RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 JAKMIP2Q96AA8 810 aa10.52□□□□□ -0.72
TSC1-208ENST00000545250 STIM2Q9P246 746 aa10.52□□□□□ -0.72
TSC1-208ENST00000545250 TRAK1Q9UPV9 953 aa10.52□□□□□ -0.72
TSC1-208ENST00000545250 CFAP100Q494V2 611 aa10.52□□□□□ -0.73
TSC1-208ENST00000545250 GBP7Q8N8V2 638 aaPredicted RBP10.52□□□□□ -0.73
TSC1-208ENST00000545250 BICD1Q96G01 975 aa10.52□□□□□ -0.73
TSC1-208ENST00000545250 YEATS4O95619 227 aa10.52□□□□□ -0.73
TSC1-208ENST00000545250 LRP2BPQ9P2M1 347 aa10.52□□□□□ -0.73
TSC1-208ENST00000545250 FIBPO43427 364 aa10.52□□□□□ -0.73
TSC1-208ENST00000545250 TRAF1Q13077 416 aa10.52□□□□□ -0.73
TSC1-208ENST00000545250 POLR3DP05423 398 aaPredicted RBP10.52□□□□□ -0.73
TSC1-208ENST00000545250 TBC1D31Q96DN5 1066 aa10.52□□□□□ -0.73
TSC1-208ENST00000545250 GIPC1O14908 333 aa10.52□□□□□ -0.73
TSC1-208ENST00000545250 ERICH4A6NGS2 130 aa10.51□□□□□ -0.73
TSC1-208ENST00000545250 TDRD12Q587J7 1177 aaKnown RBP10.51□□□□□ -0.73
TSC1-208ENST00000545250 FILIP1Q7Z7B0 1213 aa10.51□□□□□ -0.73
TSC1-208ENST00000545250 GSDMBQ8TAX9 411 aa10.51□□□□□ -0.73
TSC1-208ENST00000545250 ANKFY1Q9P2R3 1169 aa10.51□□□□□ -0.73
TSC1-208ENST00000545250 MKNK2Q9HBH9 465 aa10.51□□□□□ -0.73
TSC1-208ENST00000545250 RAI14Q9P0K7 980 aa10.51□□□□□ -0.73
TSC1-208ENST00000545250 HSF2BPO75031 334 aa10.51□□□□□ -0.73
TSC1-208ENST00000545250 CALML4Q96GE6 196 aa10.51□□□□□ -0.73
TSC1-208ENST00000545250 TATP17735 454 aaPredicted RBP10.5□□□□□ -0.73
TSC1-208ENST00000545250 GOLIM4O00461 696 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 CCDC96Q2M329 555 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 NUF2Q9BZD4 464 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 IMPG2Q9BZV3 1241 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 MYO1BO43795 1136 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 PRPF4BQ13523 1007 aaKnown RBP10.5□□□□□ -0.73
TSC1-208ENST00000545250 SMARCC1Q92922 1105 aaPredicted RBP10.5□□□□□ -0.73
TSC1-208ENST00000545250 TRIM7Q9C029 511 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 WDR46O15213 610 aaKnown RBP10.5□□□□□ -0.73
TSC1-208ENST00000545250 CAVIN4Q5BKX8 364 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 PPP4R3BQ5MIZ7 849 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 CEP128Q6ZU80 1094 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 SELENOOQ9BVL4 669 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 CCDC144AA2RUR9 1427 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 MAATS1Q7Z4T9 603 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 PKNOX2Q96KN3 472 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 SRCIN1Q9C0H9 1055 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 SURF6O75683 361 aaKnown RBP10.5□□□□□ -0.73
TSC1-208ENST00000545250 CALCOCO2Q13137 446 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 NUP88Q99567 741 aaPredicted RBP10.5□□□□□ -0.73
TSC1-208ENST00000545250 PRKCSHP14314 528 aaPredicted RBP10.5□□□□□ -0.73
TSC1-208ENST00000545250 PRR16Q569H4 304 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 MSL1Q68DK7 614 aa10.5□□□□□ -0.73
TSC1-208ENST00000545250 HVCN1Q96D96 273 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 VCX3BQ9H321 246 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 LPXNO60711 386 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 FAM169AQ9Y6X4 670 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 VPS52Q8N1B4 723 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 PNISRQ8TF01 805 aaKnown RBP10.49□□□□□ -0.73
TSC1-208ENST00000545250 SFPQP23246 707 aaKnown RBP eCLIP10.49□□□□□ -0.73
TSC1-208ENST00000545250 GEN1Q17RS7 908 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 NUTM2DQ5VT03 806 aaPredicted RBP10.49□□□□□ -0.73
TSC1-208ENST00000545250 KIF18AQ8NI77 898 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 CABP4P57796 275 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 HAUS8Q9BT25 410 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 LIG1P18858 919 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 CPLX3Q8WVH0 158 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 ZSCAN31Q96LW9 406 aaPredicted RBP10.49□□□□□ -0.73
TSC1-208ENST00000545250 COG6Q9Y2V7 657 aa10.49□□□□□ -0.73
TSC1-208ENST00000545250 GPATCH11Q8N954 259 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 GNAI2P04899 355 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 SRGAP1Q7Z6B7 1085 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 TNNT1P13805 278 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 ATRIPQ8WXE1 791 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 NUP62CLQ9H1M0 184 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 RFC1P35251 1148 aaPredicted RBP10.48□□□□□ -0.73
TSC1-208ENST00000545250 LARP1BQ659C4 914 aaKnown RBP10.48□□□□□ -0.73
TSC1-208ENST00000545250 RUNDC1Q96C34 613 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 SPAG5Q96R06 1193 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 CIB2O75838 187 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 WHAMMQ8TF30 809 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 VCXQ9H320 206 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 RABGAP1Q9Y3P9 1069 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 ZPR1O75312 459 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 NEK4P51957 841 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 PAIP2Q9BPZ3 127 aaKnown RBP10.48□□□□□ -0.73
TSC1-208ENST00000545250 STRN4Q9NRL3 753 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 PPP6R1Q9UPN7 881 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 SAMM50Q9Y512 469 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 CCDC18Q5T9S5 1454 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 SETDB1Q15047 1291 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 AIDAQ96BJ3 306 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 SPG7Q9UQ90 795 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 AKAP2Q9Y2D5 859 aa10.48□□□□□ -0.73
TSC1-208ENST00000545250 PHACTR2O75167 634 aa10.47□□□□□ -0.73
TSC1-208ENST00000545250 PRKRIP1Q9H875 184 aaPredicted RBP10.47□□□□□ -0.73
TSC1-208ENST00000545250 WRNQ14191 1432 aaPredicted RBP eCLIP10.47□□□□□ -0.73
TSC1-208ENST00000545250 MUM1L1Q5H9M0 696 aa10.47□□□□□ -0.73
TSC1-208ENST00000545250 CTCFLQ8NI51 663 aaPredicted RBP10.47□□□□□ -0.73
TSC1-208ENST00000545250 DNAJC21Q5F1R6 531 aaKnown RBP10.47□□□□□ -0.73
TSC1-208ENST00000545250 ZNF444Q8N0Y2 327 aaPredicted RBP10.47□□□□□ -0.73
TSC1-208ENST00000545250 FKBP4Q02790 459 aaKnown RBP eCLIP10.47□□□□□ -0.73
TSC1-208ENST00000545250 RRP1P56182 461 aaKnown RBP10.47□□□□□ -0.73
TSC1-208ENST00000545250 NLRP5P59047 1200 aa10.47□□□□□ -0.73
TSC1-208ENST00000545250 MVPQ14764 893 aaKnown RBP10.47□□□□□ -0.73
TSC1-208ENST00000545250 PTPN14Q15678 1187 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms