RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PI4KAP1Q8N8J0 262 aa14.28□□□□□ -0.12
CLN6-217ENST00000636964 ATP10DQ9P241 1426 aa14.28□□□□□ -0.12
CLN6-217ENST00000636964 DCTPP1Q9H773 170 aa14.27□□□□□ -0.12
CLN6-217ENST00000636964 C16orf71Q8IYS4 520 aaPredicted RBP14.27□□□□□ -0.13
CLN6-217ENST00000636964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.27□□□□□ -0.13
CLN6-217ENST00000636964 HOXB7P09629 217 aa14.26□□□□□ -0.13
CLN6-217ENST00000636964 DDX54Q8TDD1 881 aaKnown RBP14.26□□□□□ -0.13
CLN6-217ENST00000636964 SMARCA5O60264 1052 aaPredicted RBP14.26□□□□□ -0.13
CLN6-217ENST00000636964 GNAI2P04899 355 aa14.26□□□□□ -0.13
CLN6-217ENST00000636964 AIMP1Q12904 312 aaKnown RBP14.25□□□□□ -0.13
CLN6-217ENST00000636964 DCAF5Q96JK2 942 aa14.25□□□□□ -0.13
CLN6-217ENST00000636964 DBF4Q9UBU7 674 aaPredicted RBP14.25□□□□□ -0.13
CLN6-217ENST00000636964 ZCRB1Q8TBF4 217 aaKnown RBP14.25□□□□□ -0.13
CLN6-217ENST00000636964 ZNF496Q96IT1 587 aaPredicted RBP14.25□□□□□ -0.13
CLN6-217ENST00000636964 USP44Q9H0E7 712 aa14.25□□□□□ -0.13
CLN6-217ENST00000636964 PIP4K2AP48426 406 aaPredicted RBP14.25□□□□□ -0.13
CLN6-217ENST00000636964 CABP4P57796 275 aa14.25□□□□□ -0.13
CLN6-217ENST00000636964 LRRFIP2Q9Y608 721 aaKnown RBP14.25□□□□□ -0.13
CLN6-217ENST00000636964 COL5A2P05997 1499 aaPredicted RBP14.24□□□□□ -0.13
CLN6-217ENST00000636964 DNAAF4Q8WXU2 420 aa14.24□□□□□ -0.13
CLN6-217ENST00000636964 SRCIN1Q9C0H9 1055 aa14.24□□□□□ -0.13
CLN6-217ENST00000636964 BTG4Q9NY30 223 aa14.24□□□□□ -0.13
CLN6-217ENST00000636964 OVOS2A0A0G2JMS6 1433 aa14.24□□□□□ -0.13
CLN6-217ENST00000636964 GNAI3P08754 354 aa14.23□□□□□ -0.13
CLN6-217ENST00000636964 MYL6BP14649 208 aa14.23□□□□□ -0.13
CLN6-217ENST00000636964 OTUD7AQ8TE49 926 aaPredicted RBP14.23□□□□□ -0.13
CLN6-217ENST00000636964 PANK2Q9BZ23 570 aa14.23□□□□□ -0.13
CLN6-217ENST00000636964 PNMA6EA0A0J9YXQ4 647 aa14.23□□□□□ -0.13
CLN6-217ENST00000636964 XRCC6P12956 609 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLN6-217ENST00000636964 TTC5Q8N0Z6 440 aa14.23□□□□□ -0.13
CLN6-217ENST00000636964 HEG1Q9ULI3 1381 aa14.23□□□□□ -0.13
CLN6-217ENST00000636964 CACNA1FO60840 1977 aa14.23□□□□□ -0.13
CLN6-217ENST00000636964 IL2RBP14784 551 aa14.23□□□□□ -0.13
CLN6-217ENST00000636964 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLN6-217ENST00000636964 EXOC6BQ9Y2D4 811 aa14.23□□□□□ -0.13
CLN6-217ENST00000636964 RRP9O43818 475 aaKnown RBP14.22□□□□□ -0.13
CLN6-217ENST00000636964 UBTFL1P0CB47 393 aaPredicted RBP14.22□□□□□ -0.13
CLN6-217ENST00000636964 GTF2E1P29083 439 aaPredicted RBP14.22□□□□□ -0.13
CLN6-217ENST00000636964 MFAP1P55081 439 aaKnown RBP14.22□□□□□ -0.13
CLN6-217ENST00000636964 BCCIPQ9P287 314 aaKnown RBP eCLIP14.22□□□□□ -0.13
CLN6-217ENST00000636964 MAP3K2Q9Y2U5 619 aa14.22□□□□□ -0.13
CLN6-217ENST00000636964 USP16Q9Y5T5 823 aa14.22□□□□□ -0.13
CLN6-217ENST00000636964 NBPF7P0C2Y1 421 aaPredicted RBP14.22□□□□□ -0.13
CLN6-217ENST00000636964 CARD10Q9BWT7 1032 aa14.22□□□□□ -0.13
CLN6-217ENST00000636964 ANTXR1Q9H6X2 564 aa14.22□□□□□ -0.13
CLN6-217ENST00000636964 HMMRO75330 724 aa14.21□□□□□ -0.13
CLN6-217ENST00000636964 ADCY9O60503 1353 aa14.21□□□□□ -0.13
CLN6-217ENST00000636964 HSP90AB1P08238 724 aaKnown RBP14.21□□□□□ -0.13
CLN6-217ENST00000636964 BEND3Q5T5X7 828 aa14.21□□□□□ -0.13
CLN6-217ENST00000636964 SCN11AQ9UI33 1791 aa14.21□□□□□ -0.13
CLN6-217ENST00000636964 ABCC6O95255 1503 aa14.21□□□□□ -0.13
CLN6-217ENST00000636964 SIPA1L3O60292 1781 aaPredicted RBP14.21□□□□□ -0.14
CLN6-217ENST00000636964 NHSL1Q5SYE7 1610 aa14.21□□□□□ -0.14
CLN6-217ENST00000636964 PLEKHM2Q8IWE5 1019 aa14.2□□□□□ -0.14
CLN6-217ENST00000636964 PDIA6Q15084 440 aa14.2□□□□□ -0.14
CLN6-217ENST00000636964 CWF19L2Q2TBE0 894 aaKnown RBP14.2□□□□□ -0.14
CLN6-217ENST00000636964 PCDH11XQ9BZA7 1347 aa14.2□□□□□ -0.14
CLN6-217ENST00000636964 PCDH11YQ9BZA8 1340 aa14.2□□□□□ -0.14
CLN6-217ENST00000636964 PIP4K2BP78356 416 aa14.2□□□□□ -0.14
CLN6-217ENST00000636964 SLKQ9H2G2 1235 aaPredicted RBP14.2□□□□□ -0.14
CLN6-217ENST00000636964 UPF2Q9HAU5 1272 aaKnown RBP14.2□□□□□ -0.14
CLN6-217ENST00000636964 ADAMTS7Q9UKP4 1686 aa14.19□□□□□ -0.14
CLN6-217ENST00000636964 ABCA3Q99758 1704 aa14.19□□□□□ -0.14
CLN6-217ENST00000636964 HSP90B1P14625 803 aaKnown RBP14.19□□□□□ -0.14
CLN6-217ENST00000636964 ATP8B2P98198 1209 aa14.19□□□□□ -0.14
CLN6-217ENST00000636964 DDX21Q9NR30 783 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLN6-217ENST00000636964 HYPKQ9NX55 129 aa14.19□□□□□ -0.14
CLN6-217ENST00000636964 CLCN1P35523 988 aa14.19□□□□□ -0.14
CLN6-217ENST00000636964 SECISBP2LQ93073 1101 aaKnown RBP14.19□□□□□ -0.14
CLN6-217ENST00000636964 FSD2A1L4K1 749 aa14.18□□□□□ -0.14
CLN6-217ENST00000636964 KSR2Q6VAB6 950 aa14.18□□□□□ -0.14
CLN6-217ENST00000636964 ROBO1Q9Y6N7 1651 aa14.18□□□□□ -0.14
CLN6-217ENST00000636964 ADAMTS2O95450 1211 aa14.18□□□□□ -0.14
CLN6-217ENST00000636964 BMP2KLQ5H9B9 411 aa14.18□□□□□ -0.14
CLN6-217ENST00000636964 FMNL2Q96PY5 1086 aa14.18□□□□□ -0.14
CLN6-217ENST00000636964 PTCD1O75127 700 aaKnown RBP14.18□□□□□ -0.14
CLN6-217ENST00000636964 SNRPA1P09661 255 aaKnown RBP14.18□□□□□ -0.14
CLN6-217ENST00000636964 GSPT1P15170 499 aaKnown RBP14.17□□□□□ -0.14
CLN6-217ENST00000636964 COPS6Q7L5N1 327 aa14.17□□□□□ -0.14
CLN6-217ENST00000636964 XAGE3Q8WTP9 111 aa14.17□□□□□ -0.14
CLN6-217ENST00000636964 PKD1L3Q7Z443 1732 aa14.17□□□□□ -0.14
CLN6-217ENST00000636964 PPP1R42Q7Z4L9 355 aa14.17□□□□□ -0.14
CLN6-217ENST00000636964 RIC3Q7Z5B4 369 aa14.17□□□□□ -0.14
CLN6-217ENST00000636964 C9orf78Q9NZ63 289 aaPredicted RBP14.17□□□□□ -0.14
CLN6-217ENST00000636964 PXDNLA1KZ92 1463 aa14.16□□□□□ -0.14
CLN6-217ENST00000636964 ERBB4Q15303 1308 aa14.16□□□□□ -0.14
CLN6-217ENST00000636964 TSHZ3Q63HK5 1081 aa14.16□□□□□ -0.14
CLN6-217ENST00000636964 TBC1D32Q96NH3 1257 aa14.16□□□□□ -0.14
CLN6-217ENST00000636964 NUTM2BA6NNL0 878 aaPredicted RBP14.15□□□□□ -0.14
CLN6-217ENST00000636964 NUTM2EB1AL46 878 aaPredicted RBP14.15□□□□□ -0.14
CLN6-217ENST00000636964 NUTM2AQ8IVF1 878 aaPredicted RBP14.15□□□□□ -0.14
CLN6-217ENST00000636964 FBXO3Q9UK99 471 aa14.15□□□□□ -0.14
CLN6-217ENST00000636964 C5P01031 1676 aa14.15□□□□□ -0.14
CLN6-217ENST00000636964 SRGAP3O43295 1099 aa14.15□□□□□ -0.14
CLN6-217ENST00000636964 L1TD1Q5T7N2 865 aaKnown RBP14.15□□□□□ -0.14
CLN6-217ENST00000636964 DDX58O95786 925 aaKnown RBP14.15□□□□□ -0.14
CLN6-217ENST00000636964 C22orf23Q9BZE7 217 aa14.14□□□□□ -0.15
CLN6-217ENST00000636964 TTC22Q5TAA0 569 aa14.14□□□□□ -0.15
CLN6-217ENST00000636964 TBC1D9Q6ZT07 1266 aa14.14□□□□□ -0.15
CLN6-217ENST00000636964 IL1RAPL2Q9NP60 686 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms