RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 PPP1R42Q7Z4L9 355 aa12.41□□□□□ -0.42
DDB1-204ENST00000535147 SRCIN1Q9C0H9 1055 aa12.41□□□□□ -0.42
DDB1-204ENST00000535147 FAM13BQ9NYF5 915 aa12.41□□□□□ -0.42
DDB1-204ENST00000535147 SOS1Q07889 1333 aaPredicted RBP12.41□□□□□ -0.42
DDB1-204ENST00000535147 PTMAP06454 111 aaKnown RBP12.41□□□□□ -0.42
DDB1-204ENST00000535147 CCDC39Q9UFE4 941 aa12.41□□□□□ -0.42
DDB1-204ENST00000535147 TUBGCP6Q96RT7 1819 aa12.41□□□□□ -0.42
DDB1-204ENST00000535147 NALCNQ8IZF0 1738 aa12.41□□□□□ -0.42
DDB1-204ENST00000535147 NLRP6P59044 892 aa12.41□□□□□ -0.42
DDB1-204ENST00000535147 HDGFL1Q5TGJ6 251 aa12.41□□□□□ -0.42
DDB1-204ENST00000535147 USHBP1Q8N6Y0 703 aa12.41□□□□□ -0.42
DDB1-204ENST00000535147 ZMYND15Q9H091 742 aa12.41□□□□□ -0.42
DDB1-204ENST00000535147 PDCL3Q9H2J4 239 aa12.41□□□□□ -0.42
DDB1-204ENST00000535147 CPA1P15085 419 aa12.4□□□□□ -0.42
DDB1-204ENST00000535147 EIF2S2P20042 333 aaKnown RBP12.4□□□□□ -0.42
DDB1-204ENST00000535147 RASEFQ8IZ41 740 aa12.4□□□□□ -0.42
DDB1-204ENST00000535147 SSH3Q8TE77 659 aa12.4□□□□□ -0.42
DDB1-204ENST00000535147 CNPY2Q9Y2B0 182 aa12.4□□□□□ -0.42
DDB1-204ENST00000535147 TCHHQ07283 1943 aa12.4□□□□□ -0.42
DDB1-204ENST00000535147 WDR33Q9C0J8 1336 aaKnown RBP12.4□□□□□ -0.42
DDB1-204ENST00000535147 UQCRHLA0A096LP55 91 aa12.4□□□□□ -0.43
DDB1-204ENST00000535147 UQCRHP07919 91 aa12.4□□□□□ -0.43
DDB1-204ENST00000535147 NBPF7P0C2Y1 421 aaPredicted RBP12.4□□□□□ -0.43
DDB1-204ENST00000535147 PDIA4P13667 645 aaKnown RBP12.4□□□□□ -0.43
DDB1-204ENST00000535147 PI4K2BQ8TCG2 481 aa12.4□□□□□ -0.43
DDB1-204ENST00000535147 SYAP1Q96A49 352 aaPredicted RBP12.4□□□□□ -0.43
DDB1-204ENST00000535147 SPG7Q9UQ90 795 aa12.4□□□□□ -0.43
DDB1-204ENST00000535147 SRGAP3O43295 1099 aa12.39□□□□□ -0.43
DDB1-204ENST00000535147 RHPN1Q8TCX5 695 aa12.39□□□□□ -0.43
DDB1-204ENST00000535147 AMOTL2Q9Y2J4 779 aa12.39□□□□□ -0.43
DDB1-204ENST00000535147 SNX14Q9Y5W7 946 aa12.39□□□□□ -0.43
DDB1-204ENST00000535147 PTPRUQ92729 1446 aa12.39□□□□□ -0.43
DDB1-204ENST00000535147 RPAP1Q9BWH6 1393 aaPredicted RBP12.39□□□□□ -0.43
DDB1-204ENST00000535147 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
DDB1-204ENST00000535147 TOPAZ1Q8N9V7 1692 aa12.39□□□□□ -0.43
DDB1-204ENST00000535147 TAF7Q15545 349 aaPredicted RBP12.39□□□□□ -0.43
DDB1-204ENST00000535147 DIP2BQ9P265 1576 aa12.39□□□□□ -0.43
DDB1-204ENST00000535147 XRN1Q8IZH2 1706 aaKnown RBP12.39□□□□□ -0.43
DDB1-204ENST00000535147 SGSM2O43147 1006 aa12.38□□□□□ -0.43
DDB1-204ENST00000535147 AK2P54819 239 aa12.38□□□□□ -0.43
DDB1-204ENST00000535147 CWC27Q6UX04 472 aaKnown RBP12.38□□□□□ -0.43
DDB1-204ENST00000535147 ZNF830Q96NB3 372 aaPredicted RBP12.38□□□□□ -0.43
DDB1-204ENST00000535147 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDB1-204ENST00000535147 ANXA1P04083 346 aa12.38□□□□□ -0.43
DDB1-204ENST00000535147 TERF1P54274 439 aa12.38□□□□□ -0.43
DDB1-204ENST00000535147 IL17RAQ96F46 866 aa12.38□□□□□ -0.43
DDB1-204ENST00000535147 USP25Q9UHP3 1055 aa12.38□□□□□ -0.43
DDB1-204ENST00000535147 RAD50Q92878 1312 aa12.38□□□□□ -0.43
DDB1-204ENST00000535147 HTATSF1O43719 755 aaKnown RBP12.37□□□□□ -0.43
DDB1-204ENST00000535147 HOXC9P31274 260 aa12.37□□□□□ -0.43
DDB1-204ENST00000535147 ARID3AQ99856 593 aa12.37□□□□□ -0.43
DDB1-204ENST00000535147 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
DDB1-204ENST00000535147 FAM208AQ9UK61 1670 aaKnown RBP12.37□□□□□ -0.43
DDB1-204ENST00000535147 MCM5P33992 734 aa12.37□□□□□ -0.43
DDB1-204ENST00000535147 CEBPAP49715 358 aaPredicted RBP12.37□□□□□ -0.43
DDB1-204ENST00000535147 RUFY3Q7L099 469 aa12.37□□□□□ -0.43
DDB1-204ENST00000535147 LSG1Q9H089 658 aaKnown RBP12.37□□□□□ -0.43
DDB1-204ENST00000535147 FMN2Q9NZ56 1722 aa12.37□□□□□ -0.43
DDB1-204ENST00000535147 MAP3K5Q99683 1374 aa12.37□□□□□ -0.43
DDB1-204ENST00000535147 AOX1Q06278 1338 aa12.37□□□□□ -0.43
DDB1-204ENST00000535147 FIBPO43427 364 aa12.36□□□□□ -0.43
DDB1-204ENST00000535147 LARGE1O95461 756 aa12.36□□□□□ -0.43
DDB1-204ENST00000535147 HCLS1P14317 486 aaPredicted RBP12.36□□□□□ -0.43
DDB1-204ENST00000535147 SYT1P21579 422 aa12.36□□□□□ -0.43
DDB1-204ENST00000535147 DDX54Q8TDD1 881 aaKnown RBP12.36□□□□□ -0.43
DDB1-204ENST00000535147 TTC14Q96N46 770 aa12.36□□□□□ -0.43
DDB1-204ENST00000535147 POLA2Q14181 598 aa12.36□□□□□ -0.43
DDB1-204ENST00000535147 CSPP1Q1MSJ5 1256 aa12.36□□□□□ -0.43
DDB1-204ENST00000535147 PHF14O94880 888 aa12.35□□□□□ -0.43
DDB1-204ENST00000535147 ZSCAN22P10073 491 aaPredicted RBP12.35□□□□□ -0.43
DDB1-204ENST00000535147 KIF1BPQ96EK5 621 aa12.35□□□□□ -0.43
DDB1-204ENST00000535147 PI4KAP2A4QPH2 592 aa12.35□□□□□ -0.43
DDB1-204ENST00000535147 STX6O43752 255 aa12.35□□□□□ -0.43
DDB1-204ENST00000535147 RAB11FIP3O75154 756 aa12.35□□□□□ -0.43
DDB1-204ENST00000535147 CASTP20810 708 aaKnown RBP12.35□□□□□ -0.43
DDB1-204ENST00000535147 PI4KAP1Q8N8J0 262 aa12.35□□□□□ -0.43
DDB1-204ENST00000535147 CHPF2Q9P2E5 772 aa12.35□□□□□ -0.43
DDB1-204ENST00000535147 LIMCH1Q9UPQ0 1083 aa12.35□□□□□ -0.43
DDB1-204ENST00000535147 KCNQ3O43525 872 aa12.35□□□□□ -0.43
DDB1-204ENST00000535147 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
DDB1-204ENST00000535147 C17orf53Q8N3J3 647 aaPredicted RBP12.35□□□□□ -0.43
DDB1-204ENST00000535147 PLEKHG1Q9ULL1 1385 aa12.34□□□□□ -0.43
DDB1-204ENST00000535147 ZBTB22O15209 634 aa12.34□□□□□ -0.43
DDB1-204ENST00000535147 KIAA2012Q0VF49 1180 aa12.34□□□□□ -0.43
DDB1-204ENST00000535147 CCDC183Q5T5S1 534 aa12.34□□□□□ -0.43
DDB1-204ENST00000535147 UBR1Q8IWV7 1749 aa12.34□□□□□ -0.43
DDB1-204ENST00000535147 JARID2Q92833 1246 aaPredicted RBP12.34□□□□□ -0.43
DDB1-204ENST00000535147 TTC12Q9H892 705 aaPredicted RBP12.34□□□□□ -0.43
DDB1-204ENST00000535147 LGR6Q9HBX8 967 aa12.34□□□□□ -0.43
DDB1-204ENST00000535147 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
DDB1-204ENST00000535147 PTH1RQ03431 593 aa12.34□□□□□ -0.43
DDB1-204ENST00000535147 OS9Q13438 667 aaPredicted RBP12.34□□□□□ -0.43
DDB1-204ENST00000535147 ADCK5Q3MIX3 580 aa12.34□□□□□ -0.43
DDB1-204ENST00000535147 CCDC83Q8IWF9 413 aa12.34□□□□□ -0.43
DDB1-204ENST00000535147 ABTB2Q8N961 1025 aa12.34□□□□□ -0.43
DDB1-204ENST00000535147 RGPD8O14715 1765 aaPredicted RBP12.33□□□□□ -0.44
DDB1-204ENST00000535147 ADCY5O95622 1261 aa12.33□□□□□ -0.44
DDB1-204ENST00000535147 F13A1P00488 732 aa12.33□□□□□ -0.44
DDB1-204ENST00000535147 DNTTIP2Q5QJE6 756 aaKnown RBP12.33□□□□□ -0.44
DDB1-204ENST00000535147 TMEM87AQ8NBN3 555 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms