RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 DCTPP1Q9H773 170 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 SMC3Q9UQE7 1217 aa10.91□□□□□ -0.66
GGA3-222ENST00000621217 AKAP4Q5JQC9 854 aa10.9□□□□□ -0.66
GGA3-222ENST00000621217 ZCRB1Q8TBF4 217 aaKnown RBP10.9□□□□□ -0.66
GGA3-222ENST00000621217 PDE1AP54750 535 aa10.9□□□□□ -0.66
GGA3-222ENST00000621217 CNTROBQ8N137 903 aa10.9□□□□□ -0.66
GGA3-222ENST00000621217 PRAMEF22A3QJZ6 481 aa10.9□□□□□ -0.67
GGA3-222ENST00000621217 EXOC5O00471 708 aa10.9□□□□□ -0.67
GGA3-222ENST00000621217 ZKSCAN1P17029 563 aaPredicted RBP10.9□□□□□ -0.67
GGA3-222ENST00000621217 KIF6Q6ZMV9 814 aa10.9□□□□□ -0.67
GGA3-222ENST00000621217 SIRT2Q8IXJ6 389 aa10.9□□□□□ -0.67
GGA3-222ENST00000621217 C8orf37Q96NL8 207 aa10.9□□□□□ -0.67
GGA3-222ENST00000621217 CAMSAP1Q5T5Y3 1602 aa10.9□□□□□ -0.67
GGA3-222ENST00000621217 PPFIA3O75145 1194 aa10.89□□□□□ -0.67
GGA3-222ENST00000621217 HSP90AB4PQ58FF6 505 aa10.89□□□□□ -0.67
GGA3-222ENST00000621217 FMNL2Q96PY5 1086 aa10.89□□□□□ -0.67
GGA3-222ENST00000621217 RBM27Q9P2N5 1060 aaKnown RBP10.89□□□□□ -0.67
GGA3-222ENST00000621217 CD2BP2O95400 341 aaKnown RBP10.89□□□□□ -0.67
GGA3-222ENST00000621217 FBXW7Q969H0 707 aa10.89□□□□□ -0.67
GGA3-222ENST00000621217 MAP3K5Q99683 1374 aa10.89□□□□□ -0.67
GGA3-222ENST00000621217 PTPRCP08575 1304 aa10.89□□□□□ -0.67
GGA3-222ENST00000621217 FRMPD1Q5SYB0 1578 aa10.89□□□□□ -0.67
GGA3-222ENST00000621217 PNMA6EA0A0J9YXQ4 647 aa10.89□□□□□ -0.67
GGA3-222ENST00000621217 FKBP4Q02790 459 aaKnown RBP eCLIP10.89□□□□□ -0.67
GGA3-222ENST00000621217 KLHDC4Q8TBB5 520 aa10.89□□□□□ -0.67
GGA3-222ENST00000621217 BCL11BQ9C0K0 894 aaPredicted RBP10.89□□□□□ -0.67
GGA3-222ENST00000621217 USP6P35125 1406 aa10.89□□□□□ -0.67
GGA3-222ENST00000621217 RNMTO43148 476 aaKnown RBP10.88□□□□□ -0.67
GGA3-222ENST00000621217 XRCC6P12956 609 aaKnown RBP eCLIP10.88□□□□□ -0.671e-6■■■■□ 19.8
GGA3-222ENST00000621217 GSPT1P15170 499 aaKnown RBP10.88□□□□□ -0.67
GGA3-222ENST00000621217 PHF23Q9BUL5 403 aaPredicted RBP10.88□□□□□ -0.67
GGA3-222ENST00000621217 RUFY2Q8WXA3 655 aa10.88□□□□□ -0.67
GGA3-222ENST00000621217 SIRT1Q96EB6 747 aa10.88□□□□□ -0.67
GGA3-222ENST00000621217 CNNM1Q9NRU3 951 aa10.88□□□□□ -0.67
GGA3-222ENST00000621217 TULP4Q9NRJ4 1543 aa10.88□□□□□ -0.67
GGA3-222ENST00000621217 CHMP4CQ96CF2 233 aa10.88□□□□□ -0.67
GGA3-222ENST00000621217 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
GGA3-222ENST00000621217 DIP2BQ9P265 1576 aa10.88□□□□□ -0.67
GGA3-222ENST00000621217 RBM10P98175 930 aaKnown RBP10.87□□□□□ -0.67
GGA3-222ENST00000621217 TCEANC2Q96MN5 208 aa10.87□□□□□ -0.67
GGA3-222ENST00000621217 QRICH2Q9H0J4 1663 aa10.87□□□□□ -0.67
GGA3-222ENST00000621217 TULP1O00294 542 aaPredicted RBP10.87□□□□□ -0.67
GGA3-222ENST00000621217 PHF14O94880 888 aa10.87□□□□□ -0.67
GGA3-222ENST00000621217 LARP1Q6PKG0 1096 aaKnown RBP10.87□□□□□ -0.67
GGA3-222ENST00000621217 ANKRD13DQ6ZTN6 518 aa10.87□□□□□ -0.67
GGA3-222ENST00000621217 FERMT3Q86UX7 667 aa10.87□□□□□ -0.67
GGA3-222ENST00000621217 SYCE3A1L190 88 aa10.87□□□□□ -0.67
GGA3-222ENST00000621217 VPS37DQ86XT2 251 aa10.87□□□□□ -0.67
GGA3-222ENST00000621217 ESPNB1AK53 854 aa10.87□□□□□ -0.67
GGA3-222ENST00000621217 CEBPZQ03701 1054 aaKnown RBP10.87□□□□□ -0.67
GGA3-222ENST00000621217 JAKMIP1Q96N16 626 aaKnown RBP10.87□□□□□ -0.67
GGA3-222ENST00000621217 BAG4O95429 457 aaKnown RBP10.86□□□□□ -0.67
GGA3-222ENST00000621217 NBPF7P0C2Y1 421 aaPredicted RBP10.86□□□□□ -0.67
GGA3-222ENST00000621217 CCDC57Q2TAC2 916 aa10.86□□□□□ -0.67
GGA3-222ENST00000621217 PRPF40BQ6NWY9 871 aaKnown RBP10.86□□□□□ -0.67
GGA3-222ENST00000621217 ZNF496Q96IT1 587 aaPredicted RBP10.86□□□□□ -0.67
GGA3-222ENST00000621217 SNRKQ9NRH2 765 aa10.86□□□□□ -0.67
GGA3-222ENST00000621217 A1BGP04217 495 aa10.86□□□□□ -0.67
GGA3-222ENST00000621217 CPA1P15085 419 aa10.86□□□□□ -0.67
GGA3-222ENST00000621217 CASTP20810 708 aaKnown RBP10.86□□□□□ -0.67
GGA3-222ENST00000621217 TBC1D2BQ9UPU7 963 aa10.86□□□□□ -0.67
GGA3-222ENST00000621217 NEXMIFQ5QGS0 1516 aa10.86□□□□□ -0.67
GGA3-222ENST00000621217 NPHP4O75161 1426 aaPredicted RBP10.86□□□□□ -0.67
GGA3-222ENST00000621217 SNRPA1P09661 255 aaKnown RBP10.86□□□□□ -0.67
GGA3-222ENST00000621217 H3BQV1 296 aa10.85□□□□□ -0.67
GGA3-222ENST00000621217 IFFO2Q5TF58 517 aa10.85□□□□□ -0.67
GGA3-222ENST00000621217 PDCL3Q9H2J4 239 aa10.85□□□□□ -0.67
GGA3-222ENST00000621217 HYPKQ9NX55 129 aa10.85□□□□□ -0.67
GGA3-222ENST00000621217 IQGAP1P46940 1657 aa10.85□□□□□ -0.67
GGA3-222ENST00000621217 CCDC66A2RUB6 948 aa10.85□□□□□ -0.67
GGA3-222ENST00000621217 ZNF790Q6PG37 636 aa10.85□□□□□ -0.67
GGA3-222ENST00000621217 CCDC83Q8IWF9 413 aa10.85□□□□□ -0.67
GGA3-222ENST00000621217 USP16Q9Y5T5 823 aa10.85□□□□□ -0.67
GGA3-222ENST00000621217 PIK3C2BO00750 1634 aa10.85□□□□□ -0.67
GGA3-222ENST00000621217 LMTK2Q8IWU2 1503 aa10.85□□□□□ -0.67
GGA3-222ENST00000621217 STARD3NLO95772 234 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 IL2RBP14784 551 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 FAM184AQ8NB25 1140 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 RHPN1Q8TCX5 695 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 KIF1BPQ96EK5 621 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 CIZ1Q9ULV3 898 aaPredicted RBP10.84□□□□□ -0.67
GGA3-222ENST00000621217 PIK3R4Q99570 1358 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 PTPRMP28827 1452 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 HTATSF1O43719 755 aaKnown RBP10.84□□□□□ -0.67
GGA3-222ENST00000621217 GNL2Q13823 731 aaKnown RBP10.84□□□□□ -0.67
GGA3-222ENST00000621217 PKP1Q13835 747 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 LMTK3Q96Q04 1460 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 PROSER3Q2NL68 480 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 ARHGEF25Q86VW2 580 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 TMX3Q96JJ7 454 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 USP26Q9BXU7 913 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 MTMR7Q9Y216 660 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 ABCC4O15439 1325 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 MROH2AA6NES4 1674 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 KIAA0232Q92628 1395 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 FAM182BQ5T319 152 aa10.84□□□□□ -0.67
GGA3-222ENST00000621217 FAM135BQ49AJ0 1406 aa10.83□□□□□ -0.68
GGA3-222ENST00000621217 G3V3G9 751 aa10.83□□□□□ -0.68
GGA3-222ENST00000621217 PDE4CQ08493 712 aa10.83□□□□□ -0.68
GGA3-222ENST00000621217 DCAF8Q5TAQ9 597 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms