RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	FYV10	P40492	516 aa		3.68	□□□□□ -1.82
PSF1	YDR013W	CEP3	P40969	608 aa		3.68	□□□□□ -1.82
PSF1	YDR013W	SGM1	P47166	707 aa		3.68	□□□□□ -1.82
PSF1	YDR013W	SDA1	P53313	767 aa	Known RBP	3.68	□□□□□ -1.82
PSF1	YDR013W	VPS75	P53853	264 aa		3.68	□□□□□ -1.82
PSF1	YDR013W	RPS15	Q01855	142 aa	Known RBP	3.68	□□□□□ -1.82
PSF1	YDR013W	WAR1	Q03631	944 aa		3.68	□□□□□ -1.82
PSF1	YDR013W	UTP5	Q04177	643 aa	Known RBP	3.68	□□□□□ -1.82
PSF1	YDR013W	YDR341C	Q05506	607 aa	Known RBP	3.68	□□□□□ -1.82
PSF1	YDR013W	YOR296W	Q08748	1289 aa		3.68	□□□□□ -1.82
PSF1	YDR013W	YPL260W	Q08977	551 aa		3.68	□□□□□ -1.82
PSF1	YDR013W	RRP6	Q12149	733 aa	Known RBP	3.68	□□□□□ -1.82
PSF1	YDR013W	GET3	Q12154	354 aa	Known RBP	3.68	□□□□□ -1.82
PSF1	YDR013W	NYV1	Q12255	253 aa		3.68	□□□□□ -1.82
PSF1	YDR013W	HIS4	P00815	799 aa	Known RBP	3.67	□□□□□ -1.82
PSF1	YDR013W	TOP1	P04786	769 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	CBP3	P21560	335 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	CLB1	P24868	471 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	MRC1	P25588	1096 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	DEP1	P31385	405 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	SRB4	P32569	687 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	ANP1	P32629	500 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	RPT3	P33298	428 aa	Known RBP	3.67	□□□□□ -1.82
PSF1	YDR013W	MPE1	P35728	441 aa	Known RBP	3.67	□□□□□ -1.82
PSF1	YDR013W	MRPL16	P38064	232 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	REI1	P38344	393 aa	Predicted RBP	3.67	□□□□□ -1.82
PSF1	YDR013W	RTS1	P38903	757 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	SMC2	P38989	1170 aa	Known RBP	3.67	□□□□□ -1.82
PSF1	YDR013W	UTP7	P40055	554 aa	Known RBP	3.67	□□□□□ -1.82
PSF1	YDR013W	GSM1	P42950	618 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	ALD2	P47771	506 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	UTP22	P53254	1237 aa	Predicted RBP	3.67	□□□□□ -1.82
PSF1	YDR013W	RPT4	P53549	437 aa	Known RBP	3.67	□□□□□ -1.82
PSF1	YDR013W	BNI5	P53890	448 aa	Known RBP	3.67	□□□□□ -1.82
PSF1	YDR013W	GIS4	Q04233	774 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	VPS38	Q05919	439 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	AFT2	Q08957	416 aa		3.67	□□□□□ -1.82
PSF1	YDR013W	RPL22A	P05749	121 aa	Known RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	SWI6	P09959	803 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	RNA1	P11745	407 aa	Known RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	DAT1	P13483	248 aa	Known RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	THR4	P16120	514 aa	Known RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	COQ1	P18900	473 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	RNR3	P21672	869 aa	Known RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	GSY1	P23337	708 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	SWI4	P25302	1093 aa	Known RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	SEC65	P29478	273 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	NIP100	P33420	868 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	STO1	P34160	861 aa	Known RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	SHM1	P37292	490 aa	Predicted RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	GRX7	P38068	203 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	RFT1	P38206	574 aa	Predicted RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	OLA1	P38219	394 aa	Known RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	RXT2	P38255	430 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	SIP3	P38717	1229 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	VID27	P40157	782 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	YFH7	P43591	353 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	HUL5	P53119	910 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	RNT1	Q02555	471 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	TY1A-DR2	Q03964	440 aa	Known RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	SYF1	Q04048	859 aa	Predicted RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	RRB1	Q04225	511 aa	Known RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	TFC6	Q06339	672 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	OMS1	Q06668	471 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	ATG9	Q12142	997 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	RAD59	Q12223	238 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	CLF1	Q12309	687 aa	Predicted RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	OSH2	Q12451	1283 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	NOP14	Q99207	810 aa	Known RBP	3.66	□□□□□ -1.82
PSF1	YDR013W	ADR1	P07248	1323 aa		3.66	□□□□□ -1.82
PSF1	YDR013W	MTF2	P10849	440 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	CAF20	P12962	161 aa	Known RBP	3.65	□□□□□ -1.83
PSF1	YDR013W	MAK31	P23059	88 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	BMH1	P29311	267 aa	Known RBP	3.65	□□□□□ -1.83
PSF1	YDR013W	IRE1	P32361	1115 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	SRP40	P32583	406 aa	Predicted RBP	3.65	□□□□□ -1.83
PSF1	YDR013W	YEL043W	P32618	956 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	BYE1	P36106	594 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	GDT1	P38301	280 aa	Predicted RBP	3.65	□□□□□ -1.83
PSF1	YDR013W	CTM1	P38818	585 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	VPS45	P38932	577 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	APL6	P46682	809 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	LSB1	P53281	241 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	DSE4	P53753	1117 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	IRC4	Q03036	179 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	TRS120	Q04183	1289 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	YLR407W	Q06070	228 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	MMR1	Q06324	491 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	SPP382	Q06411	708 aa	Predicted RBP	3.65	□□□□□ -1.83
PSF1	YDR013W	FRA1	Q07825	749 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	PPM2	Q08282	695 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	YOR111W	Q99210	232 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	LAM4	P38800	1345 aa		3.65	□□□□□ -1.83
PSF1	YDR013W	MET6	P05694	767 aa	Known RBP	3.64	□□□□□ -1.83
PSF1	YDR013W	PET111	P08468	800 aa		3.64	□□□□□ -1.83
PSF1	YDR013W	RPL8A	P17076	256 aa	Known RBP	3.64	□□□□□ -1.83
PSF1	YDR013W	ACE2	P21192	770 aa		3.64	□□□□□ -1.83
PSF1	YDR013W	PSO2	P30620	661 aa		3.64	□□□□□ -1.83
PSF1	YDR013W	NFU1	P32860	256 aa		3.64	□□□□□ -1.83
PSF1	YDR013W	XRS2	P33301	854 aa		3.64	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms