RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 PTPN23Q9H3S7 1636 aa11.8□□□□□ -0.52
FAM228B-205ENST00000611127 FAM50AQ14320 339 aaKnown RBP11.8□□□□□ -0.52
FAM228B-205ENST00000611127 DZIP3Q86Y13 1208 aaKnown RBP11.8□□□□□ -0.52
FAM228B-205ENST00000611127 FBXO41Q8TF61 875 aa11.8□□□□□ -0.52
FAM228B-205ENST00000611127 KDM5DQ9BY66 1539 aa11.8□□□□□ -0.52
FAM228B-205ENST00000611127 CLTCQ00610 1675 aaKnown RBP11.79□□□□□ -0.52
FAM228B-205ENST00000611127 ZBBXA8MT70 800 aa11.79□□□□□ -0.52
FAM228B-205ENST00000611127 TMEM132AQ24JP5 1023 aa11.79□□□□□ -0.52
FAM228B-205ENST00000611127 CCDC125Q86Z20 511 aa11.79□□□□□ -0.52
FAM228B-205ENST00000611127 GJD4Q96KN9 370 aaPredicted RBP11.79□□□□□ -0.52
FAM228B-205ENST00000611127 CHIC2Q9UKJ5 165 aa11.79□□□□□ -0.52
FAM228B-205ENST00000611127 DUOX2Q9NRD8 1548 aa11.79□□□□□ -0.52
FAM228B-205ENST00000611127 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
FAM228B-205ENST00000611127 PZPP20742 1482 aa11.78□□□□□ -0.52
FAM228B-205ENST00000611127 BMP2P12643 396 aa11.78□□□□□ -0.52
FAM228B-205ENST00000611127 INTS6LQ5JSJ4 861 aaKnown RBP11.78□□□□□ -0.52
FAM228B-205ENST00000611127 Q6ZVU0 165 aa11.78□□□□□ -0.52
FAM228B-205ENST00000611127 SEPT12Q8IYM1 358 aa11.78□□□□□ -0.52
FAM228B-205ENST00000611127 TNRQ92752 1358 aa11.78□□□□□ -0.52
FAM228B-205ENST00000611127 SETD1BQ9UPS6 1966 aaKnown RBP11.78□□□□□ -0.52
FAM228B-205ENST00000611127 PTPRTO14522 1441 aa11.77□□□□□ -0.52
FAM228B-205ENST00000611127 NCOA1Q15788 1441 aa11.77□□□□□ -0.52
FAM228B-205ENST00000611127 ERBINQ96RT1 1412 aa11.77□□□□□ -0.52
FAM228B-205ENST00000611127 WIPF1O43516 503 aa11.76□□□□□ -0.53
FAM228B-205ENST00000611127 MAN1A2O60476 641 aa11.76□□□□□ -0.53
FAM228B-205ENST00000611127 MCCD1P59942 119 aaPredicted RBP11.76□□□□□ -0.53
FAM228B-205ENST00000611127 C6orf118Q5T5N4 469 aa11.76□□□□□ -0.53
FAM228B-205ENST00000611127 THEMISQ8N1K5 641 aaPredicted RBP11.75□□□□□ -0.53
FAM228B-205ENST00000611127 A2ML1A8K2U0 1454 aa11.75□□□□□ -0.53
FAM228B-205ENST00000611127 ESPNB1AK53 854 aa11.74□□□□□ -0.53
FAM228B-205ENST00000611127 IRF7Q92985 503 aa11.74□□□□□ -0.53
FAM228B-205ENST00000611127 ZNF330Q9Y3S2 320 aaPredicted RBP11.74□□□□□ -0.53
FAM228B-205ENST00000611127 NDUFB9Q9Y6M9 179 aa11.74□□□□□ -0.53
FAM228B-205ENST00000611127 KANK1Q14678 1352 aa11.74□□□□□ -0.53
FAM228B-205ENST00000611127 PLA2R1Q13018 1463 aa11.74□□□□□ -0.53
FAM228B-205ENST00000611127 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
FAM228B-205ENST00000611127 CAMSAP1Q5T5Y3 1602 aa11.74□□□□□ -0.53
FAM228B-205ENST00000611127 EIF2AK4Q9P2K8 1649 aaKnown RBP11.74□□□□□ -0.53
FAM228B-205ENST00000611127 ABCC3O15438 1527 aa11.73□□□□□ -0.53
FAM228B-205ENST00000611127 RNF17Q9BXT8 1623 aaKnown RBP11.73□□□□□ -0.53
FAM228B-205ENST00000611127 CEP170BQ9Y4F5 1589 aaPredicted RBP11.73□□□□□ -0.53
FAM228B-205ENST00000611127 NLRP1Q9C000 1473 aa11.72□□□□□ -0.53
FAM228B-205ENST00000611127 SOS2Q07890 1332 aaPredicted RBP11.72□□□□□ -0.53
FAM228B-205ENST00000611127 H3BM21 787 aa11.72□□□□□ -0.53
FAM228B-205ENST00000611127 PPARGC1BQ86YN6 1023 aaKnown RBP11.72□□□□□ -0.53
FAM228B-205ENST00000611127 STRCQ7RTU9 1775 aa11.72□□□□□ -0.53
FAM228B-205ENST00000611127 MYO3AQ8NEV4 1616 aa11.71□□□□□ -0.53
FAM228B-205ENST00000611127 INSM1Q01101 510 aaPredicted RBP11.71□□□□□ -0.53
FAM228B-205ENST00000611127 ANKLE2Q86XL3 938 aa11.71□□□□□ -0.53
FAM228B-205ENST00000611127 PRM3Q9NNZ6 103 aa11.71□□□□□ -0.53
FAM228B-205ENST00000611127 ADGRL2O95490 1459 aa11.7□□□□□ -0.54
FAM228B-205ENST00000611127 ARHGAP31Q2M1Z3 1444 aa11.7□□□□□ -0.54
FAM228B-205ENST00000611127 SPINT1O43278 529 aa11.7□□□□□ -0.54
FAM228B-205ENST00000611127 FBXO45P0C2W1 286 aa11.7□□□□□ -0.54
FAM228B-205ENST00000611127 NR1H3Q13133 447 aa11.7□□□□□ -0.54
FAM228B-205ENST00000611127 MTMR14Q8NCE2 650 aa11.7□□□□□ -0.54
FAM228B-205ENST00000611127 CROCC2H7BZ55 1655 aa11.69□□□□□ -0.54
FAM228B-205ENST00000611127 MROH1Q8NDA8 1641 aa11.69□□□□□ -0.54
FAM228B-205ENST00000611127 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.69□□□□□ -0.54
FAM228B-205ENST00000611127 ANKRD50Q9ULJ7 1429 aa11.69□□□□□ -0.54
FAM228B-205ENST00000611127 ZNF142P52746 1687 aaPredicted RBP11.68□□□□□ -0.54
FAM228B-205ENST00000611127 ZC3H13Q5T200 1668 aaKnown RBP11.68□□□□□ -0.54
FAM228B-205ENST00000611127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.68□□□□□ -0.54
FAM228B-205ENST00000611127 TTLL8A6PVC2 850 aa11.68□□□□□ -0.54
FAM228B-205ENST00000611127 CBLBQ13191 982 aa11.68□□□□□ -0.54
FAM228B-205ENST00000611127 RNF20Q5VTR2 975 aa11.68□□□□□ -0.54
FAM228B-205ENST00000611127 PCDHB9Q9Y5E1 797 aa11.68□□□□□ -0.54
FAM228B-205ENST00000611127 PRDM15P57071 1507 aaPredicted RBP11.68□□□□□ -0.54
FAM228B-205ENST00000611127 ERVK-7P63135 1459 aa11.68□□□□□ -0.54
FAM228B-205ENST00000611127 ROCK1Q13464 1354 aa11.67□□□□□ -0.54
FAM228B-205ENST00000611127 SPATA31D1Q6ZQQ2 1576 aa11.67□□□□□ -0.54
FAM228B-205ENST00000611127 UGGT1Q9NYU2 1555 aa11.67□□□□□ -0.54
FAM228B-205ENST00000611127 ERVH48-1M5A8F1 160 aa11.66□□□□□ -0.54
FAM228B-205ENST00000611127 ITGAEP38570 1179 aa11.66□□□□□ -0.54
FAM228B-205ENST00000611127 ZNF784Q8NCA9 323 aaPredicted RBP11.66□□□□□ -0.54
FAM228B-205ENST00000611127 ZNF335Q9H4Z2 1342 aaPredicted RBP11.65□□□□□ -0.54
FAM228B-205ENST00000611127 VSIG8P0DPA2 414 aa11.65□□□□□ -0.54
FAM228B-205ENST00000611127 DNMT3LQ9UJW3 386 aa11.65□□□□□ -0.54
FAM228B-205ENST00000611127 LMTK2Q8IWU2 1503 aa11.65□□□□□ -0.55
FAM228B-205ENST00000611127 ADH1AP07327 375 aa11.64□□□□□ -0.55
FAM228B-205ENST00000611127 ERICH6Q7L0X2 663 aa11.64□□□□□ -0.55
FAM228B-205ENST00000611127 DEPDC5O75140 1603 aa11.64□□□□□ -0.55
FAM228B-205ENST00000611127 SOBPA7XYQ1 873 aa11.63□□□□□ -0.55
FAM228B-205ENST00000611127 LILRA1O75019 489 aa11.63□□□□□ -0.55
FAM228B-205ENST00000611127 RAB15P59190 212 aa11.63□□□□□ -0.55
FAM228B-205ENST00000611127 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
FAM228B-205ENST00000611127 TMPRSS4Q9NRS4 437 aa11.63□□□□□ -0.55
FAM228B-205ENST00000611127 SLC52A1Q9NWF4 448 aa11.63□□□□□ -0.55
FAM228B-205ENST00000611127 LTBP4Q8N2S1 1624 aa11.63□□□□□ -0.55
FAM228B-205ENST00000611127 VWDEQ8N2E2 1590 aa11.62□□□□□ -0.55
FAM228B-205ENST00000611127 IDI1Q13907 227 aa11.62□□□□□ -0.55
FAM228B-205ENST00000611127 LCE2CQ5TA81 110 aa11.62□□□□□ -0.55
FAM228B-205ENST00000611127 TXNDC2Q86VQ3 553 aa11.62□□□□□ -0.55
FAM228B-205ENST00000611127 STK17AQ9UEE5 414 aa11.62□□□□□ -0.55
FAM228B-205ENST00000611127 EID1Q9Y6B2 187 aa11.62□□□□□ -0.55
FAM228B-205ENST00000611127 MED14O60244 1454 aa11.62□□□□□ -0.55
FAM228B-205ENST00000611127 IQSEC2Q5JU85 1478 aa11.62□□□□□ -0.55
FAM228B-205ENST00000611127 NPHP4O75161 1426 aaPredicted RBP11.61□□□□□ -0.55
FAM228B-205ENST00000611127 GPR37L1O60883 481 aa11.61□□□□□ -0.55
FAM228B-205ENST00000611127 GIGYF1O75420 1035 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms