RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W NPR1P22211 790 aa2.19□□□□□ -2.06
TRM3YDL112W SPO20Q04359 397 aa2.19□□□□□ -2.06
TRM3YDL112W NSE3Q05541 303 aa2.19□□□□□ -2.06
TRM3YDL112W IRC3Q06683 689 aa2.19□□□□□ -2.06
TRM3YDL112W SBP1P10080 294 aaKnown RBP2.19□□□□□ -2.06
TRM3YDL112W RPC31P17890 251 aa2.19□□□□□ -2.06
TRM3YDL112W NAR1P23503 491 aaKnown RBP2.19□□□□□ -2.06
TRM3YDL112W PEA2P40091 420 aa2.19□□□□□ -2.06
TRM3YDL112W YNR065CP53751 1116 aa2.19□□□□□ -2.06
TRM3YDL112W CRF1Q04930 467 aa2.19□□□□□ -2.06
TRM3YDL112W EST2Q06163 884 aa2.19□□□□□ -2.06
TRM3YDL112W REC8Q12188 680 aa2.19□□□□□ -2.06
TRM3YDL112W MSM1P22438 575 aa2.18□□□□□ -2.06
TRM3YDL112W ARE1P25628 610 aa2.18□□□□□ -2.06
TRM3YDL112W NCS6P53088 359 aa2.18□□□□□ -2.06
TRM3YDL112W PDS5Q04264 1277 aa2.18□□□□□ -2.06
TRM3YDL112W UBX5Q06682 500 aa2.18□□□□□ -2.06
TRM3YDL112W GLO4Q12320 285 aa2.18□□□□□ -2.06
TRM3YDL112W INO1P11986 533 aa2.18□□□□□ -2.06
TRM3YDL112W YBR284WP38150 797 aa2.18□□□□□ -2.06
TRM3YDL112W RRT6P53117 311 aaPredicted RBP2.18□□□□□ -2.06
TRM3YDL112W TPP1Q03796 238 aa2.18□□□□□ -2.06
TRM3YDL112W SYT1Q06836 1226 aa2.18□□□□□ -2.06
TRM3YDL112W AI1P03875 834 aa2.18□□□□□ -2.06
TRM3YDL112W MLS1P30952 554 aa2.18□□□□□ -2.06
TRM3YDL112W MAE1P36013 669 aaKnown RBP2.18□□□□□ -2.06
TRM3YDL112W GPT2P36148 743 aa2.18□□□□□ -2.06
TRM3YDL112W SLN1P39928 1220 aaPredicted RBP2.18□□□□□ -2.06
TRM3YDL112W YGR117CP53270 476 aa2.18□□□□□ -2.06
TRM3YDL112W DOT1Q04089 582 aaKnown RBP2.18□□□□□ -2.06
TRM3YDL112W ADR1P07248 1323 aa2.18□□□□□ -2.06
TRM3YDL112W VTC4P47075 721 aa2.18□□□□□ -2.06
TRM3YDL112W HAS1Q03532 505 aaKnown RBP2.18□□□□□ -2.06
TRM3YDL112W SPP382Q06411 708 aaPredicted RBP2.18□□□□□ -2.06
TRM3YDL112W PSF3Q12146 194 aa2.18□□□□□ -2.06
TRM3YDL112W PTC5Q12511 572 aa2.18□□□□□ -2.06
TRM3YDL112W TY1A-LR4P0C2I8 440 aaKnown RBP2.17□□□□□ -2.06
TRM3YDL112W TY1A-DR6P0CX70 440 aa2.17□□□□□ -2.06
TRM3YDL112W TY1A-ER1P0CX71 440 aa2.17□□□□□ -2.06
TRM3YDL112W TY1A-LR2P0CX72 440 aa2.17□□□□□ -2.06
TRM3YDL112W TY1A-PLP0CX73 440 aa2.17□□□□□ -2.06
TRM3YDL112W TY1A-JR1P0CX74 440 aa2.17□□□□□ -2.06
TRM3YDL112W TY1A-LR3P0CX75 440 aa2.17□□□□□ -2.06
TRM3YDL112W TY1A-ML2P0CX76 440 aa2.17□□□□□ -2.06
TRM3YDL112W SHU2P38957 223 aa2.17□□□□□ -2.06
TRM3YDL112W HEH2Q03281 663 aa2.17□□□□□ -2.06
TRM3YDL112W ELG1Q12050 791 aa2.17□□□□□ -2.06
TRM3YDL112W TY1A-GR1Q12085 440 aa2.17□□□□□ -2.06
TRM3YDL112W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.17□□□□□ -2.06
TRM3YDL112W TY1A-OLQ92392 440 aaKnown RBP2.17□□□□□ -2.06
TRM3YDL112W YKL069WP36088 180 aa2.17□□□□□ -2.06
TRM3YDL112W RVS167P39743 482 aaKnown RBP2.17□□□□□ -2.06
TRM3YDL112W YGL176CP46945 554 aa2.17□□□□□ -2.06
TRM3YDL112W YGR122WP53272 402 aa2.17□□□□□ -2.06
TRM3YDL112W CTR9P89105 1077 aa2.17□□□□□ -2.06
TRM3YDL112W YDR306CQ06640 478 aa2.17□□□□□ -2.06
TRM3YDL112W THS1P04801 734 aaKnown RBP2.17□□□□□ -2.06
TRM3YDL112W RPP1AP05318 106 aaPredicted RBP2.17□□□□□ -2.06
TRM3YDL112W ICL1P28240 557 aaPredicted RBP2.17□□□□□ -2.06
TRM3YDL112W AIM26P32858 118 aa2.17□□□□□ -2.06
TRM3YDL112W MSC7P38694 644 aa2.17□□□□□ -2.06
TRM3YDL112W YMR187CQ03236 431 aa2.17□□□□□ -2.06
TRM3YDL112W RSB1Q08417 382 aa2.17□□□□□ -2.06
TRM3YDL112W CMR1Q12510 522 aaKnown RBP2.17□□□□□ -2.06
TRM3YDL112W MAC1P35192 417 aa2.16□□□□□ -2.06
TRM3YDL112W PAM1P37304 830 aaKnown RBP2.16□□□□□ -2.06
TRM3YDL112W MBP1P39678 833 aa2.16□□□□□ -2.06
TRM3YDL112W BUD27P43573 796 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
TRM3YDL112W YPR196WQ06595 470 aa2.16□□□□□ -2.06
TRM3YDL112W YGR125WP53273 1036 aa2.16□□□□□ -2.06
TRM3YDL112W ADI1Q03677 179 aa2.16□□□□□ -2.06
TRM3YDL112W MTC5Q03897 1148 aa2.16□□□□□ -2.06
TRM3YDL112W MCD1Q12158 566 aa2.16□□□□□ -2.06
TRM3YDL112W OSH2Q12451 1283 aa2.16□□□□□ -2.06
TRM3YDL112W YAR028WP39548 234 aa2.16□□□□□ -2.06
TRM3YDL112W PIC2P40035 300 aa2.16□□□□□ -2.06
TRM3YDL112W ALR2P43553 858 aa2.16□□□□□ -2.06
TRM3YDL112W RSC4Q02206 625 aa2.16□□□□□ -2.06
TRM3YDL112W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
TRM3YDL112W YOL057WQ08225 711 aa2.16□□□□□ -2.06
TRM3YDL112W ALE1Q08548 619 aa2.16□□□□□ -2.06
TRM3YDL112W SER1P33330 395 aaKnown RBP2.15□□□□□ -2.06
TRM3YDL112W SAH1P39954 449 aaKnown RBP2.15□□□□□ -2.06
TRM3YDL112W DNM1P54861 757 aa2.15□□□□□ -2.06
TRM3YDL112W SPO71Q03868 1245 aa2.15□□□□□ -2.06
TRM3YDL112W CTI6Q08923 506 aa2.15□□□□□ -2.06
TRM3YDL112W HXK1P04806 485 aaKnown RBP2.15□□□□□ -2.06
TRM3YDL112W CCC2P38995 1004 aa2.15□□□□□ -2.06
TRM3YDL112W LYS5P50113 272 aa2.15□□□□□ -2.06
TRM3YDL112W HUL5P53119 910 aa2.15□□□□□ -2.06
TRM3YDL112W RRG1Q12167 365 aaPredicted RBP2.15□□□□□ -2.06
TRM3YDL112W DPH6Q12429 685 aa2.15□□□□□ -2.06
TRM3YDL112W KRE2P27809 442 aa2.15□□□□□ -2.07
TRM3YDL112W LIP5P32875 414 aa2.15□□□□□ -2.07
TRM3YDL112W NUG1P40010 520 aaKnown RBP2.15□□□□□ -2.07
TRM3YDL112W RRP46P53256 223 aaPredicted RBP2.15□□□□□ -2.07
TRM3YDL112W FAR11P53917 953 aa2.15□□□□□ -2.07
TRM3YDL112W SDH1Q00711 640 aa2.15□□□□□ -2.07
TRM3YDL112W VPS16Q03308 798 aa2.15□□□□□ -2.07
TRM3YDL112W RRP15Q06511 250 aaPredicted RBP2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms