34246 357 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D GCD10P41814 478 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D APT1P49435 187 aaKnown RBP4.79□□□□□ -1.64
YDR261C-DYDR261C-D GET1P53192 235 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D TRM8Q12009 286 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D DAL5P15365 543 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D DBP5P20449 482 aaKnown RBP4.79□□□□□ -1.64
YDR261C-DYDR261C-D MSP1P28737 362 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D PAP1P29468 568 aaKnown RBP4.79□□□□□ -1.64
YDR261C-DYDR261C-D STO1P34160 861 aaKnown RBP4.79□□□□□ -1.64
YDR261C-DYDR261C-D ECM4P36156 370 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D COX15P40086 486 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D PSR1Q07800 427 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D TLG2Q08144 397 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D PSK2Q08217 1101 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D FEX1Q08913 375 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D RSE1Q04693 1361 aaKnown RBP4.79□□□□□ -1.64
YDR261C-DYDR261C-D CDC34P14682 295 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D CAF4P36130 643 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D SWC5P38326 303 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D NOP16P40007 231 aaKnown RBP4.79□□□□□ -1.64
YDR261C-DYDR261C-D PRM2P40534 656 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D LIA1P47120 325 aaKnown RBP4.79□□□□□ -1.64
YDR261C-DYDR261C-D MMT1Q03218 510 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D RNH1Q04740 348 aa4.79□□□□□ -1.64
YDR261C-DYDR261C-D TYW1Q08960 810 aaKnown RBP4.79□□□□□ -1.64
YDR261C-DYDR261C-D LEU1P07264 779 aaKnown RBP4.78□□□□□ -1.64
YDR261C-DYDR261C-D UBP12P39538 1254 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D MMM1P41800 426 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D HST2P53686 357 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D GPI17Q04080 534 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D SCP160P06105 1222 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
YDR261C-DYDR261C-D PRP40P33203 583 aaKnown RBP4.78□□□□□ -1.64
YDR261C-DYDR261C-D YAP5P40574 245 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D ERV25P54837 211 aaKnown RBP4.78□□□□□ -1.64
YDR261C-DYDR261C-D MFM1Q02783 413 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D TRS130Q03660 1102 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D HDA2Q06629 674 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D ENT1Q12518 454 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D TFC1P32367 649 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D GDH2P33327 1092 aaKnown RBP4.78□□□□□ -1.64
YDR261C-DYDR261C-D YIL166CP40445 542 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D HLJ1P48353 224 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D NSE1Q07913 336 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D PPM2Q08282 695 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D BUD7Q08754 746 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D ATP16Q12165 160 aa4.78□□□□□ -1.64
YDR261C-DYDR261C-D PGA3Q12746 312 aaKnown RBP4.78□□□□□ -1.64
YDR261C-DYDR261C-D CYM1P32898 989 aa4.77□□□□□ -1.65
YDR261C-DYDR261C-D BOI1P38041 980 aaKnown RBP4.77□□□□□ -1.65
YDR261C-DYDR261C-D COS8P38723 381 aa4.77□□□□□ -1.65
YDR261C-DYDR261C-D YHR054CP38780 354 aa4.77□□□□□ -1.65
YDR261C-DYDR261C-D TOK1P40310 691 aa4.77□□□□□ -1.65
YDR261C-DYDR261C-D YIL092WP40497 633 aa4.77□□□□□ -1.65
YDR261C-DYDR261C-D PRM15Q03262 622 aa4.77□□□□□ -1.65
YDR261C-DYDR261C-D PIG1Q06216 648 aa4.77□□□□□ -1.65
YDR261C-DYDR261C-D TYR1P20049 452 aa4.77□□□□□ -1.65
YDR261C-DYDR261C-D OSH3P38713 996 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms