RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 PNPLA7Q6ZV29 1317 aa19.85■□□□□ 0.77
EDC3-206ENST00000563009 STARD3NLO95772 234 aa19.85■□□□□ 0.77
EDC3-206ENST00000563009 PRAMEF22A3QJZ6 481 aa19.84■□□□□ 0.77
EDC3-206ENST00000563009 GNPATO15228 680 aa19.84■□□□□ 0.77
EDC3-206ENST00000563009 AMIGO3Q86WK7 504 aa19.84■□□□□ 0.77
EDC3-206ENST00000563009 CCDC87Q9NVE4 849 aa19.84■□□□□ 0.77
EDC3-206ENST00000563009 USP16Q9Y5T5 823 aa19.84■□□□□ 0.77
EDC3-206ENST00000563009 SSFA2P28290 1259 aa19.83■□□□□ 0.77
EDC3-206ENST00000563009 RPS6KA4O75676 772 aa19.82■□□□□ 0.76
EDC3-206ENST00000563009 FLAD1Q8NFF5 587 aa19.82■□□□□ 0.76
EDC3-206ENST00000563009 PDGFDQ9GZP0 370 aaPredicted RBP19.82■□□□□ 0.76
EDC3-206ENST00000563009 RTCBQ9Y3I0 505 aaKnown RBP19.82■□□□□ 0.76
EDC3-206ENST00000563009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.81■□□□□ 0.76
EDC3-206ENST00000563009 ZBTB1Q9Y2K1 713 aa19.81■□□□□ 0.76
EDC3-206ENST00000563009 ADRA2BP18089 450 aa19.8■□□□□ 0.76
EDC3-206ENST00000563009 KRT24Q2M2I5 525 aa19.8■□□□□ 0.76
EDC3-206ENST00000563009 COL23A1Q86Y22 540 aaPredicted RBP19.8■□□□□ 0.76
EDC3-206ENST00000563009 SPINK5Q9NQ38 1064 aaPredicted RBP19.8■□□□□ 0.76
EDC3-206ENST00000563009 SOS1Q07889 1333 aaPredicted RBP19.79■□□□□ 0.76
EDC3-206ENST00000563009 HOXB7P09629 217 aa19.79■□□□□ 0.76
EDC3-206ENST00000563009 SMIM5Q71RC9 77 aa19.79■□□□□ 0.76
EDC3-206ENST00000563009 TSR2Q969E8 191 aaKnown RBP19.79■□□□□ 0.76
EDC3-206ENST00000563009 FANCIQ9NVI1 1328 aa19.78■□□□□ 0.76
EDC3-206ENST00000563009 PHF14O94880 888 aa19.78■□□□□ 0.76
EDC3-206ENST00000563009 A1BGP04217 495 aa19.78■□□□□ 0.76
EDC3-206ENST00000563009 C4AP0C0L4 1744 aa19.78■□□□□ 0.76
EDC3-206ENST00000563009 EIF5P55010 431 aaKnown RBP19.77■□□□□ 0.76
EDC3-206ENST00000563009 GOLGA2Q08379 1002 aa19.77■□□□□ 0.76
EDC3-206ENST00000563009 TRAPPC3LQ5T215 181 aa19.77■□□□□ 0.76
EDC3-206ENST00000563009 SLC16A10Q8TF71 515 aa19.77■□□□□ 0.76
EDC3-206ENST00000563009 MYH16Q9H6N6 1097 aa19.77■□□□□ 0.76
EDC3-206ENST00000563009 CANXP27824 592 aaKnown RBP19.76■□□□□ 0.75
EDC3-206ENST00000563009 IL6STP40189 918 aaPredicted RBP19.76■□□□□ 0.75
EDC3-206ENST00000563009 DUSP27Q5VZP5 1158 aa19.76■□□□□ 0.75
EDC3-206ENST00000563009 ARHGEF1Q92888 912 aaKnown RBP19.76■□□□□ 0.75
EDC3-206ENST00000563009 ERBB4Q15303 1308 aa19.76■□□□□ 0.75
EDC3-206ENST00000563009 COL15A1P39059 1388 aa19.75■□□□□ 0.75
EDC3-206ENST00000563009 NBPF26B4DH59 902 aa19.75■□□□□ 0.75
EDC3-206ENST00000563009 HNRNPUQ00839 825 aaKnown RBP eCLIP19.75■□□□□ 0.75
EDC3-206ENST00000563009 NBPF10Q6P3W6 841 aaKnown RBP19.75■□□□□ 0.75
EDC3-206ENST00000563009 NBPF15Q8N660 670 aa19.75■□□□□ 0.75
EDC3-206ENST00000563009 C8orf58Q8NAV2 365 aa19.75■□□□□ 0.75
EDC3-206ENST00000563009 COL24A1Q17RW2 1714 aa19.75■□□□□ 0.75
EDC3-206ENST00000563009 E9PSI1 815 aa19.74■□□□□ 0.75
EDC3-206ENST00000563009 SLFN5Q08AF3 891 aa19.73■□□□□ 0.75
EDC3-206ENST00000563009 MTFR1LQ9H019 292 aa19.73■□□□□ 0.75
EDC3-206ENST00000563009 MSH5O43196 834 aa19.72■□□□□ 0.75
EDC3-206ENST00000563009 ZBTB7AO95365 584 aa19.72■□□□□ 0.75
EDC3-206ENST00000563009 EIF2S2P20042 333 aaKnown RBP19.72■□□□□ 0.75
EDC3-206ENST00000563009 RFC4P35249 363 aa19.72■□□□□ 0.75
EDC3-206ENST00000563009 PIP4K2AP48426 406 aaPredicted RBP19.72■□□□□ 0.75
EDC3-206ENST00000563009 TSPYL6Q8N831 410 aa19.72■□□□□ 0.75
EDC3-206ENST00000563009 USP42Q9H9J4 1324 aaKnown RBP19.72■□□□□ 0.75
EDC3-206ENST00000563009 A0A087WZG4 1122 aa19.71■□□□□ 0.75
EDC3-206ENST00000563009 PDIA6Q15084 440 aa19.71■□□□□ 0.75
EDC3-206ENST00000563009 HDGFL1Q5TGJ6 251 aa19.71■□□□□ 0.75
EDC3-206ENST00000563009 LRP10Q7Z4F1 713 aa19.71■□□□□ 0.75
EDC3-206ENST00000563009 TRMT2AQ8IZ69 625 aaKnown RBP19.71■□□□□ 0.75
EDC3-206ENST00000563009 CDCA7LQ96GN5 454 aa19.71■□□□□ 0.75
EDC3-206ENST00000563009 ELL2O00472 640 aaPredicted RBP19.7■□□□□ 0.74
EDC3-206ENST00000563009 NARFQ9UHQ1 456 aa19.7■□□□□ 0.74
EDC3-206ENST00000563009 ZBED9Q6R2W3 1325 aa19.7■□□□□ 0.74
EDC3-206ENST00000563009 LRP5O75197 1615 aa19.69■□□□□ 0.74
EDC3-206ENST00000563009 EXOSC9Q06265 439 aaKnown RBP19.69■□□□□ 0.74
EDC3-206ENST00000563009 TWISTNBQ3B726 338 aaPredicted RBP19.69■□□□□ 0.74
EDC3-206ENST00000563009 CHMP4AQ9BY43 222 aa19.69■□□□□ 0.74
EDC3-206ENST00000563009 SPON1Q9HCB6 807 aa19.69■□□□□ 0.74
EDC3-206ENST00000563009 DDX21Q9NR30 783 aaKnown RBP eCLIP19.69■□□□□ 0.74
EDC3-206ENST00000563009 SCN7AQ01118 1682 aa19.68■□□□□ 0.74
EDC3-206ENST00000563009 GYS1P13807 737 aa19.68■□□□□ 0.74
EDC3-206ENST00000563009 PROSER3Q2NL68 480 aa19.68■□□□□ 0.74
EDC3-206ENST00000563009 NECTIN2Q92692 538 aa19.68■□□□□ 0.74
EDC3-206ENST00000563009 SGIP1Q9BQI5 828 aa19.68■□□□□ 0.74
EDC3-206ENST00000563009 CHPF2Q9P2E5 772 aa19.68■□□□□ 0.74
EDC3-206ENST00000563009 SRP68Q9UHB9 627 aaKnown RBP19.68■□□□□ 0.74
EDC3-206ENST00000563009 ZNF330Q9Y3S2 320 aaPredicted RBP19.68■□□□□ 0.74
EDC3-206ENST00000563009 BCORQ6W2J9 1755 aa19.67■□□□□ 0.74
EDC3-206ENST00000563009 ZPR1O75312 459 aa19.67■□□□□ 0.74
EDC3-206ENST00000563009 MYL6BP14649 208 aa19.67■□□□□ 0.74
EDC3-206ENST00000563009 PTGER2P43116 358 aa19.67■□□□□ 0.74
EDC3-206ENST00000563009 NPM2Q86SE8 214 aaKnown RBP19.67■□□□□ 0.74
EDC3-206ENST00000563009 DBF4Q9UBU7 674 aaPredicted RBP19.67■□□□□ 0.74
EDC3-206ENST00000563009 ATF5Q9Y2D1 282 aaPredicted RBP19.67■□□□□ 0.74
EDC3-206ENST00000563009 VAMP4O75379 141 aa19.66■□□□□ 0.74
EDC3-206ENST00000563009 CCDC30Q5VVM6 783 aa19.66■□□□□ 0.74
EDC3-206ENST00000563009 USPL1Q5W0Q7 1092 aa19.66■□□□□ 0.74
EDC3-206ENST00000563009 DZIP3Q86Y13 1208 aaKnown RBP19.66■□□□□ 0.74
EDC3-206ENST00000563009 TBC1D2BQ9UPU7 963 aa19.66■□□□□ 0.74
EDC3-206ENST00000563009 SRCAPQ6ZRS2 3230 aa19.66■□□□□ 0.74
EDC3-206ENST00000563009 RGL2O15211 777 aa19.65■□□□□ 0.74
EDC3-206ENST00000563009 CAMTA2O94983 1202 aa19.65■□□□□ 0.74
EDC3-206ENST00000563009 ANXA1P04083 346 aa19.65■□□□□ 0.74
EDC3-206ENST00000563009 MSL1Q68DK7 614 aa19.65■□□□□ 0.74
EDC3-206ENST00000563009 NLGN1Q8N2Q7 840 aa19.65■□□□□ 0.74
EDC3-206ENST00000563009 BCL2L12Q9HB09 334 aa19.65■□□□□ 0.74
EDC3-206ENST00000563009 HYPKQ9NX55 129 aa19.64■□□□□ 0.73
EDC3-206ENST00000563009 FKBP8Q14318 412 aa19.63■□□□□ 0.73
EDC3-206ENST00000563009 ERVV-1B6SEH8 477 aa19.62■□□□□ 0.73
EDC3-206ENST00000563009 TTLL7Q6ZT98 887 aa19.62■□□□□ 0.73
EDC3-206ENST00000563009 MAP3K15Q6ZN16 1313 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms