RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CCDC125Q86Z20 511 aa15.73■□□□□ 0.11
SCARB1-204ENST00000535005 SSH1Q8WYL5 1049 aa15.73■□□□□ 0.11
SCARB1-204ENST00000535005 C5P01031 1676 aa15.73■□□□□ 0.11
SCARB1-204ENST00000535005 CYP19A1P11511 503 aaPredicted RBP15.72■□□□□ 0.11
SCARB1-204ENST00000535005 EIF2S2P20042 333 aaKnown RBP15.72■□□□□ 0.11
SCARB1-204ENST00000535005 ITPK1Q13572 414 aa15.72■□□□□ 0.11
SCARB1-204ENST00000535005 SLC27A3Q5K4L6 730 aa15.72■□□□□ 0.11
SCARB1-204ENST00000535005 TJP1Q07157 1748 aa15.71■□□□□ 0.11
SCARB1-204ENST00000535005 LAMB4A4D0S4 1761 aa15.71■□□□□ 0.11
SCARB1-204ENST00000535005 HMGB2P26583 209 aaKnown RBP15.71■□□□□ 0.11
SCARB1-204ENST00000535005 MRPL50Q8N5N7 158 aaKnown RBP15.71■□□□□ 0.1
SCARB1-204ENST00000535005 DBF4Q9UBU7 674 aaPredicted RBP15.71■□□□□ 0.1
SCARB1-204ENST00000535005 CCNL1Q9UK58 526 aaPredicted RBP15.71■□□□□ 0.1
SCARB1-204ENST00000535005 NOP58Q9Y2X3 529 aaKnown RBP15.71■□□□□ 0.1
SCARB1-204ENST00000535005 PDIA6Q15084 440 aa15.7■□□□□ 0.1
SCARB1-204ENST00000535005 STK31Q9BXU1 1019 aa15.7■□□□□ 0.1
SCARB1-204ENST00000535005 DDX21Q9NR30 783 aaKnown RBP eCLIP15.7■□□□□ 0.1
SCARB1-204ENST00000535005 RGPD3A6NKT7 1758 aaPredicted RBP15.7■□□□□ 0.1
SCARB1-204ENST00000535005 RGPD4Q7Z3J3 1758 aa15.7■□□□□ 0.1
SCARB1-204ENST00000535005 BCAR3O75815 825 aa15.69■□□□□ 0.1
SCARB1-204ENST00000535005 TXNRD1Q16881 649 aa15.69■□□□□ 0.1
SCARB1-204ENST00000535005 PROM2Q8N271 834 aa15.69■□□□□ 0.1
SCARB1-204ENST00000535005 SMC4Q9NTJ3 1288 aa15.69■□□□□ 0.1
SCARB1-204ENST00000535005 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
SCARB1-204ENST00000535005 DEKP35659 375 aaKnown RBP15.68■□□□□ 0.1
SCARB1-204ENST00000535005 SF3B2Q13435 895 aaKnown RBP15.68■□□□□ 0.1
SCARB1-204ENST00000535005 RC3H1Q5TC82 1133 aaKnown RBP15.68■□□□□ 0.1
SCARB1-204ENST00000535005 NECTIN2Q92692 538 aa15.68■□□□□ 0.1
SCARB1-204ENST00000535005 CHPF2Q9P2E5 772 aa15.68■□□□□ 0.1
SCARB1-204ENST00000535005 TCERG1O14776 1098 aaKnown RBP15.68■□□□□ 0.1
SCARB1-204ENST00000535005 A1BGP04217 495 aa15.68■□□□□ 0.1
SCARB1-204ENST00000535005 LINC00116Q8NCU8 138 aa15.68■□□□□ 0.1
SCARB1-204ENST00000535005 CAMKK2Q96RR4 588 aa15.68■□□□□ 0.1
SCARB1-204ENST00000535005 LRRC4BQ9NT99 713 aa15.68■□□□□ 0.1
SCARB1-204ENST00000535005 HYPKQ9NX55 129 aa15.68■□□□□ 0.1
SCARB1-204ENST00000535005 RNF123Q5XPI4 1314 aa15.67■□□□□ 0.1
SCARB1-204ENST00000535005 CNTNAP4Q9C0A0 1308 aa15.67■□□□□ 0.1
SCARB1-204ENST00000535005 NBPF26B4DH59 902 aa15.67■□□□□ 0.1
SCARB1-204ENST00000535005 NBPF14Q5TI25 921 aa15.67■□□□□ 0.1
SCARB1-204ENST00000535005 NBPF10Q6P3W6 841 aaKnown RBP15.67■□□□□ 0.1
SCARB1-204ENST00000535005 INTS5Q6P9B9 1019 aaKnown RBP15.67■□□□□ 0.1
SCARB1-204ENST00000535005 LRP10Q7Z4F1 713 aa15.67■□□□□ 0.1
SCARB1-204ENST00000535005 NBPF15Q8N660 670 aa15.67■□□□□ 0.1
SCARB1-204ENST00000535005 COL5A3P25940 1745 aaPredicted RBP15.67■□□□□ 0.1
SCARB1-204ENST00000535005 KIF16BQ96L93 1317 aa15.66■□□□□ 0.1
SCARB1-204ENST00000535005 CACNA1FO60840 1977 aa15.66■□□□□ 0.1
SCARB1-204ENST00000535005 CRKLP46109 303 aaKnown RBP15.66■□□□□ 0.1
SCARB1-204ENST00000535005 BAG6P46379 1132 aa15.66■□□□□ 0.1
SCARB1-204ENST00000535005 BCL2L13Q9BXK5 485 aa15.66■□□□□ 0.1
SCARB1-204ENST00000535005 CCDC87Q9NVE4 849 aa15.66■□□□□ 0.1
SCARB1-204ENST00000535005 RREB1Q92766 1687 aa15.66■□□□□ 0.1
SCARB1-204ENST00000535005 KCNQ4P56696 695 aa15.66■□□□□ 0.1
SCARB1-204ENST00000535005 PROSER3Q2NL68 480 aa15.66■□□□□ 0.1
SCARB1-204ENST00000535005 IL6STP40189 918 aaPredicted RBP15.65■□□□□ 0.1
SCARB1-204ENST00000535005 IRX6P78412 446 aaPredicted RBP15.65■□□□□ 0.1
SCARB1-204ENST00000535005 ARHGAP45Q92619 1136 aa15.65■□□□□ 0.1
SCARB1-204ENST00000535005 ZBTB1Q9Y2K1 713 aa15.64■□□□□ 0.09
SCARB1-204ENST00000535005 TAF1LQ8IZX4 1826 aa15.64■□□□□ 0.09
SCARB1-204ENST00000535005 PTPRCP08575 1304 aa15.64■□□□□ 0.09
SCARB1-204ENST00000535005 IPO8O15397 1037 aaKnown RBP15.64■□□□□ 0.09
SCARB1-204ENST00000535005 ANXA1P04083 346 aa15.64■□□□□ 0.09
SCARB1-204ENST00000535005 EIF5P55010 431 aaKnown RBP15.64■□□□□ 0.09
SCARB1-204ENST00000535005 EN1Q05925 392 aaPredicted RBP15.64■□□□□ 0.09
SCARB1-204ENST00000535005 G2E3Q7L622 706 aa15.64■□□□□ 0.09
SCARB1-204ENST00000535005 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.64■□□□□ 0.09
SCARB1-204ENST00000535005 UPF1Q92900 1129 aaKnown RBP eCLIP15.64■□□□□ 0.091e-7■□□□□ 10.5
SCARB1-204ENST00000535005 NOB1Q9ULX3 412 aaKnown RBP15.64■□□□□ 0.09
SCARB1-204ENST00000535005 MYL6BP14649 208 aa15.63■□□□□ 0.09
SCARB1-204ENST00000535005 FLIIQ13045 1269 aa15.63■□□□□ 0.09
SCARB1-204ENST00000535005 ILDR2Q71H61 639 aa15.63■□□□□ 0.09
SCARB1-204ENST00000535005 PHAXQ9H814 394 aaKnown RBP15.63■□□□□ 0.09
SCARB1-204ENST00000535005 MYH14Q7Z406 1995 aaKnown RBP15.62■□□□□ 0.09
SCARB1-204ENST00000535005 RPS6KA4O75676 772 aa15.62■□□□□ 0.09
SCARB1-204ENST00000535005 CANXP27824 592 aaKnown RBP15.62■□□□□ 0.09
SCARB1-204ENST00000535005 RRP1P56182 461 aaKnown RBP15.62■□□□□ 0.09
SCARB1-204ENST00000535005 EZH2Q15910 746 aaKnown RBP15.62■□□□□ 0.09
SCARB1-204ENST00000535005 C4BP0C0L5 1744 aa15.62■□□□□ 0.09
SCARB1-204ENST00000535005 ANP32AP39687 249 aaKnown RBP15.61■□□□□ 0.09
SCARB1-204ENST00000535005 PIP4K2AP48426 406 aaPredicted RBP15.61■□□□□ 0.09
SCARB1-204ENST00000535005 ZKSCAN2Q63HK3 967 aa15.61■□□□□ 0.09
SCARB1-204ENST00000535005 DEFB132Q7Z7B7 95 aa15.61■□□□□ 0.09
SCARB1-204ENST00000535005 ATF7IPQ6VMQ6 1270 aa15.61■□□□□ 0.09
SCARB1-204ENST00000535005 COPS6Q7L5N1 327 aa15.61■□□□□ 0.09
SCARB1-204ENST00000535005 XAGE3Q8WTP9 111 aa15.61■□□□□ 0.09
SCARB1-204ENST00000535005 FRAT1Q92837 279 aaPredicted RBP15.61■□□□□ 0.09
SCARB1-204ENST00000535005 API5Q9BZZ5 524 aaKnown RBP15.61■□□□□ 0.09
SCARB1-204ENST00000535005 DDX58O95786 925 aaKnown RBP15.59■□□□□ 0.09
SCARB1-204ENST00000535005 AKT1S1Q96B36 256 aa15.59■□□□□ 0.09
SCARB1-204ENST00000535005 AK7Q96M32 723 aa15.59■□□□□ 0.09
SCARB1-204ENST00000535005 A0A087WZG4 1122 aa15.59■□□□□ 0.09
SCARB1-204ENST00000535005 MS4A1P11836 297 aa15.59■□□□□ 0.09
SCARB1-204ENST00000535005 FKBP5Q13451 457 aaPredicted RBP15.59■□□□□ 0.09
SCARB1-204ENST00000535005 PDE3AQ14432 1141 aa15.59■□□□□ 0.09
SCARB1-204ENST00000535005 B4GALNT3Q6L9W6 998 aa15.59■□□□□ 0.09
SCARB1-204ENST00000535005 KSR2Q6VAB6 950 aa15.59■□□□□ 0.09
SCARB1-204ENST00000535005 RTCBQ9Y3I0 505 aaKnown RBP15.59■□□□□ 0.09
SCARB1-204ENST00000535005 GNPATO15228 680 aa15.58■□□□□ 0.08
SCARB1-204ENST00000535005 PLIN1O60240 522 aa15.58■□□□□ 0.08
SCARB1-204ENST00000535005 TRIM27P14373 513 aa15.58■□□□□ 0.08
SCARB1-204ENST00000535005 ADRA2BP18089 450 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms