RNA–Protein interactions for RNA: ENST00000602229.1

C3-218, Transcript of complement C3, human

TSL 2

Gene C3, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C3-218	ENST00000602229	TWISTNB	Q3B726	338 aa	Predicted RBP	13.73	□□□□□ -0.21
C3-218	ENST00000602229	ZNF790	Q6PG37	636 aa		13.73	□□□□□ -0.21
C3-218	ENST00000602229	NFATC2IP	Q8NCF5	419 aa		13.73	□□□□□ -0.21
C3-218	ENST00000602229	ASAP1	Q9ULH1	1129 aa		13.73	□□□□□ -0.21
C3-218	ENST00000602229	DLG5	Q8TDM6	1919 aa		13.72	□□□□□ -0.21
C3-218	ENST00000602229	LINC00116	Q8NCU8	138 aa		13.72	□□□□□ -0.21
C3-218	ENST00000602229	PHF14	O94880	888 aa		13.71	□□□□□ -0.21
C3-218	ENST00000602229	BRPF1	P55201	1214 aa	Predicted RBP	13.71	□□□□□ -0.21
C3-218	ENST00000602229	ITPK1	Q13572	414 aa		13.71	□□□□□ -0.21
C3-218	ENST00000602229	NLGN2	Q8NFZ4	835 aa		13.71	□□□□□ -0.21
C3-218	ENST00000602229	FMNL2	Q96PY5	1086 aa		13.71	□□□□□ -0.21
C3-218	ENST00000602229	KIF16B	Q96L93	1317 aa		13.7	□□□□□ -0.22
C3-218	ENST00000602229	VAMP4	O75379	141 aa		13.7	□□□□□ -0.22
C3-218	ENST00000602229	NEFL	P07196	543 aa		13.7	□□□□□ -0.22
C3-218	ENST00000602229	MS4A1	P11836	297 aa		13.7	□□□□□ -0.22
C3-218	ENST00000602229	YY1	P25490	414 aa		13.7	□□□□□ -0.22
C3-218	ENST00000602229	EIF4A1	P60842	406 aa	Known RBP	13.7	□□□□□ -0.22
C3-218	ENST00000602229	CCDC30	Q5VVM6	783 aa		13.7	□□□□□ -0.22
C3-218	ENST00000602229	SMARCC1	Q92922	1105 aa	Predicted RBP	13.7	□□□□□ -0.22
C3-218	ENST00000602229	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.7	□□□□□ -0.22
C3-218	ENST00000602229	VIRMA	Q69YN4	1812 aa	Known RBP	13.69	□□□□□ -0.22
C3-218	ENST00000602229	IPO8	O15397	1037 aa	Known RBP	13.69	□□□□□ -0.22
C3-218	ENST00000602229	RARS	P54136	660 aa	Known RBP	13.69	□□□□□ -0.22
C3-218	ENST00000602229	VSIG10	Q8N0Z9	540 aa		13.69	□□□□□ -0.22
C3-218	ENST00000602229	ATG3	Q9NT62	314 aa		13.69	□□□□□ -0.22
C3-218	ENST00000602229	SCN11A	Q9UI33	1791 aa		13.68	□□□□□ -0.22
C3-218	ENST00000602229	SNRPA1	P09661	255 aa	Known RBP	13.68	□□□□□ -0.22
C3-218	ENST00000602229	C8orf58	Q8NAV2	365 aa		13.68	□□□□□ -0.22
C3-218	ENST00000602229	SLC4A9	Q96Q91	983 aa		13.68	□□□□□ -0.22
C3-218	ENST00000602229	STK31	Q9BXU1	1019 aa		13.68	□□□□□ -0.22
C3-218	ENST00000602229	MIS18A	Q9NYP9	233 aa		13.68	□□□□□ -0.22
C3-218	ENST00000602229	HEG1	Q9ULI3	1381 aa		13.68	□□□□□ -0.22
C3-218	ENST00000602229	COL5A3	P25940	1745 aa	Predicted RBP	13.67	□□□□□ -0.22
C3-218	ENST00000602229	RNF123	Q5XPI4	1314 aa		13.67	□□□□□ -0.22
C3-218	ENST00000602229	LOC102724428	A0A0B4J2F2	783 aa		13.67	□□□□□ -0.22
C3-218	ENST00000602229	SIK1	P57059	783 aa		13.67	□□□□□ -0.22
C3-218	ENST00000602229	PELP1	Q8IZL8	1130 aa	Known RBP	13.67	□□□□□ -0.22
C3-218	ENST00000602229	AK7	Q96M32	723 aa		13.67	□□□□□ -0.22
C3-218	ENST00000602229	SMC4	Q9NTJ3	1288 aa		13.67	□□□□□ -0.22
C3-218	ENST00000602229	GIGYF1	O75420	1035 aa	Predicted RBP	13.66	□□□□□ -0.22
C3-218	ENST00000602229	POLD1	P28340	1107 aa		13.66	□□□□□ -0.22
C3-218	ENST00000602229	WWC3	Q9ULE0	1092 aa		13.66	□□□□□ -0.22
C3-218	ENST00000602229	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.66	□□□□□ -0.22
C3-218	ENST00000602229	TJP1	Q07157	1748 aa		13.66	□□□□□ -0.22
C3-218	ENST00000602229	ERBB4	Q15303	1308 aa		13.65	□□□□□ -0.22
C3-218	ENST00000602229	ATP6V1A	P38606	617 aa		13.65	□□□□□ -0.22
C3-218	ENST00000602229	HDGFL1	Q5TGJ6	251 aa		13.65	□□□□□ -0.22
C3-218	ENST00000602229	ERICH6B	Q5W0A0	696 aa		13.65	□□□□□ -0.22
C3-218	ENST00000602229	SLC16A10	Q8TF71	515 aa		13.65	□□□□□ -0.22
C3-218	ENST00000602229	ARHGAP45	Q92619	1136 aa		13.65	□□□□□ -0.22
C3-218	ENST00000602229	RBM42	Q9BTD8	480 aa	Known RBP	13.65	□□□□□ -0.22
C3-218	ENST00000602229	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.64	□□□□□ -0.23
C3-218	ENST00000602229	GNPAT	O15228	680 aa		13.64	□□□□□ -0.23
C3-218	ENST00000602229	CANX	P27824	592 aa	Known RBP	13.64	□□□□□ -0.23
C3-218	ENST00000602229	RRP1	P56182	461 aa	Known RBP	13.64	□□□□□ -0.23
C3-218	ENST00000602229	PDE3A	Q14432	1141 aa		13.64	□□□□□ -0.23
C3-218	ENST00000602229	TSPYL6	Q8N831	410 aa		13.64	□□□□□ -0.23
C3-218	ENST00000602229	ZNF496	Q96IT1	587 aa	Predicted RBP	13.64	□□□□□ -0.23
C3-218	ENST00000602229	DBF4	Q9UBU7	674 aa	Predicted RBP	13.64	□□□□□ -0.23
C3-218	ENST00000602229	C4A	P0C0L4	1744 aa		13.64	□□□□□ -0.23
C3-218	ENST00000602229	PTPRC	P08575	1304 aa		13.64	□□□□□ -0.23
C3-218	ENST00000602229	MYH14	Q7Z406	1995 aa	Known RBP	13.63	□□□□□ -0.23
C3-218	ENST00000602229	DCAF8L1	A6NGE4	600 aa		13.63	□□□□□ -0.23
C3-218	ENST00000602229	ELL2	O00472	640 aa	Predicted RBP	13.63	□□□□□ -0.23
C3-218	ENST00000602229	STARD3NL	O95772	234 aa		13.63	□□□□□ -0.23
C3-218	ENST00000602229	SLC39A6	Q13433	755 aa		13.63	□□□□□ -0.23
C3-218	ENST00000602229	SSH1	Q8WYL5	1049 aa		13.63	□□□□□ -0.23
C3-218	ENST00000602229	PTCD1	O75127	700 aa	Known RBP	13.62	□□□□□ -0.23
C3-218	ENST00000602229	ZKSCAN2	Q63HK3	967 aa		13.62	□□□□□ -0.23
C3-218	ENST00000602229	API5	Q9BZZ5	524 aa	Known RBP	13.62	□□□□□ -0.23
C3-218	ENST00000602229	CHMP4B	Q9H444	224 aa	Known RBP	13.62	□□□□□ -0.23
C3-218	ENST00000602229	HYPK	Q9NX55	129 aa		13.62	□□□□□ -0.23
C3-218	ENST00000602229	SIPA1L3	O60292	1781 aa	Predicted RBP	13.62	□□□□□ -0.23
C3-218	ENST00000602229	KDM3B	Q7LBC6	1761 aa		13.62	□□□□□ -0.23
C3-218	ENST00000602229	CHD4	Q14839	1912 aa		13.62	□□□□□ -0.23
C3-218	ENST00000602229	KCNQ3	O43525	872 aa		13.61	□□□□□ -0.23
C3-218	ENST00000602229	YBX3	P16989	372 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
C3-218	ENST00000602229	AAMP	Q13685	434 aa		13.61	□□□□□ -0.23
C3-218	ENST00000602229	GPR162	Q16538	588 aa		13.61	□□□□□ -0.23
C3-218	ENST00000602229	ZNF831	Q5JPB2	1677 aa		13.6	□□□□□ -0.23
C3-218	ENST00000602229	BCAR3	O75815	825 aa		13.6	□□□□□ -0.23
C3-218	ENST00000602229	SLC4A2	P04920	1241 aa		13.6	□□□□□ -0.23
C3-218	ENST00000602229	MRPL50	Q8N5N7	158 aa	Known RBP	13.6	□□□□□ -0.23
C3-218	ENST00000602229	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
C3-218	ENST00000602229	DDX58	O95786	925 aa	Known RBP	13.59	□□□□□ -0.23
C3-218	ENST00000602229	EIF2S2	P20042	333 aa	Known RBP	13.59	□□□□□ -0.23
C3-218	ENST00000602229	KRT24	Q2M2I5	525 aa		13.59	□□□□□ -0.23
C3-218	ENST00000602229	ATF7IP	Q6VMQ6	1270 aa		13.59	□□□□□ -0.23
C3-218	ENST00000602229	KIAA1551	Q9HCM1	1747 aa		13.59	□□□□□ -0.23
C3-218	ENST00000602229	CIC	Q96RK0	1608 aa	Predicted RBP	13.58	□□□□□ -0.24
C3-218	ENST00000602229	UTRN	P46939	3433 aa		13.58	□□□□□ -0.24
C3-218	ENST00000602229	SSFA2	P28290	1259 aa		13.58	□□□□□ -0.24
C3-218	ENST00000602229	NPM2	Q86SE8	214 aa	Known RBP	13.58	□□□□□ -0.24
C3-218	ENST00000602229	FTSJ3	Q8IY81	847 aa	Known RBP	13.58	□□□□□ -0.24
C3-218	ENST00000602229	FRAT1	Q92837	279 aa	Predicted RBP	13.58	□□□□□ -0.24
C3-218	ENST00000602229	KCP	Q6ZWJ8	1503 aa		13.58	□□□□□ -0.24
C3-218	ENST00000602229	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.58	□□□□□ -0.24
C3-218	ENST00000602229	DZIP1L	Q8IYY4	767 aa	Known RBP	13.57	□□□□□ -0.24
C3-218	ENST00000602229	FLAD1	Q8NFF5	587 aa		13.57	□□□□□ -0.24
C3-218	ENST00000602229	BCL2L13	Q9BXK5	485 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms