RNA–Protein interactions for RNA: ENST00000539711.2

NIPA2-205, Transcript of NIPA magnesium transporter 2, human

TSL 2 BASIC

Gene NIPA2, Length 1,412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIPA2-205	ENST00000539711	USP16	Q9Y5T5	823 aa		28.83	■■■□□ 2.21
NIPA2-205	ENST00000539711	IL16	Q14005	1332 aa		28.83	■■■□□ 2.21
NIPA2-205	ENST00000539711	ZNF521	Q96K83	1311 aa		28.83	■■■□□ 2.21
NIPA2-205	ENST00000539711	GIGYF1	O75420	1035 aa	Predicted RBP	28.82	■■■□□ 2.2
NIPA2-205	ENST00000539711	INTS5	Q6P9B9	1019 aa	Known RBP	28.82	■■■□□ 2.2
NIPA2-205	ENST00000539711	LAMB4	A4D0S4	1761 aa		28.81	■■■□□ 2.2
NIPA2-205	ENST00000539711	GNPAT	O15228	680 aa		28.81	■■■□□ 2.2
NIPA2-205	ENST00000539711	SMIM5	Q71RC9	77 aa		28.81	■■■□□ 2.2
NIPA2-205	ENST00000539711	STARD3NL	O95772	234 aa		28.8	■■■□□ 2.2
NIPA2-205	ENST00000539711	KRT24	Q2M2I5	525 aa		28.79	■■■□□ 2.2
NIPA2-205	ENST00000539711	CCDC87	Q9NVE4	849 aa		28.79	■■■□□ 2.2
NIPA2-205	ENST00000539711	COL23A1	Q86Y22	540 aa	Predicted RBP	28.78	■■■□□ 2.2
NIPA2-205	ENST00000539711	FLAD1	Q8NFF5	587 aa		28.78	■■■□□ 2.2
NIPA2-205	ENST00000539711	RPS6KA4	O75676	772 aa		28.77	■■■□□ 2.2
NIPA2-205	ENST00000539711	TSR2	Q969E8	191 aa	Known RBP	28.77	■■■□□ 2.2
NIPA2-205	ENST00000539711	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28.77	■■■□□ 2.2
NIPA2-205	ENST00000539711	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	28.77	■■■□□ 2.2
NIPA2-205	ENST00000539711	PHF14	O94880	888 aa		28.77	■■■□□ 2.2
NIPA2-205	ENST00000539711	SSFA2	P28290	1259 aa		28.77	■■■□□ 2.2
NIPA2-205	ENST00000539711	ZBTB1	Q9Y2K1	713 aa		28.77	■■■□□ 2.2
NIPA2-205	ENST00000539711	RTCB	Q9Y3I0	505 aa	Known RBP	28.77	■■■□□ 2.2
NIPA2-205	ENST00000539711	ZBTB7A	O95365	584 aa		28.76	■■■□□ 2.19
NIPA2-205	ENST00000539711	A1BG	P04217	495 aa		28.76	■■■□□ 2.19
NIPA2-205	ENST00000539711	MSH5	O43196	834 aa		28.75	■■■□□ 2.19
NIPA2-205	ENST00000539711	LRP5	O75197	1615 aa		28.74	■■■□□ 2.19
NIPA2-205	ENST00000539711	CANX	P27824	592 aa	Known RBP	28.73	■■■□□ 2.19
NIPA2-205	ENST00000539711	SLC16A10	Q8TF71	515 aa		28.73	■■■□□ 2.19
NIPA2-205	ENST00000539711	HNRNPU	Q00839	825 aa	Known RBP eCLIP	28.72	■■■□□ 2.19
NIPA2-205	ENST00000539711	MTFR1L	Q9H019	292 aa		28.72	■■■□□ 2.19
NIPA2-205	ENST00000539711	SPON1	Q9HCB6	807 aa		28.72	■■■□□ 2.19
NIPA2-205	ENST00000539711	C4A	P0C0L4	1744 aa		28.71	■■■□□ 2.19
NIPA2-205	ENST00000539711	SOS1	Q07889	1333 aa	Predicted RBP	28.71	■■■□□ 2.19
NIPA2-205	ENST00000539711	FANCI	Q9NVI1	1328 aa		28.71	■■■□□ 2.19
NIPA2-205	ENST00000539711	PIP4K2A	P48426	406 aa	Predicted RBP	28.71	■■■□□ 2.19
NIPA2-205	ENST00000539711	GOLGA2	Q08379	1002 aa		28.7	■■■□□ 2.19
NIPA2-205	ENST00000539711	TRAPPC3L	Q5T215	181 aa		28.7	■■■□□ 2.19
NIPA2-205	ENST00000539711	DUSP27	Q5VZP5	1158 aa		28.7	■■■□□ 2.19
NIPA2-205	ENST00000539711	C8orf58	Q8NAV2	365 aa		28.7	■■■□□ 2.19
NIPA2-205	ENST00000539711	ATF5	Q9Y2D1	282 aa	Predicted RBP	28.7	■■■□□ 2.19
NIPA2-205	ENST00000539711	ADRA2B	P18089	450 aa		28.69	■■■□□ 2.18
NIPA2-205	ENST00000539711	EIF2S2	P20042	333 aa	Known RBP	28.69	■■■□□ 2.18
NIPA2-205	ENST00000539711	ARHGEF1	Q92888	912 aa	Known RBP	28.69	■■■□□ 2.18
NIPA2-205	ENST00000539711	NBPF26	B4DH59	902 aa		28.68	■■■□□ 2.18
NIPA2-205	ENST00000539711	ELL2	O00472	640 aa	Predicted RBP	28.68	■■■□□ 2.18
NIPA2-205	ENST00000539711	HOXB7	P09629	217 aa		28.68	■■■□□ 2.18
NIPA2-205	ENST00000539711	EIF5	P55010	431 aa	Known RBP	28.68	■■■□□ 2.18
NIPA2-205	ENST00000539711	NBPF10	Q6P3W6	841 aa	Known RBP	28.68	■■■□□ 2.18
NIPA2-205	ENST00000539711	NBPF15	Q8N660	670 aa		28.68	■■■□□ 2.18
NIPA2-205	ENST00000539711	MYH16	Q9H6N6	1097 aa		28.68	■■■□□ 2.18
NIPA2-205	ENST00000539711	COL24A1	Q17RW2	1714 aa		28.68	■■■□□ 2.18
NIPA2-205	ENST00000539711	TSPYL6	Q8N831	410 aa		28.67	■■■□□ 2.18
NIPA2-205	ENST00000539711	COL15A1	P39059	1388 aa		28.66	■■■□□ 2.18
NIPA2-205	ENST00000539711	IL6ST	P40189	918 aa	Predicted RBP	28.66	■■■□□ 2.18
NIPA2-205	ENST00000539711	NECTIN2	Q92692	538 aa		28.66	■■■□□ 2.18
NIPA2-205	ENST00000539711	CDCA7L	Q96GN5	454 aa		28.66	■■■□□ 2.18
NIPA2-205	ENST00000539711	RFC4	P35249	363 aa		28.64	■■■□□ 2.18
NIPA2-205	ENST00000539711	SLFN5	Q08AF3	891 aa		28.64	■■■□□ 2.18
NIPA2-205	ENST00000539711	ZNF330	Q9Y3S2	320 aa	Predicted RBP	28.64	■■■□□ 2.18
NIPA2-205	ENST00000539711		E9PSI1	815 aa		28.63	■■■□□ 2.17
NIPA2-205	ENST00000539711	PTGER2	P43116	358 aa		28.63	■■■□□ 2.17
NIPA2-205	ENST00000539711	EXOSC9	Q06265	439 aa	Known RBP	28.62	■■■□□ 2.17
NIPA2-205	ENST00000539711	HDGFL1	Q5TGJ6	251 aa		28.62	■■■□□ 2.17
NIPA2-205	ENST00000539711	ERBB4	Q15303	1308 aa		28.62	■■■□□ 2.17
NIPA2-205	ENST00000539711	PDIA6	Q15084	440 aa		28.61	■■■□□ 2.17
NIPA2-205	ENST00000539711	MSL1	Q68DK7	614 aa		28.61	■■■□□ 2.17
NIPA2-205	ENST00000539711	SGIP1	Q9BQI5	828 aa		28.61	■■■□□ 2.17
NIPA2-205	ENST00000539711	MYL6B	P14649	208 aa		28.6	■■■□□ 2.17
NIPA2-205	ENST00000539711	TWISTNB	Q3B726	338 aa	Predicted RBP	28.6	■■■□□ 2.17
NIPA2-205	ENST00000539711	SRP68	Q9UHB9	627 aa	Known RBP	28.6	■■■□□ 2.17
NIPA2-205	ENST00000539711	USP42	Q9H9J4	1324 aa	Known RBP	28.59	■■■□□ 2.17
NIPA2-205	ENST00000539711		A0A087WZG4	1122 aa		28.59	■■■□□ 2.17
NIPA2-205	ENST00000539711	ANXA1	P04083	346 aa		28.59	■■■□□ 2.17
NIPA2-205	ENST00000539711	PROSER3	Q2NL68	480 aa		28.59	■■■□□ 2.17
NIPA2-205	ENST00000539711	NPM2	Q86SE8	214 aa	Known RBP	28.58	■■■□□ 2.17
NIPA2-205	ENST00000539711	TRMT2A	Q8IZ69	625 aa	Known RBP	28.58	■■■□□ 2.17
NIPA2-205	ENST00000539711	NARF	Q9UHQ1	456 aa		28.58	■■■□□ 2.17
NIPA2-205	ENST00000539711	TBC1D2B	Q9UPU7	963 aa		28.58	■■■□□ 2.17
NIPA2-205	ENST00000539711	GYS1	P13807	737 aa		28.57	■■■□□ 2.16
NIPA2-205	ENST00000539711	POLD1	P28340	1107 aa		28.57	■■■□□ 2.16
NIPA2-205	ENST00000539711	LRP10	Q7Z4F1	713 aa		28.57	■■■□□ 2.16
NIPA2-205	ENST00000539711	CHPF2	Q9P2E5	772 aa		28.57	■■■□□ 2.16
NIPA2-205	ENST00000539711	ZBED9	Q6R2W3	1325 aa		28.57	■■■□□ 2.16
NIPA2-205	ENST00000539711	ZPR1	O75312	459 aa		28.56	■■■□□ 2.16
NIPA2-205	ENST00000539711	USPL1	Q5W0Q7	1092 aa		28.56	■■■□□ 2.16
NIPA2-205	ENST00000539711	DZIP3	Q86Y13	1208 aa	Known RBP	28.56	■■■□□ 2.16
NIPA2-205	ENST00000539711	ARX	Q96QS3	562 aa		28.56	■■■□□ 2.16
NIPA2-205	ENST00000539711	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.56	■■■□□ 2.16
NIPA2-205	ENST00000539711	PPP1R1B	Q9UD71	204 aa	Predicted RBP	28.56	■■■□□ 2.16
NIPA2-205	ENST00000539711	VAMP4	O75379	141 aa		28.55	■■■□□ 2.16
NIPA2-205	ENST00000539711	SCN7A	Q01118	1682 aa		28.54	■■■□□ 2.16
NIPA2-205	ENST00000539711	BCOR	Q6W2J9	1755 aa		28.54	■■■□□ 2.16
NIPA2-205	ENST00000539711	DBF4	Q9UBU7	674 aa	Predicted RBP	28.54	■■■□□ 2.16
NIPA2-205	ENST00000539711	NLGN1	Q8N2Q7	840 aa		28.53	■■■□□ 2.16
NIPA2-205	ENST00000539711	BCL2L12	Q9HB09	334 aa		28.53	■■■□□ 2.16
NIPA2-205	ENST00000539711	CCDC30	Q5VVM6	783 aa		28.52	■■■□□ 2.16
NIPA2-205	ENST00000539711	CAMTA2	O94983	1202 aa		28.52	■■■□□ 2.16
NIPA2-205	ENST00000539711	FKBP8	Q14318	412 aa		28.52	■■■□□ 2.16
NIPA2-205	ENST00000539711	TTLL7	Q6ZT98	887 aa		28.52	■■■□□ 2.16
NIPA2-205	ENST00000539711	TCERG1	O14776	1098 aa	Known RBP	28.51	■■■□□ 2.15
NIPA2-205	ENST00000539711	CHMP4A	Q9BY43	222 aa		28.51	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms