RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 GNAI1P63096 354 aa22.64■■□□□ 1.21
SLC3A2-213ENST00000539458 SALL2Q9Y467 1007 aaPredicted RBP22.64■■□□□ 1.21
SLC3A2-213ENST00000539458 CCDC87Q9NVE4 849 aa22.63■■□□□ 1.21
SLC3A2-213ENST00000539458 IL16Q14005 1332 aa22.62■■□□□ 1.21
SLC3A2-213ENST00000539458 STARD3NLO95772 234 aa22.62■■□□□ 1.21
SLC3A2-213ENST00000539458 SSFA2P28290 1259 aa22.62■■□□□ 1.21
SLC3A2-213ENST00000539458 FLAD1Q8NFF5 587 aa22.62■■□□□ 1.21
SLC3A2-213ENST00000539458 ATF5Q9Y2D1 282 aaPredicted RBP22.62■■□□□ 1.21
SLC3A2-213ENST00000539458 GIGYF1O75420 1035 aaPredicted RBP22.61■■□□□ 1.21
SLC3A2-213ENST00000539458 INTS5Q6P9B9 1019 aaKnown RBP22.61■■□□□ 1.21
SLC3A2-213ENST00000539458 WDR63Q8IWG1 891 aa22.61■■□□□ 1.21
SLC3A2-213ENST00000539458 MBIPQ9NS73 344 aa22.61■■□□□ 1.21
SLC3A2-213ENST00000539458 RTCBQ9Y3I0 505 aaKnown RBP22.61■■□□□ 1.21
SLC3A2-213ENST00000539458 MYH14Q7Z406 1995 aaKnown RBP22.61■■□□□ 1.21
SLC3A2-213ENST00000539458 PRAMEF22A3QJZ6 481 aa22.6■■□□□ 1.21
SLC3A2-213ENST00000539458 RPS6KA4O75676 772 aa22.6■■□□□ 1.21
SLC3A2-213ENST00000539458 AMIGO3Q86WK7 504 aa22.6■■□□□ 1.21
SLC3A2-213ENST00000539458 PDGFDQ9GZP0 370 aaPredicted RBP22.6■■□□□ 1.21
SLC3A2-213ENST00000539458 COL23A1Q86Y22 540 aaPredicted RBP22.59■■□□□ 1.21
SLC3A2-213ENST00000539458 USP16Q9Y5T5 823 aa22.59■■□□□ 1.21
SLC3A2-213ENST00000539458 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.58■■□□□ 1.21
SLC3A2-213ENST00000539458 PHF14O94880 888 aa22.58■■□□□ 1.21
SLC3A2-213ENST00000539458 ADRA2BP18089 450 aa22.58■■□□□ 1.21
SLC3A2-213ENST00000539458 MTFR1LQ9H019 292 aa22.58■■□□□ 1.21
SLC3A2-213ENST00000539458 ZBTB1Q9Y2K1 713 aa22.58■■□□□ 1.21
SLC3A2-213ENST00000539458 ZNF521Q96K83 1311 aa22.57■■□□□ 1.2
SLC3A2-213ENST00000539458 TRAPPC3LQ5T215 181 aa22.56■■□□□ 1.2
SLC3A2-213ENST00000539458 SMIM5Q71RC9 77 aa22.56■■□□□ 1.2
SLC3A2-213ENST00000539458 SLC16A10Q8TF71 515 aa22.56■■□□□ 1.2
SLC3A2-213ENST00000539458 C4AP0C0L4 1744 aa22.56■■□□□ 1.2
SLC3A2-213ENST00000539458 SOS1Q07889 1333 aaPredicted RBP22.56■■□□□ 1.2
SLC3A2-213ENST00000539458 MSH5O43196 834 aa22.55■■□□□ 1.2
SLC3A2-213ENST00000539458 PTGER2P43116 358 aa22.55■■□□□ 1.2
SLC3A2-213ENST00000539458 A1BGP04217 495 aa22.54■■□□□ 1.2
SLC3A2-213ENST00000539458 CANXP27824 592 aaKnown RBP22.54■■□□□ 1.2
SLC3A2-213ENST00000539458 COL15A1P39059 1388 aa22.53■■□□□ 1.2
SLC3A2-213ENST00000539458 HOXB7P09629 217 aa22.53■■□□□ 1.2
SLC3A2-213ENST00000539458 KRT24Q2M2I5 525 aa22.53■■□□□ 1.2
SLC3A2-213ENST00000539458 ARHGEF1Q92888 912 aaKnown RBP22.53■■□□□ 1.2
SLC3A2-213ENST00000539458 TSR2Q969E8 191 aaKnown RBP22.53■■□□□ 1.2
SLC3A2-213ENST00000539458 IL6STP40189 918 aaPredicted RBP22.52■■□□□ 1.2
SLC3A2-213ENST00000539458 SYT17Q9BSW7 474 aa22.52■■□□□ 1.2
SLC3A2-213ENST00000539458 FHDC1Q9C0D6 1143 aaPredicted RBP22.52■■□□□ 1.2
SLC3A2-213ENST00000539458 COL24A1Q17RW2 1714 aa22.51■■□□□ 1.19
SLC3A2-213ENST00000539458 EIF5P55010 431 aaKnown RBP22.51■■□□□ 1.19
SLC3A2-213ENST00000539458 ERBB4Q15303 1308 aa22.51■■□□□ 1.19
SLC3A2-213ENST00000539458 FANCIQ9NVI1 1328 aa22.51■■□□□ 1.19
SLC3A2-213ENST00000539458 RFC4P35249 363 aa22.5■■□□□ 1.19
SLC3A2-213ENST00000539458 MYH16Q9H6N6 1097 aa22.5■■□□□ 1.19
SLC3A2-213ENST00000539458 NBPF26B4DH59 902 aa22.49■■□□□ 1.19
SLC3A2-213ENST00000539458 GOLGA2Q08379 1002 aa22.49■■□□□ 1.19
SLC3A2-213ENST00000539458 DUSP27Q5VZP5 1158 aa22.49■■□□□ 1.19
SLC3A2-213ENST00000539458 NBPF10Q6P3W6 841 aaKnown RBP22.49■■□□□ 1.19
SLC3A2-213ENST00000539458 NBPF15Q8N660 670 aa22.49■■□□□ 1.19
SLC3A2-213ENST00000539458 ARXQ96QS3 562 aa22.49■■□□□ 1.19
SLC3A2-213ENST00000539458 SPINK5Q9NQ38 1064 aaPredicted RBP22.49■■□□□ 1.19
SLC3A2-213ENST00000539458 A0A087WZG4 1122 aa22.48■■□□□ 1.19
SLC3A2-213ENST00000539458 PIP4K2AP48426 406 aaPredicted RBP22.48■■□□□ 1.19
SLC3A2-213ENST00000539458 USP42Q9H9J4 1324 aaKnown RBP22.48■■□□□ 1.19
SLC3A2-213ENST00000539458 EIF2S2P20042 333 aaKnown RBP22.47■■□□□ 1.19
SLC3A2-213ENST00000539458 NPM2Q86SE8 214 aaKnown RBP22.47■■□□□ 1.19
SLC3A2-213ENST00000539458 C8orf58Q8NAV2 365 aa22.47■■□□□ 1.19
SLC3A2-213ENST00000539458 ZNF330Q9Y3S2 320 aaPredicted RBP22.47■■□□□ 1.19
SLC3A2-213ENST00000539458 SCN7AQ01118 1682 aa22.46■■□□□ 1.19
SLC3A2-213ENST00000539458 HNRNPUQ00839 825 aaKnown RBP eCLIP22.46■■□□□ 1.19
SLC3A2-213ENST00000539458 HDGFL1Q5TGJ6 251 aa22.46■■□□□ 1.19
SLC3A2-213ENST00000539458 NARFQ9UHQ1 456 aa22.45■■□□□ 1.18
SLC3A2-213ENST00000539458 E9PSI1 815 aa22.44■■□□□ 1.18
SLC3A2-213ENST00000539458 ELL2O00472 640 aaPredicted RBP22.44■■□□□ 1.18
SLC3A2-213ENST00000539458 ZPR1O75312 459 aa22.44■■□□□ 1.18
SLC3A2-213ENST00000539458 GYS1P13807 737 aa22.44■■□□□ 1.18
SLC3A2-213ENST00000539458 POLD1P28340 1107 aa22.44■■□□□ 1.18
SLC3A2-213ENST00000539458 MSL1Q68DK7 614 aa22.44■■□□□ 1.18
SLC3A2-213ENST00000539458 TSPYL6Q8N831 410 aa22.44■■□□□ 1.18
SLC3A2-213ENST00000539458 SGIP1Q9BQI5 828 aa22.44■■□□□ 1.18
SLC3A2-213ENST00000539458 SRP68Q9UHB9 627 aaKnown RBP22.44■■□□□ 1.18
SLC3A2-213ENST00000539458 BCORQ6W2J9 1755 aa22.43■■□□□ 1.18
SLC3A2-213ENST00000539458 PDIA6Q15084 440 aa22.43■■□□□ 1.18
SLC3A2-213ENST00000539458 ZNF784Q8NCA9 323 aaPredicted RBP22.43■■□□□ 1.18
SLC3A2-213ENST00000539458 NECTIN2Q92692 538 aa22.43■■□□□ 1.18
SLC3A2-213ENST00000539458 CHMP4AQ9BY43 222 aa22.43■■□□□ 1.18
SLC3A2-213ENST00000539458 MYL6BP14649 208 aa22.42■■□□□ 1.18
SLC3A2-213ENST00000539458 SLFN5Q08AF3 891 aa22.42■■□□□ 1.18
SLC3A2-213ENST00000539458 TWISTNBQ3B726 338 aaPredicted RBP22.42■■□□□ 1.18
SLC3A2-213ENST00000539458 USPL1Q5W0Q7 1092 aa22.42■■□□□ 1.18
SLC3A2-213ENST00000539458 DZIP3Q86Y13 1208 aaKnown RBP22.42■■□□□ 1.18
SLC3A2-213ENST00000539458 NLGN1Q8N2Q7 840 aa22.42■■□□□ 1.18
SLC3A2-213ENST00000539458 EXOSC9Q06265 439 aaKnown RBP22.41■■□□□ 1.18
SLC3A2-213ENST00000539458 GPR162Q16538 588 aa22.41■■□□□ 1.18
SLC3A2-213ENST00000539458 KLHL34Q8N239 644 aa22.41■■□□□ 1.18
SLC3A2-213ENST00000539458 DDX21Q9NR30 783 aaKnown RBP eCLIP22.41■■□□□ 1.18
SLC3A2-213ENST00000539458 DBF4Q9UBU7 674 aaPredicted RBP22.41■■□□□ 1.18
SLC3A2-213ENST00000539458 TBC1D2BQ9UPU7 963 aa22.41■■□□□ 1.18
SLC3A2-213ENST00000539458 PROSER3Q2NL68 480 aa22.4■■□□□ 1.18
SLC3A2-213ENST00000539458 LRP10Q7Z4F1 713 aa22.4■■□□□ 1.18
SLC3A2-213ENST00000539458 CHPF2Q9P2E5 772 aa22.4■■□□□ 1.18
SLC3A2-213ENST00000539458 CHD4Q14839 1912 aa22.39■■□□□ 1.18
SLC3A2-213ENST00000539458 CDCA7LQ96GN5 454 aa22.39■■□□□ 1.17
SLC3A2-213ENST00000539458 BCL2L12Q9HB09 334 aa22.39■■□□□ 1.17
SLC3A2-213ENST00000539458 CAMTA2O94983 1202 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms