RNA–Protein interactions for RNA: ENST00000559160.1

RNF111-205, Transcript of ring finger protein 111, humanhuman

TSL 3

Gene RNF111, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-205ENST00000559160 SMIM5Q71RC9 77 aa29.84■■■□□ 2.37
RNF111-205ENST00000559160 ZNF521Q96K83 1311 aa29.84■■■□□ 2.37
RNF111-205ENST00000559160 CCDC87Q9NVE4 849 aa29.83■■■□□ 2.37
RNF111-205ENST00000559160 RPS6KA4O75676 772 aa29.82■■■□□ 2.36
RNF111-205ENST00000559160 COL23A1Q86Y22 540 aaPredicted RBP29.81■■■□□ 2.36
RNF111-205ENST00000559160 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.8■■■□□ 2.36
RNF111-205ENST00000559160 KRT24Q2M2I5 525 aa29.8■■■□□ 2.36
RNF111-205ENST00000559160 RTCBQ9Y3I0 505 aaKnown RBP29.8■■■□□ 2.36
RNF111-205ENST00000559160 MYH14Q7Z406 1995 aaKnown RBP29.8■■■□□ 2.36
RNF111-205ENST00000559160 PHF14O94880 888 aa29.79■■■□□ 2.36
RNF111-205ENST00000559160 A1BGP04217 495 aa29.79■■■□□ 2.36
RNF111-205ENST00000559160 SSFA2P28290 1259 aa29.79■■■□□ 2.36
RNF111-205ENST00000559160 FLAD1Q8NFF5 587 aa29.79■■■□□ 2.36
RNF111-205ENST00000559160 SPINK5Q9NQ38 1064 aaPredicted RBP29.79■■■□□ 2.36
RNF111-205ENST00000559160 ZBTB1Q9Y2K1 713 aa29.79■■■□□ 2.36
RNF111-205ENST00000559160 TSR2Q969E8 191 aaKnown RBP29.78■■■□□ 2.36
RNF111-205ENST00000559160 TUBGCP6Q96RT7 1819 aa29.77■■■□□ 2.36
RNF111-205ENST00000559160 UBR3Q6ZT12 1888 aa29.76■■■□□ 2.36
RNF111-205ENST00000559160 CANXP27824 592 aaKnown RBP29.76■■■□□ 2.35
RNF111-205ENST00000559160 TRAPPC3LQ5T215 181 aa29.76■■■□□ 2.35
RNF111-205ENST00000559160 QSER1Q2KHR3 1735 aa29.76■■■□□ 2.35
RNF111-205ENST00000559160 ARHGEF1Q92888 912 aaKnown RBP29.75■■■□□ 2.35
RNF111-205ENST00000559160 SOS1Q07889 1333 aaPredicted RBP29.74■■■□□ 2.35
RNF111-205ENST00000559160 ADRA2BP18089 450 aa29.74■■■□□ 2.35
RNF111-205ENST00000559160 CASZ1Q86V15 1759 aa29.73■■■□□ 2.35
RNF111-205ENST00000559160 MSH5O43196 834 aa29.73■■■□□ 2.35
RNF111-205ENST00000559160 C8orf58Q8NAV2 365 aa29.73■■■□□ 2.35
RNF111-205ENST00000559160 NBPF26B4DH59 902 aa29.72■■■□□ 2.35
RNF111-205ENST00000559160 EIF5P55010 431 aaKnown RBP29.72■■■□□ 2.35
RNF111-205ENST00000559160 GOLGA2Q08379 1002 aa29.72■■■□□ 2.35
RNF111-205ENST00000559160 DUSP27Q5VZP5 1158 aa29.72■■■□□ 2.35
RNF111-205ENST00000559160 NBPF10Q6P3W6 841 aaKnown RBP29.72■■■□□ 2.35
RNF111-205ENST00000559160 NBPF15Q8N660 670 aa29.72■■■□□ 2.35
RNF111-205ENST00000559160 FANCIQ9NVI1 1328 aa29.71■■■□□ 2.35
RNF111-205ENST00000559160 HOXB7P09629 217 aa29.71■■■□□ 2.35
RNF111-205ENST00000559160 PIP4K2AP48426 406 aaPredicted RBP29.71■■■□□ 2.35
RNF111-205ENST00000559160 SLC16A10Q8TF71 515 aa29.71■■■□□ 2.35
RNF111-205ENST00000559160 ZBTB7AO95365 584 aa29.7■■■□□ 2.35
RNF111-205ENST00000559160 EIF2S2P20042 333 aaKnown RBP29.7■■■□□ 2.35
RNF111-205ENST00000559160 IL6STP40189 918 aaPredicted RBP29.7■■■□□ 2.35
RNF111-205ENST00000559160 HNRNPUQ00839 825 aaKnown RBP eCLIP29.7■■■□□ 2.35
RNF111-205ENST00000559160 ELL2O00472 640 aaPredicted RBP29.69■■■□□ 2.34
RNF111-205ENST00000559160 MYH16Q9H6N6 1097 aa29.69■■■□□ 2.34
RNF111-205ENST00000559160 RFC4P35249 363 aa29.68■■■□□ 2.34
RNF111-205ENST00000559160 TSPYL6Q8N831 410 aa29.68■■■□□ 2.34
RNF111-205ENST00000559160 MTFR1LQ9H019 292 aa29.67■■■□□ 2.34
RNF111-205ENST00000559160 LAMB4A4D0S4 1761 aa29.67■■■□□ 2.34
RNF111-205ENST00000559160 COL15A1P39059 1388 aa29.66■■■□□ 2.34
RNF111-205ENST00000559160 SLFN5Q08AF3 891 aa29.66■■■□□ 2.34
RNF111-205ENST00000559160 NECTIN2Q92692 538 aa29.66■■■□□ 2.34
RNF111-205ENST00000559160 CDCA7LQ96GN5 454 aa29.66■■■□□ 2.34
RNF111-205ENST00000559160 ATF5Q9Y2D1 282 aaPredicted RBP29.66■■■□□ 2.34
RNF111-205ENST00000559160 ERBB4Q15303 1308 aa29.66■■■□□ 2.34
RNF111-205ENST00000559160 E9PSI1 815 aa29.65■■■□□ 2.34
RNF111-205ENST00000559160 PDIA6Q15084 440 aa29.65■■■□□ 2.34
RNF111-205ENST00000559160 ZNF330Q9Y3S2 320 aaPredicted RBP29.65■■■□□ 2.34
RNF111-205ENST00000559160 EXOSC9Q06265 439 aaKnown RBP29.64■■■□□ 2.34
RNF111-205ENST00000559160 HDGFL1Q5TGJ6 251 aa29.64■■■□□ 2.34
RNF111-205ENST00000559160 A0A087WZG4 1122 aa29.63■■■□□ 2.33
RNF111-205ENST00000559160 SPON1Q9HCB6 807 aa29.63■■■□□ 2.33
RNF111-205ENST00000559160 SRP68Q9UHB9 627 aaKnown RBP29.63■■■□□ 2.33
RNF111-205ENST00000559160 NARFQ9UHQ1 456 aa29.62■■■□□ 2.33
RNF111-205ENST00000559160 USP42Q9H9J4 1324 aaKnown RBP29.62■■■□□ 2.33
RNF111-205ENST00000559160 MYL6BP14649 208 aa29.61■■■□□ 2.33
RNF111-205ENST00000559160 PROSER3Q2NL68 480 aa29.61■■■□□ 2.33
RNF111-205ENST00000559160 TWISTNBQ3B726 338 aaPredicted RBP29.61■■■□□ 2.33
RNF111-205ENST00000559160 TRMT2AQ8IZ69 625 aaKnown RBP29.61■■■□□ 2.33
RNF111-205ENST00000559160 TBC1D2BQ9UPU7 963 aa29.61■■■□□ 2.33
RNF111-205ENST00000559160 ZPR1O75312 459 aa29.6■■■□□ 2.33
RNF111-205ENST00000559160 GYS1P13807 737 aa29.6■■■□□ 2.33
RNF111-205ENST00000559160 MSL1Q68DK7 614 aa29.6■■■□□ 2.33
RNF111-205ENST00000559160 LRP10Q7Z4F1 713 aa29.6■■■□□ 2.33
RNF111-205ENST00000559160 NPM2Q86SE8 214 aaKnown RBP29.6■■■□□ 2.33
RNF111-205ENST00000559160 ANXA1P04083 346 aa29.59■■■□□ 2.33
RNF111-205ENST00000559160 PTGER2P43116 358 aa29.59■■■□□ 2.33
RNF111-205ENST00000559160 USPL1Q5W0Q7 1092 aa29.59■■■□□ 2.33
RNF111-205ENST00000559160 SGIP1Q9BQI5 828 aa29.59■■■□□ 2.33
RNF111-205ENST00000559160 DDX21Q9NR30 783 aaKnown RBP eCLIP29.59■■■□□ 2.33
RNF111-205ENST00000559160 ARXQ96QS3 562 aa29.58■■■□□ 2.33
RNF111-205ENST00000559160 CHPF2Q9P2E5 772 aa29.58■■■□□ 2.33
RNF111-205ENST00000559160 C4AP0C0L4 1744 aa29.57■■■□□ 2.32
RNF111-205ENST00000559160 VAMP4O75379 141 aa29.57■■■□□ 2.32
RNF111-205ENST00000559160 DZIP3Q86Y13 1208 aaKnown RBP29.57■■■□□ 2.32
RNF111-205ENST00000559160 DBF4Q9UBU7 674 aaPredicted RBP29.57■■■□□ 2.32
RNF111-205ENST00000559160 NLGN1Q8N2Q7 840 aa29.56■■■□□ 2.32
RNF111-205ENST00000559160 BCL2L12Q9HB09 334 aa29.56■■■□□ 2.32
RNF111-205ENST00000559160 CAMTA2O94983 1202 aa29.55■■■□□ 2.32
RNF111-205ENST00000559160 FKBP8Q14318 412 aa29.55■■■□□ 2.32
RNF111-205ENST00000559160 CCDC30Q5VVM6 783 aa29.55■■■□□ 2.32
RNF111-205ENST00000559160 CHMP4AQ9BY43 222 aa29.55■■■□□ 2.32
RNF111-205ENST00000559160 ZBED9Q6R2W3 1325 aa29.54■■■□□ 2.32
RNF111-205ENST00000559160 TTLL7Q6ZT98 887 aa29.53■■■□□ 2.32
RNF111-205ENST00000559160 COL24A1Q17RW2 1714 aa29.51■■■□□ 2.32
RNF111-205ENST00000559160 POLD1P28340 1107 aa29.51■■■□□ 2.31
RNF111-205ENST00000559160 COPS6Q7L5N1 327 aa29.51■■■□□ 2.31
RNF111-205ENST00000559160 HYPKQ9NX55 129 aa29.51■■■□□ 2.31
RNF111-205ENST00000559160 TCERG1O14776 1098 aaKnown RBP29.5■■■□□ 2.31
RNF111-205ENST00000559160 XAGE3Q8WTP9 111 aa29.5■■■□□ 2.31
RNF111-205ENST00000559160 TM4SF1P30408 202 aa29.49■■■□□ 2.31
RNF111-205ENST00000559160 MMP10P09238 476 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms