RNA–Protein interactions for RNA: ENST00000586869.5

NLE1-203, Transcript of notchless homolog 1, humanhuman

TSL 1 (best) BASIC

Gene NLE1, Length 5,286 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-203ENST00000586869 ZKSCAN5Q9Y2L8 839 aa20.95■□□□□ 0.94
NLE1-203ENST00000586869 ZSCAN25Q6NSZ9 544 aa20.94■□□□□ 0.94
NLE1-203ENST00000586869 LARP6Q9BRS8 491 aaKnown RBP20.94■□□□□ 0.94
NLE1-203ENST00000586869 ZFYVE9O95405 1425 aa20.94■□□□□ 0.94
NLE1-203ENST00000586869 FKBP4Q02790 459 aaKnown RBP eCLIP20.94■□□□□ 0.94
NLE1-203ENST00000586869 U3KPZ7 1027 aaPredicted RBP20.94■□□□□ 0.94
NLE1-203ENST00000586869 PRIM1P49642 420 aaKnown RBP20.94■□□□□ 0.94
NLE1-203ENST00000586869 CCDC57Q2TAC2 916 aa20.93■□□□□ 0.94
NLE1-203ENST00000586869 CEP85Q6P2H3 762 aa20.93■□□□□ 0.94
NLE1-203ENST00000586869 CKAP2LQ8IYA6 745 aa20.93■□□□□ 0.94
NLE1-203ENST00000586869 CEP89Q96ST8 783 aa20.93■□□□□ 0.94
NLE1-203ENST00000586869 RUFY1Q96T51 708 aa20.93■□□□□ 0.94
NLE1-203ENST00000586869 CLIP2Q9UDT6 1046 aa20.93■□□□□ 0.94
NLE1-203ENST00000586869 A0A1W2PP64 1363 aa20.93■□□□□ 0.94
NLE1-203ENST00000586869 HMGB1P09429 215 aaKnown RBP20.93■□□□□ 0.94
NLE1-203ENST00000586869 HCLS1P14317 486 aaPredicted RBP20.93■□□□□ 0.94
NLE1-203ENST00000586869 VPS53Q5VIR6 699 aa20.93■□□□□ 0.94
NLE1-203ENST00000586869 AMOTQ4VCS5 1084 aa20.93■□□□□ 0.94
NLE1-203ENST00000586869 RHPN1Q8TCX5 695 aa20.93■□□□□ 0.94
NLE1-203ENST00000586869 CCDC8Q9H0W5 538 aaPredicted RBP20.92■□□□□ 0.94
NLE1-203ENST00000586869 CNNM1Q9NRU3 951 aa20.92■□□□□ 0.94
NLE1-203ENST00000586869 ZMYM3Q14202 1370 aa20.92■□□□□ 0.94
NLE1-203ENST00000586869 USP26Q9BXU7 913 aa20.92■□□□□ 0.94
NLE1-203ENST00000586869 RRP12Q5JTH9 1297 aaKnown RBP20.92■□□□□ 0.94
NLE1-203ENST00000586869 NUTM2BA6NNL0 878 aaPredicted RBP20.92■□□□□ 0.94
NLE1-203ENST00000586869 NUTM2EB1AL46 878 aaPredicted RBP20.92■□□□□ 0.94
NLE1-203ENST00000586869 NUTM2AQ8IVF1 878 aaPredicted RBP20.92■□□□□ 0.94
NLE1-203ENST00000586869 PPFIBP1Q86W92 1011 aa20.91■□□□□ 0.94
NLE1-203ENST00000586869 NEMFO60524 1076 aa20.91■□□□□ 0.94
NLE1-203ENST00000586869 PIP4K2BP78356 416 aa20.91■□□□□ 0.94
NLE1-203ENST00000586869 ATP8B2P98198 1209 aa20.91■□□□□ 0.94
NLE1-203ENST00000586869 TTLL5Q6EMB2 1281 aa20.91■□□□□ 0.94
NLE1-203ENST00000586869 RRAGDQ9NQL2 400 aaPredicted RBP20.91■□□□□ 0.94
NLE1-203ENST00000586869 SFPQP23246 707 aaKnown RBP eCLIP20.91■□□□□ 0.94
NLE1-203ENST00000586869 IMMTQ16891 758 aaKnown RBP20.91■□□□□ 0.94
NLE1-203ENST00000586869 USP48Q86UV5 1035 aa20.91■□□□□ 0.94
NLE1-203ENST00000586869 KIF18AQ8NI77 898 aa20.9■□□□□ 0.94
NLE1-203ENST00000586869 PHACTR3Q96KR7 559 aa20.9■□□□□ 0.94
NLE1-203ENST00000586869 CAVIN2O95810 425 aa20.9■□□□□ 0.94
NLE1-203ENST00000586869 TNNT1P13805 278 aa20.9■□□□□ 0.94
NLE1-203ENST00000586869 HYPKQ9NX55 129 aa20.9■□□□□ 0.94
NLE1-203ENST00000586869 USHBP1Q8N6Y0 703 aa20.89■□□□□ 0.94
NLE1-203ENST00000586869 CAGE1Q8TC20 777 aa20.89■□□□□ 0.94
NLE1-203ENST00000586869 NACAP1Q9BZK3 213 aa20.89■□□□□ 0.94
NLE1-203ENST00000586869 ACEP12821 1306 aa20.89■□□□□ 0.93
NLE1-203ENST00000586869 OFD1O75665 1012 aa20.89■□□□□ 0.93
NLE1-203ENST00000586869 TXLNAP40222 546 aa20.89■□□□□ 0.93
NLE1-203ENST00000586869 PBRM1Q86U86 1689 aa20.89■□□□□ 0.93
NLE1-203ENST00000586869 CCDC69A6NI79 296 aa20.89■□□□□ 0.93
NLE1-203ENST00000586869 BRPF1P55201 1214 aaPredicted RBP20.89■□□□□ 0.93
NLE1-203ENST00000586869 CBX1P83916 185 aa20.89■□□□□ 0.93
NLE1-203ENST00000586869 ZNF518AQ6AHZ1 1483 aa20.89■□□□□ 0.93
NLE1-203ENST00000586869 ZGPATQ8N5A5 531 aaKnown RBP20.89■□□□□ 0.93
NLE1-203ENST00000586869 INTS4Q96HW7 963 aaKnown RBP20.89■□□□□ 0.93
NLE1-203ENST00000586869 TFIP11Q9UBB9 837 aaKnown RBP20.88■□□□□ 0.93
NLE1-203ENST00000586869 UBXN4Q92575 508 aa20.88■□□□□ 0.93
NLE1-203ENST00000586869 HSP90AB2PQ58FF8 381 aa20.88■□□□□ 0.93
NLE1-203ENST00000586869 TRMT2AQ8IZ69 625 aaKnown RBP20.88■□□□□ 0.93
NLE1-203ENST00000586869 TRIM35Q9UPQ4 493 aa20.88■□□□□ 0.93
NLE1-203ENST00000586869 PI4KAP2A4QPH2 592 aa20.88■□□□□ 0.93
NLE1-203ENST00000586869 GIMAP6Q6P9H5 292 aa20.88■□□□□ 0.93
NLE1-203ENST00000586869 PI4KAP1Q8N8J0 262 aa20.88■□□□□ 0.93
NLE1-203ENST00000586869 ZNF165P49910 485 aa20.87■□□□□ 0.93
NLE1-203ENST00000586869 NAP1L1P55209 391 aaKnown RBP20.87■□□□□ 0.93
NLE1-203ENST00000586869 FAM177A1Q8N128 213 aaPredicted RBP20.87■□□□□ 0.93
NLE1-203ENST00000586869 RBM33Q96EV2 1170 aaKnown RBP20.87■□□□□ 0.93
NLE1-203ENST00000586869 CNPY2Q9Y2B0 182 aa20.87■□□□□ 0.93
NLE1-203ENST00000586869 PPIP5K1Q6PFW1 1433 aa20.87■□□□□ 0.93
NLE1-203ENST00000586869 HMG20BQ9P0W2 317 aa20.87■□□□□ 0.93
NLE1-203ENST00000586869 C16orf45Q96MC5 204 aaPredicted RBP20.87■□□□□ 0.93
NLE1-203ENST00000586869 CFAP100Q494V2 611 aa20.86■□□□□ 0.93
NLE1-203ENST00000586869 NOLC1Q14978 699 aaKnown RBP eCLIP20.86■□□□□ 0.93
NLE1-203ENST00000586869 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
NLE1-203ENST00000586869 CGNQ9P2M7 1197 aaKnown RBP20.86■□□□□ 0.93
NLE1-203ENST00000586869 MYD88Q99836 296 aa20.86■□□□□ 0.93
NLE1-203ENST00000586869 MAGEC2Q9UBF1 373 aaPredicted RBP20.85■□□□□ 0.93
NLE1-203ENST00000586869 EIF4G3O43432 1585 aaKnown RBP20.85■□□□□ 0.93
NLE1-203ENST00000586869 LEKR1Q6ZMV7 388 aa20.85■□□□□ 0.93
NLE1-203ENST00000586869 ERLIN1O75477 346 aa20.85■□□□□ 0.93
NLE1-203ENST00000586869 MPRIPQ6WCQ1 1025 aa20.85■□□□□ 0.93
NLE1-203ENST00000586869 AMOTL2Q9Y2J4 779 aa20.85■□□□□ 0.93
NLE1-203ENST00000586869 PTPRTO14522 1441 aa20.85■□□□□ 0.93
NLE1-203ENST00000586869 WASF1Q92558 559 aa20.84■□□□□ 0.93
NLE1-203ENST00000586869 MAP3K2Q9Y2U5 619 aa20.84■□□□□ 0.93
NLE1-203ENST00000586869 STX1AQ16623 288 aa20.84■□□□□ 0.93
NLE1-203ENST00000586869 C8orf76Q96K31 380 aa20.84■□□□□ 0.93
NLE1-203ENST00000586869 F13A1P00488 732 aa20.84■□□□□ 0.93
NLE1-203ENST00000586869 PRDM10Q9NQV6 1147 aa20.84■□□□□ 0.93
NLE1-203ENST00000586869 GSDMDP57764 484 aa20.84■□□□□ 0.93
NLE1-203ENST00000586869 ZNF521Q96K83 1311 aa20.84■□□□□ 0.93
NLE1-203ENST00000586869 WDR7Q9Y4E6 1490 aa20.83■□□□□ 0.93
NLE1-203ENST00000586869 MAGI2Q86UL8 1455 aa20.83■□□□□ 0.93
NLE1-203ENST00000586869 ABCC2Q92887 1545 aa20.83■□□□□ 0.93
NLE1-203ENST00000586869 TOM1L2Q6ZVM7 507 aa20.83■□□□□ 0.92
NLE1-203ENST00000586869 PRDM11Q9NQV5 511 aa20.83■□□□□ 0.92
NLE1-203ENST00000586869 FSIP1Q8NA03 581 aa20.82■□□□□ 0.92
NLE1-203ENST00000586869 FAM200AQ8TCP9 573 aa20.82■□□□□ 0.92
NLE1-203ENST00000586869 ARHGEF5Q12774 1597 aa20.82■□□□□ 0.92
NLE1-203ENST00000586869 SLC3A2P08195 630 aaKnown RBP20.82■□□□□ 0.92
NLE1-203ENST00000586869 IFIT1P09914 478 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms