RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 MYH14Q7Z406 1995 aaKnown RBP22.25■■□□□ 1.15
RABGGTA-203ENST00000543002 RPS6KA4O75676 772 aa22.25■■□□□ 1.15
RABGGTA-203ENST00000543002 QSER1Q2KHR3 1735 aa22.25■■□□□ 1.15
RABGGTA-203ENST00000543002 FLAD1Q8NFF5 587 aa22.25■■□□□ 1.15
RABGGTA-203ENST00000543002 RTCBQ9Y3I0 505 aaKnown RBP22.25■■□□□ 1.15
RABGGTA-203ENST00000543002 TUBGCP6Q96RT7 1819 aa22.24■■□□□ 1.15
RABGGTA-203ENST00000543002 SSFA2P28290 1259 aa22.24■■□□□ 1.15
RABGGTA-203ENST00000543002 AMIGO3Q86WK7 504 aa22.24■■□□□ 1.15
RABGGTA-203ENST00000543002 UBR3Q6ZT12 1888 aa22.23■■□□□ 1.15
RABGGTA-203ENST00000543002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.22■■□□□ 1.15
RABGGTA-203ENST00000543002 KRT24Q2M2I5 525 aa22.22■■□□□ 1.15
RABGGTA-203ENST00000543002 TSR2Q969E8 191 aaKnown RBP22.22■■□□□ 1.15
RABGGTA-203ENST00000543002 PDGFDQ9GZP0 370 aaPredicted RBP22.22■■□□□ 1.15
RABGGTA-203ENST00000543002 ZBTB1Q9Y2K1 713 aa22.22■■□□□ 1.15
RABGGTA-203ENST00000543002 PHF14O94880 888 aa22.21■■□□□ 1.15
RABGGTA-203ENST00000543002 A1BGP04217 495 aa22.21■■□□□ 1.15
RABGGTA-203ENST00000543002 SMIM5Q71RC9 77 aa22.21■■□□□ 1.15
RABGGTA-203ENST00000543002 COL23A1Q86Y22 540 aaPredicted RBP22.21■■□□□ 1.15
RABGGTA-203ENST00000543002 SPINK5Q9NQ38 1064 aaPredicted RBP22.21■■□□□ 1.15
RABGGTA-203ENST00000543002 LAMB4A4D0S4 1761 aa22.2■■□□□ 1.14
RABGGTA-203ENST00000543002 HOXB7P09629 217 aa22.2■■□□□ 1.14
RABGGTA-203ENST00000543002 ADRA2BP18089 450 aa22.2■■□□□ 1.14
RABGGTA-203ENST00000543002 SOS1Q07889 1333 aaPredicted RBP22.2■■□□□ 1.14
RABGGTA-203ENST00000543002 CASZ1Q86V15 1759 aa22.19■■□□□ 1.14
RABGGTA-203ENST00000543002 CANXP27824 592 aaKnown RBP22.19■■□□□ 1.14
RABGGTA-203ENST00000543002 HNRNPUQ00839 825 aaKnown RBP eCLIP22.19■■□□□ 1.14
RABGGTA-203ENST00000543002 GOLGA2Q08379 1002 aa22.19■■□□□ 1.14
RABGGTA-203ENST00000543002 TRAPPC3LQ5T215 181 aa22.19■■□□□ 1.14
RABGGTA-203ENST00000543002 MYH16Q9H6N6 1097 aa22.19■■□□□ 1.14
RABGGTA-203ENST00000543002 FANCIQ9NVI1 1328 aa22.19■■□□□ 1.14
RABGGTA-203ENST00000543002 DUSP27Q5VZP5 1158 aa22.18■■□□□ 1.14
RABGGTA-203ENST00000543002 SLC16A10Q8TF71 515 aa22.18■■□□□ 1.14
RABGGTA-203ENST00000543002 MSH5O43196 834 aa22.17■■□□□ 1.14
RABGGTA-203ENST00000543002 IL6STP40189 918 aaPredicted RBP22.17■■□□□ 1.14
RABGGTA-203ENST00000543002 EIF5P55010 431 aaKnown RBP22.17■■□□□ 1.14
RABGGTA-203ENST00000543002 C8orf58Q8NAV2 365 aa22.17■■□□□ 1.14
RABGGTA-203ENST00000543002 ARHGEF1Q92888 912 aaKnown RBP22.17■■□□□ 1.14
RABGGTA-203ENST00000543002 ERBB4Q15303 1308 aa22.16■■□□□ 1.14
RABGGTA-203ENST00000543002 NBPF26B4DH59 902 aa22.15■■□□□ 1.14
RABGGTA-203ENST00000543002 E9PSI1 815 aa22.15■■□□□ 1.14
RABGGTA-203ENST00000543002 EIF2S2P20042 333 aaKnown RBP22.15■■□□□ 1.14
RABGGTA-203ENST00000543002 NBPF10Q6P3W6 841 aaKnown RBP22.15■■□□□ 1.14
RABGGTA-203ENST00000543002 NBPF15Q8N660 670 aa22.15■■□□□ 1.14
RABGGTA-203ENST00000543002 COL15A1P39059 1388 aa22.15■■□□□ 1.14
RABGGTA-203ENST00000543002 ELL2O00472 640 aaPredicted RBP22.14■■□□□ 1.14
RABGGTA-203ENST00000543002 RFC4P35249 363 aa22.14■■□□□ 1.14
RABGGTA-203ENST00000543002 PIP4K2AP48426 406 aaPredicted RBP22.14■■□□□ 1.14
RABGGTA-203ENST00000543002 ZBTB7AO95365 584 aa22.13■■□□□ 1.13
RABGGTA-203ENST00000543002 SLFN5Q08AF3 891 aa22.13■■□□□ 1.13
RABGGTA-203ENST00000543002 TSPYL6Q8N831 410 aa22.13■■□□□ 1.13
RABGGTA-203ENST00000543002 MTFR1LQ9H019 292 aa22.13■■□□□ 1.13
RABGGTA-203ENST00000543002 A0A087WZG4 1122 aa22.12■■□□□ 1.13
RABGGTA-203ENST00000543002 HDGFL1Q5TGJ6 251 aa22.12■■□□□ 1.13
RABGGTA-203ENST00000543002 EXOSC9Q06265 439 aaKnown RBP22.11■■□□□ 1.13
RABGGTA-203ENST00000543002 NPM2Q86SE8 214 aaKnown RBP22.11■■□□□ 1.13
RABGGTA-203ENST00000543002 NECTIN2Q92692 538 aa22.11■■□□□ 1.13
RABGGTA-203ENST00000543002 CDCA7LQ96GN5 454 aa22.11■■□□□ 1.13
RABGGTA-203ENST00000543002 ZNF330Q9Y3S2 320 aaPredicted RBP22.11■■□□□ 1.13
RABGGTA-203ENST00000543002 C4AP0C0L4 1744 aa22.11■■□□□ 1.13
RABGGTA-203ENST00000543002 PDIA6Q15084 440 aa22.1■■□□□ 1.13
RABGGTA-203ENST00000543002 TWISTNBQ3B726 338 aaPredicted RBP22.1■■□□□ 1.13
RABGGTA-203ENST00000543002 CHMP4AQ9BY43 222 aa22.1■■□□□ 1.13
RABGGTA-203ENST00000543002 USP42Q9H9J4 1324 aaKnown RBP22.1■■□□□ 1.13
RABGGTA-203ENST00000543002 TRMT2AQ8IZ69 625 aaKnown RBP22.09■■□□□ 1.13
RABGGTA-203ENST00000543002 SPON1Q9HCB6 807 aa22.09■■□□□ 1.13
RABGGTA-203ENST00000543002 SRP68Q9UHB9 627 aaKnown RBP22.09■■□□□ 1.13
RABGGTA-203ENST00000543002 NARFQ9UHQ1 456 aa22.09■■□□□ 1.13
RABGGTA-203ENST00000543002 ATF5Q9Y2D1 282 aaPredicted RBP22.09■■□□□ 1.13
RABGGTA-203ENST00000543002 ZPR1O75312 459 aa22.08■■□□□ 1.13
RABGGTA-203ENST00000543002 MYL6BP14649 208 aa22.08■■□□□ 1.13
RABGGTA-203ENST00000543002 ZBED9Q6R2W3 1325 aa22.08■■□□□ 1.13
RABGGTA-203ENST00000543002 DDX21Q9NR30 783 aaKnown RBP eCLIP22.08■■□□□ 1.13
RABGGTA-203ENST00000543002 GYS1P13807 737 aa22.07■■□□□ 1.12
RABGGTA-203ENST00000543002 PROSER3Q2NL68 480 aa22.07■■□□□ 1.12
RABGGTA-203ENST00000543002 LRP10Q7Z4F1 713 aa22.07■■□□□ 1.12
RABGGTA-203ENST00000543002 DZIP3Q86Y13 1208 aaKnown RBP22.07■■□□□ 1.12
RABGGTA-203ENST00000543002 CHPF2Q9P2E5 772 aa22.07■■□□□ 1.12
RABGGTA-203ENST00000543002 DBF4Q9UBU7 674 aaPredicted RBP22.07■■□□□ 1.12
RABGGTA-203ENST00000543002 TBC1D2BQ9UPU7 963 aa22.07■■□□□ 1.12
RABGGTA-203ENST00000543002 VAMP4O75379 141 aa22.06■■□□□ 1.12
RABGGTA-203ENST00000543002 CCDC30Q5VVM6 783 aa22.06■■□□□ 1.12
RABGGTA-203ENST00000543002 USPL1Q5W0Q7 1092 aa22.06■■□□□ 1.12
RABGGTA-203ENST00000543002 MSL1Q68DK7 614 aa22.06■■□□□ 1.12
RABGGTA-203ENST00000543002 NLGN1Q8N2Q7 840 aa22.06■■□□□ 1.12
RABGGTA-203ENST00000543002 ANXA1P04083 346 aa22.06■■□□□ 1.12
RABGGTA-203ENST00000543002 ARXQ96QS3 562 aa22.06■■□□□ 1.12
RABGGTA-203ENST00000543002 COL24A1Q17RW2 1714 aa22.05■■□□□ 1.12
RABGGTA-203ENST00000543002 PTGER2P43116 358 aa22.05■■□□□ 1.12
RABGGTA-203ENST00000543002 SGIP1Q9BQI5 828 aa22.05■■□□□ 1.12
RABGGTA-203ENST00000543002 CAMTA2O94983 1202 aa22.04■■□□□ 1.12
RABGGTA-203ENST00000543002 BCL2L12Q9HB09 334 aa22.04■■□□□ 1.12
RABGGTA-203ENST00000543002 HYPKQ9NX55 129 aa22.04■■□□□ 1.12
RABGGTA-203ENST00000543002 FKBP8Q14318 412 aa22.03■■□□□ 1.12
RABGGTA-203ENST00000543002 TTLL7Q6ZT98 887 aa22.03■■□□□ 1.12
RABGGTA-203ENST00000543002 RGL2O15211 777 aa22.02■■□□□ 1.12
RABGGTA-203ENST00000543002 POLD1P28340 1107 aa22.02■■□□□ 1.12
RABGGTA-203ENST00000543002 LRP5O75197 1615 aa22.01■■□□□ 1.11
RABGGTA-203ENST00000543002 KIF6Q6ZMV9 814 aa22.01■■□□□ 1.11
RABGGTA-203ENST00000543002 COPS6Q7L5N1 327 aa22.01■■□□□ 1.11
RABGGTA-203ENST00000543002 XAGE3Q8WTP9 111 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms