RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 NALCNQ8IZF0 1738 aa18.5■□□□□ 0.55
SAFB-205ENST00000588852 CWC27Q6UX04 472 aaKnown RBP18.5■□□□□ 0.55
SAFB-205ENST00000588852 R3HCC1Q9Y3T6 440 aaKnown RBP18.5■□□□□ 0.55
SAFB-205ENST00000588852 TTC21AQ8NDW8 1320 aa18.5■□□□□ 0.55
SAFB-205ENST00000588852 USP48Q86UV5 1035 aa18.5■□□□□ 0.55
SAFB-205ENST00000588852 CHPF2Q9P2E5 772 aa18.5■□□□□ 0.55
SAFB-205ENST00000588852 TOPAZ1Q8N9V7 1692 aa18.49■□□□□ 0.55
SAFB-205ENST00000588852 RBM10P98175 930 aaKnown RBP18.49■□□□□ 0.55
SAFB-205ENST00000588852 PI4K2BQ8TCG2 481 aa18.49■□□□□ 0.55
SAFB-205ENST00000588852 RHPN1Q8TCX5 695 aa18.49■□□□□ 0.55
SAFB-205ENST00000588852 PI4KAP2A4QPH2 592 aa18.49■□□□□ 0.55
SAFB-205ENST00000588852 PI4KAP1Q8N8J0 262 aa18.49■□□□□ 0.55
SAFB-205ENST00000588852 SSH3Q8TE77 659 aa18.49■□□□□ 0.55
SAFB-205ENST00000588852 TCHHQ07283 1943 aa18.48■□□□□ 0.55
SAFB-205ENST00000588852 OFD1O75665 1012 aa18.48■□□□□ 0.55
SAFB-205ENST00000588852 NOL7Q9UMY1 257 aaKnown RBP18.48■□□□□ 0.55
SAFB-205ENST00000588852 PLEKHG1Q9ULL1 1385 aa18.48■□□□□ 0.55
SAFB-205ENST00000588852 HSPA4P34932 840 aa18.47■□□□□ 0.55
SAFB-205ENST00000588852 EID1Q9Y6B2 187 aa18.47■□□□□ 0.55
SAFB-205ENST00000588852 MAP3K5Q99683 1374 aa18.47■□□□□ 0.55
SAFB-205ENST00000588852 SRCIN1Q9C0H9 1055 aa18.47■□□□□ 0.55
SAFB-205ENST00000588852 CNPY2Q9Y2B0 182 aa18.47■□□□□ 0.55
SAFB-205ENST00000588852 FMN2Q9NZ56 1722 aa18.46■□□□□ 0.55
SAFB-205ENST00000588852 MCM2P49736 904 aa18.46■□□□□ 0.55
SAFB-205ENST00000588852 SNX14Q9Y5W7 946 aa18.46■□□□□ 0.55
SAFB-205ENST00000588852 XRN1Q8IZH2 1706 aaKnown RBP18.46■□□□□ 0.55
SAFB-205ENST00000588852 KCNA6P17658 529 aa18.46■□□□□ 0.55
SAFB-205ENST00000588852 ANAPC15P60006 121 aa18.46■□□□□ 0.55
SAFB-205ENST00000588852 COL9A3Q14050 684 aaPredicted RBP18.46■□□□□ 0.55
SAFB-205ENST00000588852 TUBGCP6Q96RT7 1819 aa18.46■□□□□ 0.54
SAFB-205ENST00000588852 LARGE1O95461 756 aa18.45■□□□□ 0.54
SAFB-205ENST00000588852 AK2P54819 239 aa18.45■□□□□ 0.54
SAFB-205ENST00000588852 NBPF6Q5VWK0 638 aa18.45■□□□□ 0.54
SAFB-205ENST00000588852 LRRC59Q96AG4 307 aaKnown RBP18.45■□□□□ 0.54
SAFB-205ENST00000588852 INTS4Q96HW7 963 aaKnown RBP18.45■□□□□ 0.54
SAFB-205ENST00000588852 NBPF4Q96M43 638 aa18.45■□□□□ 0.54
SAFB-205ENST00000588852 ZNF830Q96NB3 372 aaPredicted RBP18.45■□□□□ 0.54
SAFB-205ENST00000588852 PA2G4Q9UQ80 394 aaKnown RBP18.45■□□□□ 0.54
SAFB-205ENST00000588852 PIK3C2AO00443 1686 aa18.44■□□□□ 0.54
SAFB-205ENST00000588852 SGSM2O43147 1006 aa18.44■□□□□ 0.54
SAFB-205ENST00000588852 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.44■□□□□ 0.54
SAFB-205ENST00000588852 PRAMEF22A3QJZ6 481 aa18.44■□□□□ 0.54
SAFB-205ENST00000588852 HTATSF1O43719 755 aaKnown RBP18.44■□□□□ 0.54
SAFB-205ENST00000588852 MBD3O95983 291 aa18.44■□□□□ 0.54
SAFB-205ENST00000588852 MPRIPQ6WCQ1 1025 aa18.44■□□□□ 0.54
SAFB-205ENST00000588852 RUFY3Q7L099 469 aa18.44■□□□□ 0.54
SAFB-205ENST00000588852 LSG1Q9H089 658 aaKnown RBP18.43■□□□□ 0.54
SAFB-205ENST00000588852 FAM208AQ9UK61 1670 aaKnown RBP18.43■□□□□ 0.54
SAFB-205ENST00000588852 RPAP1Q9BWH6 1393 aaPredicted RBP18.43■□□□□ 0.54
SAFB-205ENST00000588852 POLA2Q14181 598 aa18.43■□□□□ 0.54
SAFB-205ENST00000588852 ADCK5Q3MIX3 580 aa18.43■□□□□ 0.54
SAFB-205ENST00000588852 VSIG10Q8N0Z9 540 aa18.43■□□□□ 0.54
SAFB-205ENST00000588852 PKNOX2Q96KN3 472 aa18.43■□□□□ 0.54
SAFB-205ENST00000588852 RRP9O43818 475 aaKnown RBP18.42■□□□□ 0.54
SAFB-205ENST00000588852 PTH1RQ03431 593 aa18.42■□□□□ 0.54
SAFB-205ENST00000588852 OS9Q13438 667 aaPredicted RBP18.42■□□□□ 0.54
SAFB-205ENST00000588852 TSPY26PQ9H489 355 aa18.42■□□□□ 0.54
SAFB-205ENST00000588852 ZKSCAN5Q9Y2L8 839 aa18.42■□□□□ 0.54
SAFB-205ENST00000588852 EIF4A1P60842 406 aaKnown RBP18.42■□□□□ 0.54
SAFB-205ENST00000588852 BEND3Q5T5X7 828 aa18.42■□□□□ 0.54
SAFB-205ENST00000588852 NWD1Q149M9 1564 aa18.42■□□□□ 0.54
SAFB-205ENST00000588852 PROSER3Q2NL68 480 aa18.41■□□□□ 0.54
SAFB-205ENST00000588852 RAD50Q92878 1312 aa18.41■□□□□ 0.54
SAFB-205ENST00000588852 ARID3AQ99856 593 aa18.41■□□□□ 0.54
SAFB-205ENST00000588852 CASTP20810 708 aaKnown RBP18.41■□□□□ 0.54
SAFB-205ENST00000588852 FIBPO43427 364 aa18.41■□□□□ 0.54
SAFB-205ENST00000588852 SYT1P21579 422 aa18.41■□□□□ 0.54
SAFB-205ENST00000588852 DNAAF4Q8WXU2 420 aa18.41■□□□□ 0.54
SAFB-205ENST00000588852 TTC14Q96N46 770 aa18.41■□□□□ 0.54
SAFB-205ENST00000588852 CWF19L2Q2TBE0 894 aaKnown RBP18.4■□□□□ 0.54
SAFB-205ENST00000588852 KIF1BPQ96EK5 621 aa18.4■□□□□ 0.54
SAFB-205ENST00000588852 WDR33Q9C0J8 1336 aaKnown RBP18.4■□□□□ 0.54
SAFB-205ENST00000588852 TPM2P07951 284 aa18.4■□□□□ 0.54
SAFB-205ENST00000588852 JARID2Q92833 1246 aaPredicted RBP18.4■□□□□ 0.54
SAFB-205ENST00000588852 DIP2AQ14689 1571 aa18.4■□□□□ 0.54
SAFB-205ENST00000588852 PTMAP06454 111 aaKnown RBP18.39■□□□□ 0.53
SAFB-205ENST00000588852 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.39■□□□□ 0.53
SAFB-205ENST00000588852 CCDC83Q8IWF9 413 aa18.39■□□□□ 0.53
SAFB-205ENST00000588852 FAM13BQ9NYF5 915 aa18.39■□□□□ 0.53
SAFB-205ENST00000588852 USP25Q9UHP3 1055 aa18.39■□□□□ 0.53
SAFB-205ENST00000588852 ZNF500O60304 480 aaPredicted RBP18.39■□□□□ 0.53
SAFB-205ENST00000588852 GLIPR1L2Q4G1C9 344 aa18.39■□□□□ 0.53
SAFB-205ENST00000588852 C17orf53Q8N3J3 647 aaPredicted RBP18.39■□□□□ 0.53
SAFB-205ENST00000588852 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
SAFB-205ENST00000588852 RAB11FIP3O75154 756 aa18.38■□□□□ 0.53
SAFB-205ENST00000588852 PRPF40BQ6NWY9 871 aaKnown RBP18.38■□□□□ 0.53
SAFB-205ENST00000588852 CNTROBQ8N137 903 aa18.38■□□□□ 0.53
SAFB-205ENST00000588852 HCLS1P14317 486 aaPredicted RBP18.38■□□□□ 0.53
SAFB-205ENST00000588852 HS1BP3Q53T59 392 aa18.38■□□□□ 0.53
SAFB-205ENST00000588852 NECAB1Q8N987 351 aa18.38■□□□□ 0.53
SAFB-205ENST00000588852 TCEANC2Q96MN5 208 aa18.38■□□□□ 0.53
SAFB-205ENST00000588852 BTBD11A6QL63 1104 aa18.37■□□□□ 0.53
SAFB-205ENST00000588852 STX6O43752 255 aa18.37■□□□□ 0.53
SAFB-205ENST00000588852 PLCB2Q00722 1185 aa18.37■□□□□ 0.53
SAFB-205ENST00000588852 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
SAFB-205ENST00000588852 ZSCAN22P10073 491 aaPredicted RBP18.36■□□□□ 0.53
SAFB-205ENST00000588852 JAKMIP1Q96N16 626 aaKnown RBP18.36■□□□□ 0.53
SAFB-205ENST00000588852 ADCY9O60503 1353 aa18.36■□□□□ 0.53
SAFB-205ENST00000588852 LRRC37A3O60309 1634 aa18.36■□□□□ 0.53
SAFB-205ENST00000588852 ZMYND15Q9H091 742 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms