RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 TAF1LQ8IZX4 1826 aa18.07■□□□□ 0.48
PRKCH-206ENST00000553830 COL5A3P25940 1745 aaPredicted RBP18.06■□□□□ 0.48
PRKCH-206ENST00000553830 APBA3O96018 575 aa18.06■□□□□ 0.48
PRKCH-206ENST00000553830 MYL6BP14649 208 aa18.06■□□□□ 0.48
PRKCH-206ENST00000553830 PROSER3Q2NL68 480 aa18.06■□□□□ 0.48
PRKCH-206ENST00000553830 NOB1Q9ULX3 412 aaKnown RBP18.06■□□□□ 0.48
PRKCH-206ENST00000553830 A1BGP04217 495 aa18.05■□□□□ 0.48
PRKCH-206ENST00000553830 ITPK1Q13572 414 aa18.05■□□□□ 0.48
PRKCH-206ENST00000553830 VSIG10Q8N0Z9 540 aa18.05■□□□□ 0.48
PRKCH-206ENST00000553830 CCNL1Q9UK58 526 aaPredicted RBP18.05■□□□□ 0.48
PRKCH-206ENST00000553830 ZNF330Q9Y3S2 320 aaPredicted RBP18.05■□□□□ 0.48
PRKCH-206ENST00000553830 KIF16BQ96L93 1317 aa18.04■□□□□ 0.48
PRKCH-206ENST00000553830 G2E3Q7L622 706 aa18.04■□□□□ 0.48
PRKCH-206ENST00000553830 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.04■□□□□ 0.48
PRKCH-206ENST00000553830 TNNQ9UQP3 1299 aa18.04■□□□□ 0.48
PRKCH-206ENST00000553830 MYH14Q7Z406 1995 aaKnown RBP18.04■□□□□ 0.48
PRKCH-206ENST00000553830 STARD3NLO95772 234 aa18.03■□□□□ 0.48
PRKCH-206ENST00000553830 TEX13AQ9BXU3 409 aaPredicted RBP18.03■□□□□ 0.48
PRKCH-206ENST00000553830 CHMP4AQ9BY43 222 aa18.03■□□□□ 0.48
PRKCH-206ENST00000553830 PHAXQ9H814 394 aaKnown RBP18.03■□□□□ 0.48
PRKCH-206ENST00000553830 DBF4Q9UBU7 674 aaPredicted RBP18.03■□□□□ 0.48
PRKCH-206ENST00000553830 ZNF831Q5JPB2 1677 aa18.03■□□□□ 0.48
PRKCH-206ENST00000553830 CICQ96RK0 1608 aaPredicted RBP18.02■□□□□ 0.48
PRKCH-206ENST00000553830 NEFLP07196 543 aa18.02■□□□□ 0.48
PRKCH-206ENST00000553830 AIMP1Q12904 312 aaKnown RBP18.02■□□□□ 0.48
PRKCH-206ENST00000553830 ZKSCAN2Q63HK3 967 aa18.02■□□□□ 0.48
PRKCH-206ENST00000553830 LINC00116Q8NCU8 138 aa18.02■□□□□ 0.48
PRKCH-206ENST00000553830 CLUAP1Q96AJ1 413 aa18.02■□□□□ 0.48
PRKCH-206ENST00000553830 CYP19A1P11511 503 aaPredicted RBP18.01■□□□□ 0.47
PRKCH-206ENST00000553830 DDX21Q9NR30 783 aaKnown RBP eCLIP18.01■□□□□ 0.47
PRKCH-206ENST00000553830 NBPF26B4DH59 902 aa18■□□□□ 0.47
PRKCH-206ENST00000553830 IPO8O15397 1037 aaKnown RBP18■□□□□ 0.47
PRKCH-206ENST00000553830 CRKLP46109 303 aaKnown RBP18■□□□□ 0.47
PRKCH-206ENST00000553830 FLIIQ13045 1269 aa18■□□□□ 0.47
PRKCH-206ENST00000553830 SF3B2Q13435 895 aaKnown RBP18■□□□□ 0.47
PRKCH-206ENST00000553830 PDIA6Q15084 440 aa18■□□□□ 0.47
PRKCH-206ENST00000553830 C20orf194Q5TEA3 1177 aa18■□□□□ 0.47
PRKCH-206ENST00000553830 NBPF14Q5TI25 921 aa18■□□□□ 0.47
PRKCH-206ENST00000553830 NBPF10Q6P3W6 841 aaKnown RBP18■□□□□ 0.47
PRKCH-206ENST00000553830 NBPF15Q8N660 670 aa18■□□□□ 0.47
PRKCH-206ENST00000553830 ARXQ96QS3 562 aa18■□□□□ 0.47
PRKCH-206ENST00000553830 ZBTB1Q9Y2K1 713 aa18■□□□□ 0.47
PRKCH-206ENST00000553830 RNF123Q5XPI4 1314 aa17.99■□□□□ 0.47
PRKCH-206ENST00000553830 FKBP5Q13451 457 aaPredicted RBP17.99■□□□□ 0.47
PRKCH-206ENST00000553830 FTSJ3Q8IY81 847 aaKnown RBP17.99■□□□□ 0.47
PRKCH-206ENST00000553830 PANK1Q8TE04 598 aa17.99■□□□□ 0.47
PRKCH-206ENST00000553830 XAGE3Q8WTP9 111 aa17.99■□□□□ 0.47
PRKCH-206ENST00000553830 CCDC87Q9NVE4 849 aa17.99■□□□□ 0.47
PRKCH-206ENST00000553830 HYPKQ9NX55 129 aa17.99■□□□□ 0.47
PRKCH-206ENST00000553830 C4BP0C0L5 1744 aa17.98■□□□□ 0.47
PRKCH-206ENST00000553830 TRIM27P14373 513 aa17.98■□□□□ 0.47
PRKCH-206ENST00000553830 ATF7IPQ6VMQ6 1270 aa17.98■□□□□ 0.47
PRKCH-206ENST00000553830 RREB1Q92766 1687 aa17.98■□□□□ 0.47
PRKCH-206ENST00000553830 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
PRKCH-206ENST00000553830 F6X3S4 739 aa17.97■□□□□ 0.47
PRKCH-206ENST00000553830 BRPF1P55201 1214 aaPredicted RBP17.97■□□□□ 0.47
PRKCH-206ENST00000553830 TXNRD1Q16881 649 aa17.97■□□□□ 0.47
PRKCH-206ENST00000553830 API5Q9BZZ5 524 aaKnown RBP17.97■□□□□ 0.47
PRKCH-206ENST00000553830 LRRC4BQ9NT99 713 aa17.97■□□□□ 0.47
PRKCH-206ENST00000553830 RGPD3A6NKT7 1758 aaPredicted RBP17.96■□□□□ 0.47
PRKCH-206ENST00000553830 RGPD4Q7Z3J3 1758 aa17.96■□□□□ 0.47
PRKCH-206ENST00000553830 ARFGEF2Q9Y6D5 1785 aa17.96■□□□□ 0.47
PRKCH-206ENST00000553830 EN1Q05925 392 aaPredicted RBP17.96■□□□□ 0.47
PRKCH-206ENST00000553830 INTS5Q6P9B9 1019 aaKnown RBP17.96■□□□□ 0.47
PRKCH-206ENST00000553830 COPS6Q7L5N1 327 aa17.96■□□□□ 0.47
PRKCH-206ENST00000553830 PTPRCP08575 1304 aa17.96■□□□□ 0.46
PRKCH-206ENST00000553830 RLBP1P12271 317 aa17.95■□□□□ 0.46
PRKCH-206ENST00000553830 FKBP8Q14318 412 aa17.95■□□□□ 0.46
PRKCH-206ENST00000553830 SLC4A10Q6U841 1118 aa17.95■□□□□ 0.46
PRKCH-206ENST00000553830 SMIM5Q71RC9 77 aa17.95■□□□□ 0.46
PRKCH-206ENST00000553830 NPM2Q86SE8 214 aaKnown RBP17.95■□□□□ 0.46
PRKCH-206ENST00000553830 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
PRKCH-206ENST00000553830 CRBNQ96SW2 442 aa17.95■□□□□ 0.46
PRKCH-206ENST00000553830 AFDNP55196 1824 aaKnown RBP17.95■□□□□ 0.46
PRKCH-206ENST00000553830 PLSCR1O15162 318 aa17.94■□□□□ 0.46
PRKCH-206ENST00000553830 GNPATO15228 680 aa17.94■□□□□ 0.46
PRKCH-206ENST00000553830 EZH2Q15910 746 aaKnown RBP17.94■□□□□ 0.46
PRKCH-206ENST00000553830 SLC27A3Q5K4L6 730 aa17.94■□□□□ 0.46
PRKCH-206ENST00000553830 TTLL7Q6ZT98 887 aa17.94■□□□□ 0.46
PRKCH-206ENST00000553830 PROM2Q8N271 834 aa17.94■□□□□ 0.46
PRKCH-206ENST00000553830 AK7Q96M32 723 aa17.94■□□□□ 0.46
PRKCH-206ENST00000553830 NUP188Q5SRE5 1749 aa17.94■□□□□ 0.46
PRKCH-206ENST00000553830 DDX58O95786 925 aaKnown RBP17.93■□□□□ 0.46
PRKCH-206ENST00000553830 BAG6P46379 1132 aa17.93■□□□□ 0.46
PRKCH-206ENST00000553830 LRP10Q7Z4F1 713 aa17.93■□□□□ 0.46
PRKCH-206ENST00000553830 RIC3Q7Z5B4 369 aa17.93■□□□□ 0.46
PRKCH-206ENST00000553830 DEFB132Q7Z7B7 95 aa17.93■□□□□ 0.46
PRKCH-206ENST00000553830 ITPRIPQ8IWB1 547 aa17.93■□□□□ 0.46
PRKCH-206ENST00000553830 ARHGAP45Q92619 1136 aa17.93■□□□□ 0.46
PRKCH-206ENST00000553830 COG6Q9Y2V7 657 aa17.93■□□□□ 0.46
PRKCH-206ENST00000553830 CNTNAP4Q9C0A0 1308 aa17.93■□□□□ 0.46
PRKCH-206ENST00000553830 EP400Q96L91 3159 aa17.93■□□□□ 0.46
PRKCH-206ENST00000553830 UBR3Q6ZT12 1888 aa17.92■□□□□ 0.46
PRKCH-206ENST00000553830 N4BP2Q86UW6 1770 aaPredicted RBP17.92■□□□□ 0.46
PRKCH-206ENST00000553830 PI4KAP2A4QPH2 592 aa17.92■□□□□ 0.46
PRKCH-206ENST00000553830 PHF14O94880 888 aa17.92■□□□□ 0.46
PRKCH-206ENST00000553830 MS4A1P11836 297 aa17.92■□□□□ 0.46
PRKCH-206ENST00000553830 KIF6Q6ZMV9 814 aa17.92■□□□□ 0.46
PRKCH-206ENST00000553830 TMEM57Q8N5G2 664 aa17.92■□□□□ 0.46
PRKCH-206ENST00000553830 PI4KAP1Q8N8J0 262 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms