RNA–Protein interactions for RNA: YAL048C

GEM1, Transcript of Outer mitochondrial membrane GTPase, subunit of the ERMES complex, yeast

Gene GEM1, Length 1,989 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEM1	YAL048C	ERR1	P0CX10	437 aa		4.85	□□□□□ -1.63
GEM1	YAL048C	ERR2	P0CX11	437 aa		4.85	□□□□□ -1.63
GEM1	YAL048C	ARE1	P25628	610 aa		4.85	□□□□□ -1.63
GEM1	YAL048C	SFA1	P32771	386 aa		4.85	□□□□□ -1.63
GEM1	YAL048C	SMY2	P32909	740 aa	Known RBP	4.85	□□□□□ -1.63
GEM1	YAL048C	THI72	Q08579	599 aa		4.85	□□□□□ -1.63
GEM1	YAL048C	SPO21	Q12411	609 aa		4.85	□□□□□ -1.63
GEM1	YAL048C	CAN1	P04817	590 aa		4.84	□□□□□ -1.63
GEM1	YAL048C	RPA135	P22138	1203 aa	Known RBP	4.84	□□□□□ -1.63
GEM1	YAL048C	NOP2	P40991	618 aa	Known RBP	4.84	□□□□□ -1.63
GEM1	YAL048C	ALR2	P43553	858 aa		4.84	□□□□□ -1.63
GEM1	YAL048C	UTP8	P53276	713 aa	Known RBP	4.84	□□□□□ -1.63
GEM1	YAL048C	YPL260W	Q08977	551 aa		4.84	□□□□□ -1.63
GEM1	YAL048C	AI3	P03877	415 aa		4.84	□□□□□ -1.64
GEM1	YAL048C	GRX4	P32642	244 aa		4.84	□□□□□ -1.64
GEM1	YAL048C	NNK1	P36003	928 aa		4.84	□□□□□ -1.64
GEM1	YAL048C	MCX1	P38323	520 aa	Predicted RBP	4.84	□□□□□ -1.64
GEM1	YAL048C	CHZ1	P40019	153 aa	Predicted RBP	4.84	□□□□□ -1.64
GEM1	YAL048C	PRY1	P47032	299 aa		4.84	□□□□□ -1.64
GEM1	YAL048C	YJL045W	P47052	634 aa		4.84	□□□□□ -1.64
GEM1	YAL048C	TAF8	Q03750	510 aa		4.84	□□□□□ -1.64
GEM1	YAL048C	GIR2	Q03768	265 aa	Predicted RBP	4.84	□□□□□ -1.64
GEM1	YAL048C	VPS15	P22219	1454 aa		4.83	□□□□□ -1.64
GEM1	YAL048C	PHO8	P11491	566 aa		4.83	□□□□□ -1.64
GEM1	YAL048C	PRP9	P19736	530 aa	Known RBP	4.83	□□□□□ -1.64
GEM1	YAL048C	MDJ1	P35191	511 aa		4.83	□□□□□ -1.64
GEM1	YAL048C	SNF7	P39929	240 aa	Known RBP	4.83	□□□□□ -1.64
GEM1	YAL048C	RPT2	P40327	437 aa	Known RBP	4.83	□□□□□ -1.64
GEM1	YAL048C	RTA1	P53047	317 aa		4.83	□□□□□ -1.64
GEM1	YAL048C	SPP382	Q06411	708 aa	Predicted RBP	4.83	□□□□□ -1.64
GEM1	YAL048C	RLP24	Q07915	199 aa	Known RBP	4.83	□□□□□ -1.64
GEM1	YAL048C	TOP2	P06786	1428 aa	Known RBP	4.82	□□□□□ -1.64
GEM1	YAL048C	DBP2	P24783	546 aa	Known RBP	4.82	□□□□□ -1.64
GEM1	YAL048C	HBS1	P32769	611 aa	Known RBP	4.82	□□□□□ -1.64
GEM1	YAL048C	MPE1	P35728	441 aa	Known RBP	4.82	□□□□□ -1.64
GEM1	YAL048C	PNT1	P38969	423 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	ALT1	P52893	592 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	EAR1	Q03212	550 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	TMA64	Q04600	565 aa	Known RBP	4.82	□□□□□ -1.64
GEM1	YAL048C	MMS22	Q06164	1454 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	TY1B-BR	Q12193	1756 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	TY1B-GR3	Q12316	1755 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	TY1B-OR	Q92393	1755 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	RPL11A	P0C0W9	174 aa	Known RBP	4.82	□□□□□ -1.64
GEM1	YAL048C	BET3	P36149	193 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	GGA2	P38817	585 aa	Known RBP	4.82	□□□□□ -1.64
GEM1	YAL048C	MXR1	P40029	184 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	YFL054C	P43549	646 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	NSG2	P53898	299 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	YPL062W	Q02781	134 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	TPP1	Q03796	238 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	HRK1	Q08732	759 aa	Known RBP	4.82	□□□□□ -1.64
GEM1	YAL048C	YLR125W	Q12138	136 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	YDR215C	Q12240	137 aa		4.82	□□□□□ -1.64
GEM1	YAL048C	RPL11B	Q3E757	174 aa	Predicted RBP	4.82	□□□□□ -1.64
GEM1	YAL048C	MET6	P05694	767 aa	Known RBP	4.81	□□□□□ -1.64
GEM1	YAL048C	RPS4A	P0CX35	261 aa	Known RBP	4.81	□□□□□ -1.64
GEM1	YAL048C	RPS4B	P0CX36	261 aa	Known RBP	4.81	□□□□□ -1.64
GEM1	YAL048C	RSC6	P25632	483 aa		4.81	□□□□□ -1.64
GEM1	YAL048C	ERP2	P39704	215 aa		4.81	□□□□□ -1.64
GEM1	YAL048C	POB3	Q04636	552 aa	Known RBP	4.81	□□□□□ -1.64
GEM1	YAL048C	PUS7	Q08647	676 aa	Known RBP	4.81	□□□□□ -1.64
GEM1	YAL048C	RPS0A	P32905	252 aa	Known RBP	4.8	□□□□□ -1.64
GEM1	YAL048C	CCC2	P38995	1004 aa		4.8	□□□□□ -1.64
GEM1	YAL048C	HUL4	P40985	892 aa		4.8	□□□□□ -1.64
GEM1	YAL048C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
GEM1	YAL048C	DNF2	Q12675	1612 aa		4.8	□□□□□ -1.64
GEM1	YAL048C	YCK2	P23292	546 aa	Known RBP	4.8	□□□□□ -1.64
GEM1	YAL048C	SLN1	P39928	1220 aa	Predicted RBP	4.8	□□□□□ -1.64
GEM1	YAL048C	ARI1	P53111	347 aa	Known RBP	4.8	□□□□□ -1.64
GEM1	YAL048C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
GEM1	YAL048C	ECM16	Q04217	1267 aa	Known RBP	4.8	□□□□□ -1.64
GEM1	YAL048C	YDR306C	Q06640	478 aa		4.8	□□□□□ -1.64
GEM1	YAL048C	GIC2	Q06648	383 aa		4.8	□□□□□ -1.64
GEM1	YAL048C	HBN1	Q96VH4	193 aa		4.8	□□□□□ -1.64
GEM1	YAL048C	TY2B-LR1	P0C2J3	1770 aa		4.79	□□□□□ -1.64
GEM1	YAL048C	TY2B-F	P0CX63	1770 aa		4.79	□□□□□ -1.64
GEM1	YAL048C	TY2B-GR2	P0CX64	1770 aa		4.79	□□□□□ -1.64
GEM1	YAL048C	TY2B-C	P25384	1770 aa		4.79	□□□□□ -1.64
GEM1	YAL048C	TY2B-DR2	Q03494	1770 aa		4.79	□□□□□ -1.64
GEM1	YAL048C	TY1B-DR1	Q03855	1755 aa		4.79	□□□□□ -1.64
GEM1	YAL048C	TY2B-DR3	Q07791	1770 aa	Known RBP	4.79	□□□□□ -1.64
GEM1	YAL048C	TY2B-OR1	Q12113	1770 aa		4.79	□□□□□ -1.64
GEM1	YAL048C	TY2B-DR1	Q12472	1770 aa		4.79	□□□□□ -1.64
GEM1	YAL048C	TY2B-OR2	Q12501	1770 aa		4.79	□□□□□ -1.64
GEM1	YAL048C	NUP159	P40477	1460 aa		4.79	□□□□□ -1.64
GEM1	YAL048C	AKR1	P39010	764 aa		4.79	□□□□□ -1.64
GEM1	YAL048C	RPN3	P40016	523 aa	Known RBP	4.79	□□□□□ -1.64
GEM1	YAL048C	DNM1	P54861	757 aa		4.79	□□□□□ -1.64
GEM1	YAL048C	TOP3	P13099	656 aa		4.78	□□□□□ -1.64
GEM1	YAL048C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
GEM1	YAL048C	NAM7	P30771	971 aa	Known RBP	4.78	□□□□□ -1.64
GEM1	YAL048C	THI4	P32318	326 aa		4.78	□□□□□ -1.64
GEM1	YAL048C	YSC84	P32793	468 aa		4.78	□□□□□ -1.64
GEM1	YAL048C	ENP1	P38333	483 aa	Known RBP	4.78	□□□□□ -1.64
GEM1	YAL048C	NOC2	P39744	710 aa	Known RBP	4.78	□□□□□ -1.64
GEM1	YAL048C	VPS27	P40343	622 aa	Known RBP	4.78	□□□□□ -1.64
GEM1	YAL048C	YGL081W	P53156	320 aa		4.78	□□□□□ -1.64
GEM1	YAL048C	DUS3	Q06053	668 aa	Known RBP	4.78	□□□□□ -1.64
GEM1	YAL048C	YDL124W	Q07551	312 aa	Known RBP	4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms