RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 C4AP0C0L4 1744 aa7.05□□□□□ -1.28
GTDC1-220ENST00000618778 PLSCR1O15162 318 aa7.05□□□□□ -1.28
GTDC1-220ENST00000618778 ERICH6BQ5W0A0 696 aa7.05□□□□□ -1.28
GTDC1-220ENST00000618778 SMIM5Q71RC9 77 aa7.05□□□□□ -1.28
GTDC1-220ENST00000618778 COLQQ9Y215 455 aaPredicted RBP7.05□□□□□ -1.28
GTDC1-220ENST00000618778 MRC1P22897 1456 aa7.05□□□□□ -1.28
GTDC1-220ENST00000618778 SENP3-EIF4A1A0A087X0R7 540 aa7.05□□□□□ -1.28
GTDC1-220ENST00000618778 DIAPH1O60610 1272 aaKnown RBP7.05□□□□□ -1.28
GTDC1-220ENST00000618778 ZNF530Q6P9A1 599 aaPredicted RBP7.05□□□□□ -1.28
GTDC1-220ENST00000618778 MPRIPQ6WCQ1 1025 aa7.05□□□□□ -1.28
GTDC1-220ENST00000618778 AMIGO3Q86WK7 504 aa7.05□□□□□ -1.28
GTDC1-220ENST00000618778 PALLDQ8WX93 1383 aa7.04□□□□□ -1.28
GTDC1-220ENST00000618778 U2SURPO15042 1029 aaKnown RBP7.04□□□□□ -1.28
GTDC1-220ENST00000618778 PIGBQ92521 554 aa7.04□□□□□ -1.28
GTDC1-220ENST00000618778 NUDCQ9Y266 331 aa7.04□□□□□ -1.28
GTDC1-220ENST00000618778 COL24A1Q17RW2 1714 aa7.04□□□□□ -1.28
GTDC1-220ENST00000618778 ASAP1Q9ULH1 1129 aa7.04□□□□□ -1.28
GTDC1-220ENST00000618778 MTHFSDQ2M296 383 aaKnown RBP7.03□□□□□ -1.28
GTDC1-220ENST00000618778 SPG7Q9UQ90 795 aa7.03□□□□□ -1.28
GTDC1-220ENST00000618778 NKX1-1Q15270 411 aaPredicted RBP7.02□□□□□ -1.28
GTDC1-220ENST00000618778 IFNL2Q8IZJ0 200 aa7.02□□□□□ -1.28
GTDC1-220ENST00000618778 PHACTR3Q96KR7 559 aa7.02□□□□□ -1.28
GTDC1-220ENST00000618778 RSPH6AQ9H0K4 717 aa7.02□□□□□ -1.28
GTDC1-220ENST00000618778 LGR6Q9HBX8 967 aa7.02□□□□□ -1.28
GTDC1-220ENST00000618778 KCPQ6ZWJ8 1503 aa7.02□□□□□ -1.29
GTDC1-220ENST00000618778 RNF123Q5XPI4 1314 aa7.02□□□□□ -1.29
GTDC1-220ENST00000618778 CICQ96RK0 1608 aaPredicted RBP7.02□□□□□ -1.29
GTDC1-220ENST00000618778 SEC24BO95487 1268 aa7.02□□□□□ -1.29
GTDC1-220ENST00000618778 SLC4A9Q96Q91 983 aa7.02□□□□□ -1.29
GTDC1-220ENST00000618778 PPP4R2Q9NY27 417 aa7.02□□□□□ -1.29
GTDC1-220ENST00000618778 ZNF831Q5JPB2 1677 aa7.02□□□□□ -1.29
GTDC1-220ENST00000618778 ZBTB7AO95365 584 aa7.01□□□□□ -1.29
GTDC1-220ENST00000618778 PRKAR2BP31323 418 aa7.01□□□□□ -1.29
GTDC1-220ENST00000618778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.01□□□□□ -1.29
GTDC1-220ENST00000618778 CCNL1Q9UK58 526 aaPredicted RBP7.01□□□□□ -1.29
GTDC1-220ENST00000618778 PNPLA7Q6ZV29 1317 aa7.01□□□□□ -1.29
GTDC1-220ENST00000618778 PSEN1P49768 467 aa7.01□□□□□ -1.29
GTDC1-220ENST00000618778 IRX5P78411 483 aaPredicted RBP7.01□□□□□ -1.29
GTDC1-220ENST00000618778 ITPK1Q13572 414 aa7.01□□□□□ -1.29
GTDC1-220ENST00000618778 SLC15A2Q16348 729 aa7.01□□□□□ -1.29
GTDC1-220ENST00000618778 PLEKHO1Q53GL0 409 aaPredicted RBP7.01□□□□□ -1.29
GTDC1-220ENST00000618778 LINC00116Q8NCU8 138 aa7.01□□□□□ -1.29
GTDC1-220ENST00000618778 ATG3Q9NT62 314 aa7.01□□□□□ -1.29
GTDC1-220ENST00000618778 KDM3BQ7LBC6 1761 aa7□□□□□ -1.29
GTDC1-220ENST00000618778 PDAP1Q13442 181 aaKnown RBP7□□□□□ -1.29
GTDC1-220ENST00000618778 TMOD3Q9NYL9 352 aa7□□□□□ -1.29
GTDC1-220ENST00000618778 PLEKHG2Q9H7P9 1386 aa7□□□□□ -1.29
GTDC1-220ENST00000618778 U2AF1L5P0DN76 240 aaPredicted RBP7□□□□□ -1.29
GTDC1-220ENST00000618778 U2AF1Q01081 240 aaKnown RBP eCLIP7□□□□□ -1.29
GTDC1-220ENST00000618778 SLC39A6Q13433 755 aa7□□□□□ -1.29
GTDC1-220ENST00000618778 MAP3K5Q99683 1374 aa7□□□□□ -1.29
GTDC1-220ENST00000618778 RNMTO43148 476 aaKnown RBP6.99□□□□□ -1.29
GTDC1-220ENST00000618778 DCTN1Q14203 1278 aa6.99□□□□□ -1.29
GTDC1-220ENST00000618778 C1orf141Q5JVX7 400 aa6.99□□□□□ -1.29
GTDC1-220ENST00000618778 MAMSTRQ6ZN01 415 aa6.99□□□□□ -1.29
GTDC1-220ENST00000618778 DCAF5Q96JK2 942 aa6.99□□□□□ -1.29
GTDC1-220ENST00000618778 STK32BQ9NY57 414 aa6.99□□□□□ -1.29
GTDC1-220ENST00000618778 LOC102724428A0A0B4J2F2 783 aa6.99□□□□□ -1.29
GTDC1-220ENST00000618778 SIK1P57059 783 aa6.99□□□□□ -1.29
GTDC1-220ENST00000618778 AMOTQ4VCS5 1084 aa6.99□□□□□ -1.29
GTDC1-220ENST00000618778 AKAP4Q5JQC9 854 aa6.99□□□□□ -1.29
GTDC1-220ENST00000618778 NBPF14Q5TI25 921 aa6.99□□□□□ -1.29
GTDC1-220ENST00000618778 NFATC2IPQ8NCF5 419 aa6.99□□□□□ -1.29
GTDC1-220ENST00000618778 SALL2Q9Y467 1007 aaPredicted RBP6.99□□□□□ -1.29
GTDC1-220ENST00000618778 PTGER2P43116 358 aa6.98□□□□□ -1.29
GTDC1-220ENST00000618778 SLC27A3Q5K4L6 730 aa6.98□□□□□ -1.29
GTDC1-220ENST00000618778 MSL1Q68DK7 614 aa6.98□□□□□ -1.29
GTDC1-220ENST00000618778 B4GALNT3Q6L9W6 998 aa6.98□□□□□ -1.29
GTDC1-220ENST00000618778 CFAP53Q96M91 514 aa6.98□□□□□ -1.29
GTDC1-220ENST00000618778 LAMB4A4D0S4 1761 aa6.98□□□□□ -1.29
GTDC1-220ENST00000618778 PTCD1O75127 700 aaKnown RBP6.98□□□□□ -1.29
GTDC1-220ENST00000618778 PHF14O94880 888 aa6.98□□□□□ -1.29
GTDC1-220ENST00000618778 CABP4P57796 275 aa6.98□□□□□ -1.29
GTDC1-220ENST00000618778 MCM10Q7L590 875 aa6.98□□□□□ -1.29
GTDC1-220ENST00000618778 IL17REQ8NFR9 667 aa6.98□□□□□ -1.29
GTDC1-220ENST00000618778 PLEKHF1Q96S99 279 aa6.98□□□□□ -1.29
GTDC1-220ENST00000618778 THUMPD2Q9BTF0 503 aaKnown RBP6.98□□□□□ -1.29
GTDC1-220ENST00000618778 ADAMTS8Q9UP79 889 aa6.98□□□□□ -1.29
GTDC1-220ENST00000618778 ERVV-2B6SEH9 535 aa6.97□□□□□ -1.29
GTDC1-220ENST00000618778 KCNQ3O43525 872 aa6.97□□□□□ -1.29
GTDC1-220ENST00000618778 COL23A1Q86Y22 540 aaPredicted RBP6.97□□□□□ -1.29
GTDC1-220ENST00000618778 CCDC146Q8IYE0 955 aa6.97□□□□□ -1.29
GTDC1-220ENST00000618778 SLC52A2Q9HAB3 445 aa6.97□□□□□ -1.29
GTDC1-220ENST00000618778 TFCP2L1Q9NZI6 479 aa6.97□□□□□ -1.29
GTDC1-220ENST00000618778 RBM19Q9Y4C8 960 aaKnown RBP6.97□□□□□ -1.29
GTDC1-220ENST00000618778 KIAA1551Q9HCM1 1747 aa6.97□□□□□ -1.29
GTDC1-220ENST00000618778 CEMIPQ8WUJ3 1361 aa6.97□□□□□ -1.29
GTDC1-220ENST00000618778 PLCG2P16885 1265 aa6.96□□□□□ -1.29
GTDC1-220ENST00000618778 ATP6V1AP38606 617 aa6.96□□□□□ -1.29
GTDC1-220ENST00000618778 RNF25Q96BH1 459 aaPredicted RBP6.96□□□□□ -1.29
GTDC1-220ENST00000618778 CDCA7LQ96GN5 454 aa6.96□□□□□ -1.29
GTDC1-220ENST00000618778 OCEL1Q9H607 264 aa6.96□□□□□ -1.29
GTDC1-220ENST00000618778 BCORQ6W2J9 1755 aa6.96□□□□□ -1.3
GTDC1-220ENST00000618778 SCN7AQ01118 1682 aa6.96□□□□□ -1.3
GTDC1-220ENST00000618778 AFDNP55196 1824 aaKnown RBP6.95□□□□□ -1.3
GTDC1-220ENST00000618778 PRAMEF22A3QJZ6 481 aa6.95□□□□□ -1.3
GTDC1-220ENST00000618778 HSP90AB1P08238 724 aaKnown RBP6.95□□□□□ -1.3
GTDC1-220ENST00000618778 SCUBE2Q9NQ36 999 aa6.95□□□□□ -1.3
GTDC1-220ENST00000618778 RRP7AQ9Y3A4 280 aaKnown RBP6.95□□□□□ -1.3
GTDC1-220ENST00000618778 N4BP2Q86UW6 1770 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms