RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W MTC3P53077 123 aa6.38□□□□□ -1.39
SHR3YDL212W PRP43P53131 767 aaKnown RBP6.38□□□□□ -1.39
SHR3YDL212W NOP7P53261 605 aaKnown RBP6.38□□□□□ -1.39
SHR3YDL212W STE5P32917 917 aa6.37□□□□□ -1.39
SHR3YDL212W SHE9Q04172 456 aa6.37□□□□□ -1.39
SHR3YDL212W THI80P35202 319 aa6.36□□□□□ -1.39
SHR3YDL212W SNO2P53823 222 aa6.36□□□□□ -1.39
SHR3YDL212W PLB2Q03674 706 aa6.36□□□□□ -1.39
SHR3YDL212W TDA5Q06417 326 aaKnown RBP6.36□□□□□ -1.39
SHR3YDL212W GAL10P04397 699 aa6.35□□□□□ -1.39
SHR3YDL212W CMP2P14747 604 aa6.35□□□□□ -1.39
SHR3YDL212W TAT2P38967 592 aa6.35□□□□□ -1.39
SHR3YDL212W ENV11P53246 860 aa6.35□□□□□ -1.39
SHR3YDL212W YDR132CQ03900 495 aa6.35□□□□□ -1.39
SHR3YDL212W SIZ1Q04195 904 aa6.35□□□□□ -1.39
SHR3YDL212W XYL2Q07993 356 aa6.35□□□□□ -1.39
SHR3YDL212W APL1P27351 700 aa6.34□□□□□ -1.39
SHR3YDL212W NPP2P39997 493 aa6.34□□□□□ -1.39
SHR3YDL212W RRT14P40470 206 aa6.34□□□□□ -1.39
SHR3YDL212W RSM24Q03976 319 aa6.34□□□□□ -1.39
SHR3YDL212W PRP6P19735 899 aaPredicted RBP6.33□□□□□ -1.4
SHR3YDL212W LAM1P38851 1228 aa6.33□□□□□ -1.4
SHR3YDL212W ROT1Q03691 256 aa6.33□□□□□ -1.4
SHR3YDL212W SGD1Q06132 899 aa6.33□□□□□ -1.4
SHR3YDL212W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SHR3YDL212W YPL277CQ08989 487 aa6.33□□□□□ -1.4
SHR3YDL212W GRX1P25373 110 aaKnown RBP6.32□□□□□ -1.4
SHR3YDL212W CDC12P32468 407 aaKnown RBP6.32□□□□□ -1.4
SHR3YDL212W GIC1P38785 314 aa6.32□□□□□ -1.4
SHR3YDL212W SNF7P39929 240 aaKnown RBP6.32□□□□□ -1.4
SHR3YDL212W UBP5P39944 805 aa6.32□□□□□ -1.4
SHR3YDL212W MDM38Q08179 573 aa6.32□□□□□ -1.4
SHR3YDL212W SOD2P00447 233 aa6.31□□□□□ -1.4
SHR3YDL212W THS1P04801 734 aaKnown RBP6.31□□□□□ -1.4
SHR3YDL212W RPS13P05756 151 aaKnown RBP6.31□□□□□ -1.4
SHR3YDL212W MRP8P35719 219 aa6.31□□□□□ -1.4
SHR3YDL212W YBR184WP38299 523 aa6.31□□□□□ -1.4
SHR3YDL212W KRI1P42846 591 aaKnown RBP6.31□□□□□ -1.4
SHR3YDL212W GUS1P46655 708 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
SHR3YDL212W RIM8P53179 542 aa6.31□□□□□ -1.4
SHR3YDL212W MSC2Q03455 724 aa6.31□□□□□ -1.4
SHR3YDL212W KIN2P13186 1147 aaKnown RBP6.3□□□□□ -1.4
SHR3YDL212W MEF2P39677 819 aa6.3□□□□□ -1.4
SHR3YDL212W PFD1P46988 109 aa6.3□□□□□ -1.4
SHR3YDL212W DUS3Q06053 668 aaKnown RBP6.3□□□□□ -1.4
SHR3YDL212W DUS4Q06063 367 aa6.3□□□□□ -1.4
SHR3YDL212W WRS1Q12109 432 aaKnown RBP6.3□□□□□ -1.4
SHR3YDL212W PBY1P38254 753 aa6.29□□□□□ -1.4
SHR3YDL212W SAH1P39954 449 aaKnown RBP6.29□□□□□ -1.4
SHR3YDL212W IRR1P40541 1150 aa6.29□□□□□ -1.4
SHR3YDL212W SRT1Q03175 343 aa6.29□□□□□ -1.4
SHR3YDL212W GCN5Q03330 439 aa6.29□□□□□ -1.4
SHR3YDL212W YLL058WQ12198 575 aa6.29□□□□□ -1.4
SHR3YDL212W CDC6P09119 513 aa6.28□□□□□ -1.4
SHR3YDL212W TOD6P34219 525 aa6.28□□□□□ -1.4
SHR3YDL212W YAP1801P38856 637 aa6.28□□□□□ -1.4
SHR3YDL212W YDR306CQ06640 478 aa6.28□□□□□ -1.4
SHR3YDL212W FMP25Q08023 583 aa6.28□□□□□ -1.4
SHR3YDL212W AFR1P33304 620 aa6.27□□□□□ -1.41
SHR3YDL212W NPP1P25353 742 aa6.26□□□□□ -1.41
SHR3YDL212W HBS1P32769 611 aaKnown RBP6.26□□□□□ -1.41
SHR3YDL212W SPT20P50875 604 aa6.26□□□□□ -1.41
SHR3YDL212W GTF1P53260 183 aaPredicted RBP6.26□□□□□ -1.41
SHR3YDL212W SFB2P53953 876 aa6.26□□□□□ -1.41
SHR3YDL212W NAN1Q02931 896 aaKnown RBP6.26□□□□□ -1.41
SHR3YDL212W YOR352WQ08816 343 aa6.26□□□□□ -1.41
SHR3YDL212W OSW2Q12202 724 aa6.26□□□□□ -1.41
SHR3YDL212W RAD4P14736 754 aa6.25□□□□□ -1.41
SHR3YDL212W FLR1P38124 548 aa6.25□□□□□ -1.41
SHR3YDL212W ERT1P38140 529 aa6.25□□□□□ -1.41
SHR3YDL212W TAF1P46677 1066 aa6.25□□□□□ -1.41
SHR3YDL212W GCV2P49095 1034 aa6.25□□□□□ -1.41
SHR3YDL212W FUN30P31380 1131 aa6.24□□□□□ -1.41
SHR3YDL212W TSL1P38427 1098 aaKnown RBP6.24□□□□□ -1.41
SHR3YDL212W MND2P40577 368 aa6.24□□□□□ -1.41
SHR3YDL212W SRP1Q02821 542 aaKnown RBP6.24□□□□□ -1.41
SHR3YDL212W RPL8BP29453 256 aaKnown RBP6.23□□□□□ -1.41
SHR3YDL212W PPH3P32345 308 aa6.23□□□□□ -1.41
SHR3YDL212W SRP101P32916 621 aa6.23□□□□□ -1.41
SHR3YDL212W ECM21P38167 1117 aaKnown RBP6.23□□□□□ -1.41
SHR3YDL212W CDA1Q06702 301 aa6.23□□□□□ -1.41
SHR3YDL212W GPB1Q08886 897 aa6.23□□□□□ -1.41
SHR3YDL212W PRE10P21242 288 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
SHR3YDL212W CDC20P26309 610 aa6.22□□□□□ -1.41
SHR3YDL212W AAR2P32357 355 aaPredicted RBP6.22□□□□□ -1.41
SHR3YDL212W ZRG8P40021 1076 aa6.22□□□□□ -1.41
SHR3YDL212W ALR2P43553 858 aa6.22□□□□□ -1.41
SHR3YDL212W GYP7P48365 746 aa6.22□□□□□ -1.41
SHR3YDL212W VPS62P53285 467 aa6.22□□□□□ -1.41
SHR3YDL212W BUL2Q03758 920 aaKnown RBP6.22□□□□□ -1.41
SHR3YDL212W UBX5Q06682 500 aa6.22□□□□□ -1.41
SHR3YDL212W ESC8Q08119 714 aa6.22□□□□□ -1.41
SHR3YDL212W HMI1Q12039 706 aa6.22□□□□□ -1.41
SHR3YDL212W ENA1P13587 1091 aa6.21□□□□□ -1.42
SHR3YDL212W PRP9P19736 530 aaKnown RBP6.21□□□□□ -1.42
SHR3YDL212W EMC1P25574 760 aa6.21□□□□□ -1.42
SHR3YDL212W SIT1P39980 628 aa6.21□□□□□ -1.42
SHR3YDL212W YER158CP40095 573 aa6.21□□□□□ -1.42
SHR3YDL212W UTP8P53276 713 aaKnown RBP6.21□□□□□ -1.42
SHR3YDL212W ENA2Q01896 1091 aa6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms