RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
TPM1-221ENST00000559831 SIK1P57059 783 aa13.35□□□□□ -0.27
TPM1-221ENST00000559831 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
TPM1-221ENST00000559831 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.35□□□□□ -0.27
TPM1-221ENST00000559831 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
TPM1-221ENST00000559831 ANXA1P04083 346 aa13.34□□□□□ -0.27
TPM1-221ENST00000559831 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
TPM1-221ENST00000559831 IRX6P78412 446 aaPredicted RBP13.34□□□□□ -0.27
TPM1-221ENST00000559831 TEX13AQ9BXU3 409 aaPredicted RBP13.34□□□□□ -0.27
TPM1-221ENST00000559831 NOB1Q9ULX3 412 aaKnown RBP13.34□□□□□ -0.27
TPM1-221ENST00000559831 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
TPM1-221ENST00000559831 STARD3NLO95772 234 aa13.33□□□□□ -0.28
TPM1-221ENST00000559831 NEFLP07196 543 aa13.33□□□□□ -0.28
TPM1-221ENST00000559831 G2E3Q7L622 706 aa13.33□□□□□ -0.28
TPM1-221ENST00000559831 DBF4Q9UBU7 674 aaPredicted RBP13.33□□□□□ -0.28
TPM1-221ENST00000559831 CCNL1Q9UK58 526 aaPredicted RBP13.33□□□□□ -0.28
TPM1-221ENST00000559831 RNF123Q5XPI4 1314 aa13.33□□□□□ -0.28
TPM1-221ENST00000559831 MYH14Q7Z406 1995 aaKnown RBP13.32□□□□□ -0.28
TPM1-221ENST00000559831 APBA3O96018 575 aa13.32□□□□□ -0.28
TPM1-221ENST00000559831 A1BGP04217 495 aa13.32□□□□□ -0.28
TPM1-221ENST00000559831 MYL6BP14649 208 aa13.32□□□□□ -0.28
TPM1-221ENST00000559831 KCNQ4P56696 695 aa13.32□□□□□ -0.28
TPM1-221ENST00000559831 ITPK1Q13572 414 aa13.32□□□□□ -0.28
TPM1-221ENST00000559831 PROSER3Q2NL68 480 aa13.32□□□□□ -0.28
TPM1-221ENST00000559831 ZKSCAN2Q63HK3 967 aa13.32□□□□□ -0.28
TPM1-221ENST00000559831 IPO8O15397 1037 aaKnown RBP13.31□□□□□ -0.28
TPM1-221ENST00000559831 CYP19A1P11511 503 aaPredicted RBP13.31□□□□□ -0.28
TPM1-221ENST00000559831 BRPF1P55201 1214 aaPredicted RBP13.31□□□□□ -0.28
TPM1-221ENST00000559831 PHAXQ9H814 394 aaKnown RBP13.31□□□□□ -0.28
TPM1-221ENST00000559831 DDX21Q9NR30 783 aaKnown RBP eCLIP13.31□□□□□ -0.28
TPM1-221ENST00000559831 HYPKQ9NX55 129 aa13.31□□□□□ -0.28
TPM1-221ENST00000559831 TNNQ9UQP3 1299 aa13.31□□□□□ -0.28
TPM1-221ENST00000559831 ERBB4Q15303 1308 aa13.31□□□□□ -0.28
TPM1-221ENST00000559831 RREB1Q92766 1687 aa13.31□□□□□ -0.28
TPM1-221ENST00000559831 FLIIQ13045 1269 aa13.3□□□□□ -0.28
TPM1-221ENST00000559831 PDIA6Q15084 440 aa13.3□□□□□ -0.28
TPM1-221ENST00000559831 LINC00116Q8NCU8 138 aa13.3□□□□□ -0.28
TPM1-221ENST00000559831 CLUAP1Q96AJ1 413 aa13.3□□□□□ -0.28
TPM1-221ENST00000559831 ZNF330Q9Y3S2 320 aaPredicted RBP13.3□□□□□ -0.28
TPM1-221ENST00000559831 RGPD3A6NKT7 1758 aaPredicted RBP13.3□□□□□ -0.28
TPM1-221ENST00000559831 RGPD4Q7Z3J3 1758 aa13.3□□□□□ -0.28
TPM1-221ENST00000559831 NBPF26B4DH59 902 aa13.29□□□□□ -0.28
TPM1-221ENST00000559831 AIMP1Q12904 312 aaKnown RBP13.29□□□□□ -0.28
TPM1-221ENST00000559831 FKBP5Q13451 457 aaPredicted RBP13.29□□□□□ -0.28
TPM1-221ENST00000559831 C20orf194Q5TEA3 1177 aa13.29□□□□□ -0.28
TPM1-221ENST00000559831 NBPF14Q5TI25 921 aa13.29□□□□□ -0.28
TPM1-221ENST00000559831 NBPF10Q6P3W6 841 aaKnown RBP13.29□□□□□ -0.28
TPM1-221ENST00000559831 ATF7IPQ6VMQ6 1270 aa13.29□□□□□ -0.28
TPM1-221ENST00000559831 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
TPM1-221ENST00000559831 NBPF15Q8N660 670 aa13.29□□□□□ -0.28
TPM1-221ENST00000559831 API5Q9BZZ5 524 aaKnown RBP13.29□□□□□ -0.28
TPM1-221ENST00000559831 CCDC87Q9NVE4 849 aa13.29□□□□□ -0.28
TPM1-221ENST00000559831 ZBTB1Q9Y2K1 713 aa13.29□□□□□ -0.28
TPM1-221ENST00000559831 C4BP0C0L5 1744 aa13.29□□□□□ -0.28
TPM1-221ENST00000559831 PTPRCP08575 1304 aa13.29□□□□□ -0.28
TPM1-221ENST00000559831 ARFGEF2Q9Y6D5 1785 aa13.28□□□□□ -0.28
TPM1-221ENST00000559831 TRIM27P14373 513 aa13.28□□□□□ -0.28
TPM1-221ENST00000559831 CRKLP46109 303 aaKnown RBP13.28□□□□□ -0.28
TPM1-221ENST00000559831 SF3B2Q13435 895 aaKnown RBP13.28□□□□□ -0.28
TPM1-221ENST00000559831 PANK1Q8TE04 598 aa13.28□□□□□ -0.28
TPM1-221ENST00000559831 XAGE3Q8WTP9 111 aa13.28□□□□□ -0.28
TPM1-221ENST00000559831 ARHGAP45Q92619 1136 aa13.28□□□□□ -0.28
TPM1-221ENST00000559831 N4BP2Q86UW6 1770 aaPredicted RBP13.27□□□□□ -0.28
TPM1-221ENST00000559831 MS4A1P11836 297 aa13.27□□□□□ -0.29
TPM1-221ENST00000559831 FKBP8Q14318 412 aa13.27□□□□□ -0.29
TPM1-221ENST00000559831 TXNRD1Q16881 649 aa13.27□□□□□ -0.29
TPM1-221ENST00000559831 DZIP1LQ8IYY4 767 aaKnown RBP13.27□□□□□ -0.29
TPM1-221ENST00000559831 ARXQ96QS3 562 aa13.27□□□□□ -0.29
TPM1-221ENST00000559831 NUP188Q5SRE5 1749 aa13.27□□□□□ -0.29
TPM1-221ENST00000559831 AFDNP55196 1824 aaKnown RBP13.27□□□□□ -0.29
TPM1-221ENST00000559831 F6X3S4 739 aa13.26□□□□□ -0.29
TPM1-221ENST00000559831 PLSCR1O15162 318 aa13.26□□□□□ -0.29
TPM1-221ENST00000559831 DDX58O95786 925 aaKnown RBP13.26□□□□□ -0.29
TPM1-221ENST00000559831 RLBP1P12271 317 aa13.26□□□□□ -0.29
TPM1-221ENST00000559831 SLC27A3Q5K4L6 730 aa13.26□□□□□ -0.29
TPM1-221ENST00000559831 INTS5Q6P9B9 1019 aaKnown RBP13.26□□□□□ -0.29
TPM1-221ENST00000559831 COPS6Q7L5N1 327 aa13.26□□□□□ -0.29
TPM1-221ENST00000559831 NPM2Q86SE8 214 aaKnown RBP13.26□□□□□ -0.29
TPM1-221ENST00000559831 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
TPM1-221ENST00000559831 LRRC4BQ9NT99 713 aa13.26□□□□□ -0.29
TPM1-221ENST00000559831 CNTNAP4Q9C0A0 1308 aa13.25□□□□□ -0.29
TPM1-221ENST00000559831 PDE3AQ14432 1141 aa13.25□□□□□ -0.29
TPM1-221ENST00000559831 SLC4A10Q6U841 1118 aa13.25□□□□□ -0.29
TPM1-221ENST00000559831 LRP10Q7Z4F1 713 aa13.25□□□□□ -0.29
TPM1-221ENST00000559831 COG6Q9Y2V7 657 aa13.25□□□□□ -0.29
TPM1-221ENST00000559831 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
TPM1-221ENST00000559831 ABCC4O15439 1325 aa13.24□□□□□ -0.29
TPM1-221ENST00000559831 PI4KAP2A4QPH2 592 aa13.24□□□□□ -0.29
TPM1-221ENST00000559831 GNPATO15228 680 aa13.24□□□□□ -0.29
TPM1-221ENST00000559831 IL6STP40189 918 aaPredicted RBP13.24□□□□□ -0.29
TPM1-221ENST00000559831 BAG6P46379 1132 aa13.24□□□□□ -0.29
TPM1-221ENST00000559831 EN1Q05925 392 aaPredicted RBP13.24□□□□□ -0.29
TPM1-221ENST00000559831 KIF6Q6ZMV9 814 aa13.24□□□□□ -0.29
TPM1-221ENST00000559831 TTLL7Q6ZT98 887 aa13.24□□□□□ -0.29
TPM1-221ENST00000559831 RIC3Q7Z5B4 369 aa13.24□□□□□ -0.29
TPM1-221ENST00000559831 ITPRIPQ8IWB1 547 aa13.24□□□□□ -0.29
TPM1-221ENST00000559831 TMEM57Q8N5G2 664 aa13.24□□□□□ -0.29
TPM1-221ENST00000559831 PI4KAP1Q8N8J0 262 aa13.24□□□□□ -0.29
TPM1-221ENST00000559831 AK7Q96M32 723 aa13.24□□□□□ -0.29
TPM1-221ENST00000559831 MAP3K2Q9Y2U5 619 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms