RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C TDA9Q04545 1251 aa6.48□□□□□ -1.37
SEC18YBR080C DPL1Q05567 589 aa6.48□□□□□ -1.37
SEC18YBR080C MPC54Q08550 464 aa6.48□□□□□ -1.37
SEC18YBR080C DPH6Q12429 685 aa6.48□□□□□ -1.37
SEC18YBR080C RAM1P22007 431 aa6.48□□□□□ -1.37
SEC18YBR080C MSN1P22148 382 aa6.48□□□□□ -1.37
SEC18YBR080C PAP2P53632 584 aaKnown RBP6.48□□□□□ -1.37
SEC18YBR080C CEG1Q01159 459 aaPredicted RBP6.48□□□□□ -1.37
SEC18YBR080C RAD53P22216 821 aa6.47□□□□□ -1.37
SEC18YBR080C DSS1P39112 969 aa6.47□□□□□ -1.37
SEC18YBR080C MBP1P39678 833 aa6.47□□□□□ -1.37
SEC18YBR080C HOT1Q03213 719 aa6.47□□□□□ -1.37
SEC18YBR080C YDL124WQ07551 312 aaKnown RBP6.47□□□□□ -1.37
SEC18YBR080C SEC23P15303 768 aaKnown RBP6.47□□□□□ -1.37
SEC18YBR080C LYP1P32487 611 aa6.47□□□□□ -1.37
SEC18YBR080C ROG3P43602 733 aa6.47□□□□□ -1.37
SEC18YBR080C IRC6P43615 237 aa6.47□□□□□ -1.37
SEC18YBR080C MON1P53129 644 aa6.47□□□□□ -1.37
SEC18YBR080C CAF120P53836 1060 aa6.47□□□□□ -1.37
SEC18YBR080C YKU80Q04437 629 aa6.47□□□□□ -1.37
SEC18YBR080C AAC3P18238 307 aa6.46□□□□□ -1.37
SEC18YBR080C IRS4P36115 615 aaKnown RBP6.46□□□□□ -1.37
SEC18YBR080C MXR1P40029 184 aa6.46□□□□□ -1.37
SEC18YBR080C ATP22P50273 684 aaPredicted RBP6.46□□□□□ -1.37
SEC18YBR080C PCL10P53124 433 aa6.46□□□□□ -1.37
SEC18YBR080C SSL2Q00578 843 aa6.46□□□□□ -1.37
SEC18YBR080C SFL1P20134 766 aa6.46□□□□□ -1.38
SEC18YBR080C PAN5P38787 379 aa6.46□□□□□ -1.38
SEC18YBR080C UBP6P43593 499 aaKnown RBP6.46□□□□□ -1.38
SEC18YBR080C YML6P51998 286 aa6.46□□□□□ -1.38
SEC18YBR080C YGL140CP53120 1219 aa6.46□□□□□ -1.38
SEC18YBR080C TIM10P87108 93 aa6.46□□□□□ -1.38
SEC18YBR080C MSH6Q03834 1242 aa6.46□□□□□ -1.38
SEC18YBR080C RED1P14291 827 aa6.45□□□□□ -1.38
SEC18YBR080C ACE2P21192 770 aa6.45□□□□□ -1.38
SEC18YBR080C SAP155P43612 1002 aa6.45□□□□□ -1.38
SEC18YBR080C CNN1P43618 361 aa6.45□□□□□ -1.38
SEC18YBR080C KAR2P16474 682 aaKnown RBP6.45□□□□□ -1.38
SEC18YBR080C NAB2P32505 525 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
SEC18YBR080C RDH54P38086 958 aa6.45□□□□□ -1.38
SEC18YBR080C LSM5P40089 93 aaKnown RBP6.45□□□□□ -1.38
SEC18YBR080C SAE2P46946 345 aa6.45□□□□□ -1.38
SEC18YBR080C ELP4Q02884 456 aaKnown RBP6.45□□□□□ -1.38
SEC18YBR080C SPO71Q03868 1245 aa6.45□□□□□ -1.38
SEC18YBR080C YTM1Q12024 460 aaPredicted RBP6.45□□□□□ -1.38
SEC18YBR080C RRP36Q12481 300 aaPredicted RBP6.45□□□□□ -1.38
SEC18YBR080C CMP2P14747 604 aa6.44□□□□□ -1.38
SEC18YBR080C RPC53P25441 422 aa6.44□□□□□ -1.38
SEC18YBR080C PRP19P32523 503 aaKnown RBP6.44□□□□□ -1.38
SEC18YBR080C SER1P33330 395 aaKnown RBP6.44□□□□□ -1.38
SEC18YBR080C BIT2P38346 545 aa6.44□□□□□ -1.38
SEC18YBR080C CKB2P38930 258 aa6.44□□□□□ -1.38
SEC18YBR080C NOP16P40007 231 aaKnown RBP6.44□□□□□ -1.38
SEC18YBR080C MID1P41821 548 aa6.44□□□□□ -1.38
SEC18YBR080C IML2P47031 731 aa6.44□□□□□ -1.38
SEC18YBR080C TFC6Q06339 672 aa6.44□□□□□ -1.38
SEC18YBR080C NBA1Q08229 501 aaKnown RBP6.44□□□□□ -1.38
SEC18YBR080C BI4P03879 638 aa6.43□□□□□ -1.38
SEC18YBR080C IRE1P32361 1115 aa6.43□□□□□ -1.38
SEC18YBR080C YKL100CP34248 587 aa6.43□□□□□ -1.38
SEC18YBR080C PCM1P38628 557 aaKnown RBP6.43□□□□□ -1.38
SEC18YBR080C VPS41P38959 992 aa6.43□□□□□ -1.38
SEC18YBR080C SBE2P42223 864 aaKnown RBP6.43□□□□□ -1.38
SEC18YBR080C SET4P42948 560 aa6.43□□□□□ -1.38
SEC18YBR080C RMD8P43620 662 aa6.43□□□□□ -1.38
SEC18YBR080C YNL165WP53891 406 aa6.43□□□□□ -1.38
SEC18YBR080C SIW14P53965 281 aa6.43□□□□□ -1.38
SEC18YBR080C PRP9P19736 530 aaKnown RBP6.43□□□□□ -1.38
SEC18YBR080C PAH1P32567 862 aa6.43□□□□□ -1.38
SEC18YBR080C YBR238CP38330 731 aaKnown RBP6.43□□□□□ -1.38
SEC18YBR080C GZF3P42944 551 aaKnown RBP6.43□□□□□ -1.38
SEC18YBR080C YNR063WP53749 607 aa6.43□□□□□ -1.38
SEC18YBR080C ECM38Q05902 660 aaPredicted RBP6.43□□□□□ -1.38
SEC18YBR080C YOL114CQ12322 202 aa6.43□□□□□ -1.38
SEC18YBR080C SPO21Q12411 609 aa6.43□□□□□ -1.38
SEC18YBR080C MSD1P15179 658 aaKnown RBP6.42□□□□□ -1.38
SEC18YBR080C CBF2P32504 956 aa6.42□□□□□ -1.38
SEC18YBR080C HXT10P43581 546 aa6.42□□□□□ -1.38
SEC18YBR080C RRG1Q12167 365 aaPredicted RBP6.42□□□□□ -1.38
SEC18YBR080C SPT7P35177 1332 aa6.42□□□□□ -1.38
SEC18YBR080C RAD18P10862 487 aa6.42□□□□□ -1.38
SEC18YBR080C MRP7P12687 371 aa6.42□□□□□ -1.38
SEC18YBR080C SEC18P18759 758 aaKnown RBP6.42□□□□□ -1.38
SEC18YBR080C NPL6P32832 435 aa6.42□□□□□ -1.38
SEC18YBR080C YEL1P34225 687 aa6.42□□□□□ -1.38
SEC18YBR080C SCD5P34758 872 aa6.42□□□□□ -1.38
SEC18YBR080C TBS1P38114 1094 aa6.42□□□□□ -1.38
SEC18YBR080C YBR284WP38150 797 aa6.42□□□□□ -1.38
SEC18YBR080C PSY4P38193 441 aa6.42□□□□□ -1.38
SEC18YBR080C RIC1P40395 1056 aa6.42□□□□□ -1.38
SEC18YBR080C DPH1P40487 425 aaKnown RBP6.42□□□□□ -1.38
SEC18YBR080C ECM9Q02202 377 aa6.42□□□□□ -1.38
SEC18YBR080C TIF35Q04067 274 aaKnown RBP6.42□□□□□ -1.38
SEC18YBR080C ISU2Q12056 156 aa6.42□□□□□ -1.38
SEC18YBR080C HSH49Q99181 213 aaPredicted RBP6.42□□□□□ -1.38
SEC18YBR080C MCM1P11746 286 aa6.41□□□□□ -1.38
SEC18YBR080C SIS1P25294 352 aaKnown RBP6.41□□□□□ -1.38
SEC18YBR080C RAD51P25454 400 aa6.41□□□□□ -1.38
SEC18YBR080C CDC60P26637 1090 aaKnown RBP6.41□□□□□ -1.38
SEC18YBR080C TPD3P31383 635 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms